| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,039,635 | C→T | 14.2% | G11D (GGC→GAC) | etk ← | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,039,635 | 0 | C | T | 14.2% | 727.1 / 92.3 | 254 | G11D (GGC→GAC) | etk | tyrosine‑protein kinase, role in O‑antigen capsule formation |
| Reads supporting (aligned to +/- strand): ref base C (119/99); new base T (22/14); total (141/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
GAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGATCCGGGA > CP009273/1039486‑1039783 | agTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGcc > 1:2386621/1‑150 (MQ=255) gTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCt > 2:1030373/1‑150 (MQ=255) gTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCt > 2:1342013/1‑150 (MQ=255) tCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCtggt < 1:184346/150‑1 (MQ=255) cTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtg < 1:4758821/150‑1 (MQ=255) tGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCtggtgg > 1:243942/1‑150 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGc > 2:2574512/1‑150 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGc > 2:3095701/1‑150 (MQ=255) gCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGc > 1:4702796/1‑150 (MQ=255) ccTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCg > 2:255269/1‑150 (MQ=255) ccTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCg > 2:1920985/1‑150 (MQ=255) gATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAt > 2:1865941/1‑150 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTagt > 2:4521338/1‑148 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAtt < 2:4228222/150‑1 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAtt > 2:2070254/1‑150 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAtt > 1:1260369/1‑150 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAtt > 1:1188221/1‑150 (MQ=255) aTAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGAGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTAtt > 1:1005421/1‑150 (MQ=255) tAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTc > 1:3045953/1‑150 (MQ=255) aaaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCa < 1:3873967/150‑1 (MQ=255) aaTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCat > 2:468423/1‑150 (MQ=255) aTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCata < 1:1006114/150‑1 (MQ=255) aTTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCata < 1:2383131/150‑1 (MQ=255) tGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAtt < 1:292779/150‑1 (MQ=255) tGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAtt > 1:467770/1‑150 (MQ=255) tGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAtt < 2:238079/150‑1 (MQ=255) ggTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAttt < 2:574050/150‑1 (MQ=255) gtgtGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATAtttt > 2:2535726/1‑150 (MQ=255) gtgtGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATAtttt > 1:2232907/1‑150 (MQ=255) tgtgCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAttttt > 1:32023/1‑150 (MQ=255) tgtgCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATAttttt > 1:31478/1‑150 (MQ=255) gtgCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTa > 2:4415810/1‑150 (MQ=255) tgCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAg > 1:55073/1‑150 (MQ=255) gCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGt > 1:3616597/1‑150 (MQ=255) aGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATc < 2:3820790/150‑1 (MQ=255) aGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATc < 2:3820839/150‑1 (MQ=255) gCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCg < 2:3244460/150‑1 (MQ=255) aGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTAt < 2:4581464/150‑1 (MQ=255) tAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTAttt < 2:1077725/150‑1 (MQ=255) aaGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCCGACGACGCCGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTAtttt > 2:927929/1‑150 (MQ=255) aaGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTAtttt > 1:2894575/1‑150 (MQ=255) aGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTta > 1:2252356/1‑150 (MQ=255) aGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTta > 1:1546774/1‑150 (MQ=255) gCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTtat > 2:2277077/1‑150 (MQ=255) aGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTCTTCATATTTTTAGTTGTCATCGTATTTTATAAACt > 1:877183/1‑150 (MQ=255) aGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTa < 2:4745843/150‑1 (MQ=255) aGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTa < 2:2180651/150‑1 (MQ=255) cGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTAcc < 1:4415810/150‑1 (MQ=255) cGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTAcc > 2:2866917/1‑150 (MQ=255) gTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCg < 2:3189007/150‑1 (MQ=255) gAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGGTGTCATCGTATTTTCTAAACTCAAATTACCGGc > 1:1743757/1‑150 (MQ=255) aTAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTg > 1:2481297/1‑150 (MQ=255) gCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGccc > 2:3996530/1‑150 (MQ=255) cTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCa > 2:667107/1‑150 (MQ=255) ataataAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTc < 1:3377680/150‑1 (MQ=255) aataaACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCt < 1:2432002/150‑1 (MQ=255) aaaCTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGAc < 2:539535/150‑1 (MQ=255) aaCTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACt > 1:3532650/1‑150 (MQ=255) cTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTgg < 2:3929062/150‑1 (MQ=255) cTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTgg > 2:3895934/1‑150 (MQ=255) ttACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGgc < 2:3019785/150‑1 (MQ=255) ttACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGgc < 2:1158321/150‑1 (MQ=255) tACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGgcg < 1:728158/150‑1 (MQ=255) ggTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGgcgcgc > 1:2692514/1‑150 (MQ=255) ggTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGgcgcgc > 2:755689/1‑150 (MQ=255) gTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCt > 1:3325273/1‑150 (MQ=255) tCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATACCTGACTGGCGCGCTCCaa > 2:3264337/1‑150 (MQ=255) aTAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATa > 1:446462/1‑150 (MQ=255) aTAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTCCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATa > 2:1807607/1‑150 (MQ=255) aaCTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATAcc > 2:4384827/1‑150 (MQ=255) aaCTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATAcc > 2:2692276/1‑150 (MQ=255) aaCTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATAcc > 2:2240054/1‑150 (MQ=255) tCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTa > 1:2089227/1‑150 (MQ=255) cGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAg > 2:2041365/1‑150 (MQ=255) cGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAg > 2:817835/1‑150 (MQ=255) cGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACa > 1:2811119/1‑150 (MQ=255) aCCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATg < 1:4264695/150‑1 (MQ=255) cAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGtt > 2:4509468/1‑150 (MQ=255) aGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTc < 2:1275915/150‑1 (MQ=255) aGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTc > 1:3712937/1‑150 (MQ=255) aaGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATg > 1:1092397/1‑150 (MQ=255) aaGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATg > 2:2415795/1‑150 (MQ=255) aGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTc > 1:3166862/1‑150 (MQ=255) gatcgatcTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTcc < 2:306176/150‑1 (MQ=255) atcgatcTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCt > 2:1604731/1‑150 (MQ=255) atcTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACt < 1:69991/150‑1 (MQ=255) atcTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACt < 1:70017/150‑1 (MQ=255) tctcATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACtt < 1:861761/150‑1 (MQ=255) ctcATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACttt < 2:2850029/150‑1 (MQ=255) tcATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACtttt < 2:3719534/150‑1 (MQ=255) cATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTa < 2:23202/150‑1 (MQ=255) aTTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTAc > 1:4255558/1‑150 (MQ=255) aTTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTAc > 1:1382442/1‑150 (MQ=255) ccTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAg < 2:3454199/150‑1 (MQ=255) cTGAGTGCTGTCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAgg > 1:4091059/1‑150 (MQ=255) cTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAgg > 2:1217907/1‑150 (MQ=255) gAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGa < 1:3802969/150‑1 (MQ=255) gTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGATc < 2:243353/150‑1 (MQ=255) gTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGATc < 2:243973/150‑1 (MQ=255) gctgcCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGATCCg > 2:2683777/1‑150 (MQ=255) | GAGTATCTGCCTGATAAATTGGTGTGCTTAACAGCGAGTAAGCGACAGCGATCAGCGTGAATAACGCGGTCACGCTGATAATAAACTTACGGTGATCCCATAACTCGCCGACCAGACGAAGCAGATCGATCTCATTTTCCTGAGTGCTGCCTGGTGGCGTATTCATATTTTTAGTTGTCATCGTATTTTATAAACTCAAATTACCGGCTGAGGCGCTTCGCCCATTCCTGACTGGCGCGCTCCAACATACCGTAGACATGTTCAAATGCGTCCTGACTTTTACGATAGGGATCCGGGA > CP009273/1039486‑1039783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |