| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,118,506 | A→T | 10.1% | L75Q (CTA→CAA) | yceB ← | lipoprotein, DUF1439 family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,118,506 | 0 | A | T | 10.1% | 639.3 / 8.4 | 223 | L75Q (CTA→CAA) | yceB | lipoprotein, DUF1439 family |
| Reads supporting (aligned to +/- strand): ref base A (103/90); new base T (2/26); total (105/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 224 total aligned reads displayed.
GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118357‑1118654 | gTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTa < 1:4539211/150‑1 (MQ=255) ccGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTaa < 2:2192750/150‑1 (MQ=255) gTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAAcc < 2:3516458/150‑1 (MQ=255) tCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCt < 2:3008156/150‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGTCTACCGAACAGGGAGGTAATGTCCAGATTTGCGTCTCCGGGTAGGGTaaacat > 1:2507710/1‑146 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt < 1:799201/150‑1 (MQ=255) cGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCtt < 1:3229758/150‑1 (MQ=255) gCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTGTGACTACCCAACACGGGGGTCATGTCCAGATTGGCGTCTCCCGGTAGGGTAACCATa > 1:1263385/1‑150 (MQ=255) gCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTa < 2:3798984/150‑1 (MQ=255) aTCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTTTTTCTAACCAAAACGGTGTTGATTTACAGATTTGGGGGTCCGGGTTGGGTTACCATAtt > 1:3665743/1‑150 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTTACTACCGAACAGGGAGTTCATGTGCAGATTTGGGTCTACGGTTAGGGTAACCTTATTCg > 1:3412858/1‑150 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCg < 2:2620155/150‑1 (MQ=255) cGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCAAGTCCAGATTGGCGTCTCCGGGTAGGGTAACCATATTCg > 1:1889187/1‑150 (MQ=255) gACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCgg > 1:1803355/1‑150 (MQ=255) cACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGctc < 1:3650838/150‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt < 2:791593/150‑1 (MQ=255) cTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACAACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCtt > 1:4873049/1‑150 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcg < 2:4732555/150‑1 (MQ=255) tCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTcg < 1:2061505/150‑1 (MQ=255) tctcTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGAc > 2:4870561/1‑150 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAt > 2:3631078/1‑150 (MQ=255) tttCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAt > 2:1927051/1‑150 (MQ=255) tCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAttt < 1:3385659/150‑1 (MQ=255) cAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTg < 2:4816917/150‑1 (MQ=255) gAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCt > 2:2643710/1‑150 (MQ=255) aaGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTTGCGTCTCCGGTTAGGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTg > 1:773975/1‑150 (MQ=255) aTCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTc > 2:2830782/1‑150 (MQ=255) gCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAgg > 2:1137978/1‑150 (MQ=255) aCCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGtt < 1:1398811/150‑1 (MQ=255) aCCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCGAACAGGGTGTTCATGTCCAGATTTGCGTCTCCGGTTATGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGtt > 1:2416277/1‑150 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTATGGTAACCTTATTAGGCTCTTCGCGACCAATTTGGCTGGTAAGGttt > 2:2112828/1‑150 (MQ=255) ccTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGttt < 1:2680042/150‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTg < 2:4217118/150‑1 (MQ=255) cTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTACCCAACAGGGAGTTCATTTCCAGATTGGCGTCTACGGTTAGGGTAAACTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGtttt > 1:1967756/1‑149 (MQ=255) ttttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGGGGCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAAATTTGCTGGTGAGGTTTGTc > 1:3940553/1‑150 (MQ=255) ttCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACAACCGAACAGGGCGGTCAATTCCAGATTGGCGGCTCCGGGTAGGGTAACCGTATTCGGCTCTTCGCGACCAATTTGGCTGGTCCGGTTTGTCAg > 2:3655196/1‑150 (MQ=255) tCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTAGCGACCAAATTTGCGGGTCAGGTTTGTCAGa > 2:3254003/1‑150 (MQ=255) cTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGCTTTGCGTCTACGGTTAGGGTAACCTTATTAGGCGCTTAGCGACCAAATTGGCTGGTCAGGTTTTTAAGaa > 2:3296153/1‑150 (MQ=255) tttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAAc < 2:3347607/150‑1 (MQ=255) ttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGGAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACa < 2:4614837/150‑1 (MQ=255) ttATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTATGACTAACCAACAGGGAGTTCATGTCCACATTTGCGTCTCCCGTTATGGTAACCTTATTAGGCTCTTCGCGACCAAATTTGCTGGTCAGGTTTGTGAGAACa > 1:2128963/1‑150 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:4713680/150‑1 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:6712/150‑1 (MQ=255) aaCACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATgg < 1:1330242/150‑1 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTc < 2:4275254/150‑1 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTc < 1:1141554/150‑1 (MQ=255) gggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTc < 2:4080718/150‑1 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTTTCAGAACAATATGGGCGTCa > 2:4421799/1‑150 (MQ=255) ggCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCa < 2:4497363/150‑1 (MQ=255) aGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGcc < 2:611548/150‑1 (MQ=255) gcTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTGATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACg > 2:496868/1‑150 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTTGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGcc > 2:691718/1‑150 (MQ=255) tttCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGGTAGGGTAACCTTATTCGGCTCTTAGCGACCAATTTGGCGGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGcc > 2:1022046/1‑150 (MQ=255) cTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCGGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTaa > 2:3513623/1‑150 (MQ=255) cAGTTTCATGGTCGCTTTCTGCCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAAcc < 2:3892060/150‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACTGGGTGTTCATGTCCTGATTGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCTACCAATTTGGCTGTTCAGGTTGGTCAGAAAATTATGGGGGACTGCCACGCCGGGTAAACCg < 2:160255/150‑1 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCg > 2:2001472/1‑150 (MQ=255) aGTTTCATGGTCGCTTTCTGACTACCCAACACGGAGTTCAAGTCCATATTGGCGTCTACCGTTAGGGTAACCATATTAGGCTCTTCGCGACCAAATTTGCTGGGCACGTTTGTCAGAACAAAATTGGCGTCAGCCACGCCGGGTAAACCg > 2:883402/1‑150 (MQ=255) aGTTTCATGGTCGCTTTCTGACAAACGAACAGGGAGTTAATGTACAGATTTGCGTCTCCGGGTAGGGTAACCATATTAGGCTCTTAGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATTGGCGTCAGCCACGCCCGGTAAAcag > 2:2432384/1‑148 (MQ=255) ttCATGGTCGCTTTCTGACTACCGACCAGGGAGTTCATTTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCACCCACGCCGGGTAAACCGata < 2:144089/150‑1 (MQ=255) ttCAGGGTCGCTTTCTGACTCCCGACCAGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATAGGGGCGTCAGCCACGCCGGGTAAACCGata < 2:3100091/150‑1 (MQ=255) tCATGGTCGCTGTCTGACTCCCCAACCGGGTGTTCATGACCCGATTGGGGTCGCCGGTAAGGGTAACCTTATTCGGCTCTTCGCGACAATTTTGGCTGGTCAGGTTTGACATAACAATATGGGCGTCACCCACGCCGGGTAAACCGatat < 2:4754720/150‑1 (MQ=255) cATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATc < 2:3994327/150‑1 (MQ=255) cATGGTCGCTTTCTGACAACCGAACTGGGATTTCATGTCCAGATTGGCGTCTCCGGTTCGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGTTATGTTTTTTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATc < 1:4434603/150‑1 (MQ=255) tCGCTTTCTGACTACCGAACCGGGAGTTCATGTCCAGATGGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTg < 2:338467/150‑1 (MQ=255) tCGCTTTCTGACTACCGAACAGGGATTTCATGTCCAGTTTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTATTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTg < 1:3579526/150‑1 (MQ=255) tCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTg < 2:4684574/150‑1 (MQ=255) tCGATTTCTGACTACCGAACTGGGTGTTCTTGTCATGTTGGGCGTCTCCGTTTTGGTTAAAGTTATTCGGCTCTTCGCGACAATTTTGGGGGGTCTGGTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTg < 1:3104973/150‑1 (MQ=255) gCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTgag > 1:3592322/1‑150 (MQ=255) ttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaaa > 2:3817911/1‑150 (MQ=255) ttCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGaaa > 1:3206371/1‑150 (MQ=255) ctatctgAACTGGGATTTCATGTCCATTTTGGGGTCTCCGGTTTGGGTAACCTTTTGCGGCTCTTCGCGACCATTTTGGGTGGTCTGGTTTGTCAGAAAAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAattatt < 2:1605645/144‑1 (MQ=255) aCTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAGCCGATATCTTTTGAGAAattatt > 1:152045/1‑150 (MQ=255) aCCGAACTGGGAGTTCTTGTCCTGATTGGGGTCTCCGGTTTGGGTAACATTATTCGGCTCTTCGCGACCATTTTGGGTGGTCTGGTTTGTCAGAACAATTTGGGGGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 1:4366711/150‑1 (MQ=255) aCCGAACAGGGTGTTCATGTCCAGTTTGGCGTCTCCGTTTAGGGTAACCTTATTCGGCTCTTCGCGACAAATTTGGCTGGTCAGTTTTTTAATAACAATATGGGCGACACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg < 1:3147404/150‑1 (MQ=255) aCCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATg > 1:2360898/1‑150 (MQ=255) ccGAACAGGGAGTTCTTGTCCAGATTGGCGTCGCCGGTTAGGGTAACCTTTTTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGt < 2:4294426/150‑1 (MQ=255) cGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGtt > 2:2310883/1‑150 (MQ=255) gAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAAttattagatcg > 1:1605645/1‑145 (MQ=255) gAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGttt > 2:3973931/1‑150 (MQ=255) aaCAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTc > 2:1325653/1‑150 (MQ=255) cAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGc > 1:3897738/1‑150 (MQ=255) aGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCa > 1:3815639/1‑150 (MQ=255) tgTTCTTGTCCTGATGGGCGTCTCCGGTTTGGGTAACCTTTTTCGGCTCTTCGCGACCAATTTGGCTGGTCTGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg < 1:1137978/149‑1 (MQ=255) aGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCg < 2:1805053/150‑1 (MQ=255) cATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg > 1:4451084/1‑150 (MQ=255) attGTCCAGTTTGGGGTATCCGGTTTGGTTAACCTTATGCGGCTCTTCGCTACAATTTTGGCTGGTCTGTTTTGTCATAAAAATTTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTg < 2:828889/148‑1 (MQ=255) ttGTCCAGTTGGGGGTTTCGGTTTTGGGTAACTTTTTGCGGCTCTGCGCTACAATTTGGGGGGGTCTGGTTTTTAATAAAAATTGGGGCGTCACCCACGCCGGTTAAACCGATATCTTTTGATAAATTATTATGTTTCGCAAGCGACTgg < 2:2021638/149‑1 (MQ=255) ctttttGGGGTCTCGGGTTTGGGTAACCTTATGCGGCTCTCGGCTACCATTTTGGCTGGTCCGGTTTGTCATAACAATCTGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGATAAATTATTATGTTTCGCAAGCGACTGGTTAAt < 2:4147125/146‑1 (MQ=255) gATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt > 2:2368857/1‑150 (MQ=255) gATTGGCGTCGCCGTTTTGTGTAACATTATTCGGCTCTTCGCGACAATTTTGGCGGGTCAGTTTTGTCAGAAAAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAAttt < 2:2991514/150‑1 (MQ=255) aTTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTc > 1:1004635/1‑150 (MQ=255) tGGCGTCTCGGGTTGGGGTACCTTTTTTGGGACGTTCGCGACCATTTGGGGTGGTCTGGTTGGTCAGAACAATAGGGGCGCCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCtt < 2:2455792/150‑1 (MQ=255) tGGCGTCTCCGGTTTGGGTAACCTTATTCGGCTCTTCGCGACCATTTTGGCTGGTCAGGTTTGTCAGAACAATTTGGGCGTCACCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCtt < 2:1498573/150‑1 (MQ=255) tGGCGTCCCCGGTTTGGTTAACCTTTTTCGGCTCTTCGCGACCAATTTGGCGGGTCAGGTTTGTCATAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCtt < 2:1131848/150‑1 (MQ=255) ggCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTg > 2:3944185/1‑150 (MQ=255) gTCTCGGTTTTGGTTAACTTTTTTGGGAACTTCGCCACAATTTTGGCTGGTCTGGTTTTTCATAACATTATGGGCTTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc < 1:4049605/150‑1 (MQ=255) gTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTc > 2:2623437/1‑150 (MQ=255) tctcCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCg > 1:4615393/1‑150 (MQ=255) gTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATg > 1:4323626/1‑150 (MQ=255) | GTTGTACCGTCGCATCGACCACTTCCATCTCTTTCAGGAAGATCGCACCTTTTTCTTTATCAAACACGGGCAGCGCTTTCAGCTTCAGTTTCATGGTCGCTTTCTGACTACCGAACAGGGAGTTCATGTCCAGATTGGCGTCTCCGGTTAGGGTAACCTTATTCGGCTCTTCGCGACCAATTTGGCTGGTCAGGTTTGTCAGAACAATATGGGCGTCAGCCACGCCGGGTAAACCGATATCTTTTGAGAAATTATTATGTTTCGCAAGCGACTGGTTAATTTCTTGTTCGGTGATGGT > CP009273/1118357‑1118654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |