| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 68.5% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 68.5% | 236.3 / 185.0 | 196 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (25/37); new base T (43/89); total (70/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
CTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGATA > CP009273/1385861‑1386155 | tAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTtata < 1:3045533/150‑1 (MQ=255) tAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTAAAGCCCCCACCAGGGTGAGATAACA‑CAATTTCCAGATa > 2:626048/1‑150 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTg < 1:75846/150‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTGGTTGTTTAAAGCCCCCACCAGGGTGAGATAAAA‑CAATTGCCTTATACTg > 2:437438/1‑150 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACg < 2:2907373/150‑1 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACg < 1:589463/150‑1 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGATAACA‑CAAATGCCTTATACAGACg > 2:3585415/1‑150 (MQ=255) aCGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCTGGGTGAGATAACA‑CAATTTCCTtataaataag > 2:1426463/1‑144 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCTGGGTGAGATAACA‑CAATTGCCAGATACTGACggggt > 2:3474536/1‑148 (MQ=255) ggCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCCCCGGGGTGTGATAAAA‑CAAATGCCGTATAATTACGGGtt > 1:1035775/1‑150 (MQ=255) tCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTtca < 2:841855/150‑1 (MQ=255) cgccgcCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCGGGGGGTGATAAAA‑CAAATGCCGGATAATGACGGGTTtgat > 2:3249071/1‑150 (MQ=255) ccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTtcat‑ca < 1:2192766/150‑1 (MQ=255) cgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTGTTTTAAGCCCCCCCCGGGGTGAGATAAAA‑CAAATTCCTTATAATGACGGGTTTAAT‑Caa > 2:1221493/1‑150 (MQ=255) cgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCGGGGTGAGATAACA‑CAAATGCCGTATACTGACGGGTTTCAT‑Caa > 2:512806/1‑150 (MQ=255) ccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAAt < 1:2002520/150‑1 (MQ=255) ccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAAt < 2:276484/150‑1 (MQ=255) cACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTATAGCCCCCACCTCGGGGAGATAAAA‑CAAAATCCTTATACTGACAGGTTTAAT‑aaaaaa > 1:1041040/1‑148 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAACGCCCCCACCAGGGGGGGATAACA‑CAATTTGCAGATACTGACGGGGTTCAT‑AAAAATTTg > 1:286676/1‑150 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTTCCTTATACTTACGGGTTTCAT‑CAAAttttt > 2:3851635/1‑149 (MQ=255) tttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTTAAGCCCCCCCCCGGGGGAGATAACA‑CAAATGCCTGATAATGACGGGTTTCAT‑CAAAATTTg > 1:2716385/1‑150 (MQ=255) cACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAg < 1:3668812/150‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTTAAGCCCCCCCCAGGGGGGGATAACA‑CAAATTCCTGTTACATAAGGGGTTAATACAAAtttggtgg > 1:4861013/1‑145 (MQ=255) cTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCCGGGGGGGGTAACA‑CAAATTCCAGAAACAGACGGGTTTAAT‑CAAAAATTGGTgggc > 1:2583611/1‑149 (MQ=255) gATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAAt > 2:1451974/1‑150 (MQ=255) aTAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCACCGGGGTGAGATAACA‑CAATTGCCATATAAATACGGGTTTAAT‑AAAATTTTTGAGGGAAATa > 2:2454436/1‑150 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCAGGGTGTGATAACA‑CAAATTCCGTAAAATGACGGGGTTCAT‑AAAATTTTGTAGGGTAATat > 1:3533426/1‑149 (MQ=255) aaGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTTAAGCCCCCCCCCCGGGGTGGTAACA‑CAAATTCCGGAGAAAGTCGGGTTTGAT‑CAAAATTTTGTGGGGAATatt > 1:3302136/1‑148 (MQ=255) aGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTCTTTAACGCCCCCACCAGGGTGAGATAAAA‑CAAATTACTTATACTTACGGGTTTAAT‑CAAAATTTGGATGGTAATAGAt > 2:256300/1‑150 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATc < 2:3832537/150‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATc < 1:3123349/150‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGGTGTTTAAAGCCCCCACCAGGGGGTGGTAAAA‑CAATATCCTGATAAAGTAGGGGTTCTT‑GAAAAATTTGTGGGTAATAGAta > 1:1714404/1‑149 (MQ=255) aTGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCa < 2:976690/150‑1 (MQ=255) aTGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCa < 2:3421161/150‑1 (MQ=255) tGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCAc < 1:4495785/150‑1 (MQ=255) aTAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCAACTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGa > 2:1169320/1‑150 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGAc < 2:1996625/150‑1 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAAAA‑CAATTGCCAGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGAcc > 2:3969358/1‑149 (MQ=255) aGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACaa < 2:4567955/150‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAaga < 1:3932959/150‑1 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCCCCGGGGGGTGATAACA‑CAAATTCCGTATAAAGACGGGTGTCAT‑CAAATTTTGGGGGGTAAAAGATCAAAGAAGAAAAaga > 1:1379533/1‑150 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACG‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 2:1222421/150‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 1:3184684/150‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 1:4509741/150‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAACCCCCCCCAGGGGGAGATAAAA‑CAAATGGCTTATACTGAAGGGTTTAAT‑GAAATTTTTGTGGGGAATATATAACAGCAGACAAAgaga > 1:347581/1‑150 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATACCA‑ATATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGTCAAAgaga < 2:4372060/150‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAgaga < 2:3748300/150‑1 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCAGGGGGTGGTAACA‑CAAATTCCGTATACATACCGGGTTAAA‑AAAATTTTGTTGGGAAAAAGATAACAGCAGACAAAgagaa > 1:3818004/1‑149 (MQ=255) aCAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGtt < 2:2643780/150‑1 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTg < 2:3213382/150‑1 (MQ=255) cAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTAAAGCCCCCCCCTGGGTGAGATAACA‑CCAATTCCTTATACAGTCGGGGTTCAT‑CAAAATTTTGAGGGAAATAGATAACTGCCGACAAAGAGAttgggg > 2:1719912/1‑145 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCAGGGTGAGATAAAA‑AAAATGCCAGATACAGACGGGTTTCAT‑CAAAATTTTGTGGGGAATAGATAACAGCACACAAAAAGATGGGTggg > 1:3892121/1‑149 (MQ=255) aTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGat < 1:581648/150‑1 (MQ=255) tCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatt < 2:2949320/150‑1 (MQ=255) tCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatt < 1:2908691/150‑1 (MQ=255) tCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTTTGTTTAACGCCCCCCCCAGGGGGAGATAAAA‑CAAAATACTTATAAAGAAGGGTTTAAT‑CAAATATTTGAGGGGAATATATAACAGAAGACAAAGAGAGGGGTggggt > 1:2577256/1‑147 (MQ=255) ccTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCAGGGTGATATAAAACCAATTACGT‑AAAAAGAAGGGGTTAAT‑CAAATTTTTTGGGGAAATATATAACAGCAGACCAAGAGATGGTTGGgttat > 2:1671366/1‑150 (MQ=255) cTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattatt < 1:2151429/150‑1 (MQ=255) cTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattatt < 1:773515/150‑1 (MQ=255) ttttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg < 1:2330712/150‑1 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCt < 1:3500168/150‑1 (MQ=255) ccGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt < 1:12937/150‑1 (MQ=255) cGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTATTTAAAGCCCCCACCAGGGTGAGATAAAA‑AAAATTCCAGATAATTAAGGGTTTAAT‑AAAATTTTGTTGGGAAATATATAACAGCATAAAAAGAAAAGGTTGGattttttatttt > 2:3292630/1‑144 (MQ=255) gCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTa < 1:1077252/150‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTg < 2:1913509/150‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTg < 2:2103638/150‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATATATCACAGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTg > 2:4405765/1‑150 (MQ=255) ttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTg < 2:4231598/150‑1 (MQ=255) ttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTg < 1:1462810/150‑1 (MQ=255) ggCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAc < 1:1642171/150‑1 (MQ=255) ggCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGAc < 1:3325188/150‑1 (MQ=255) aTAGGTTCCGGCCGTTTGTTCTTTCACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACttt < 2:3432397/150‑1 (MQ=255) tAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTtta < 1:907049/150‑1 (MQ=255) ttCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTtattat < 1:4843404/150‑1 (MQ=255) tCCGGCCGTTTTTTCTTTAAACCCCCCACCAGGGTTAGATAAAA‑CAAATTCCATATAATTACGGGTTTAAT‑CAAATTTTGGAGGGAAAAATATCACAGCAGACAAAGATATGGTTTGATTATTGCTGTTAGTGAAACTGACattattatt > 2:2360850/1‑150 (MQ=255) tCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTattatt < 1:626048/150‑1 (MQ=255) tCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTattatt < 1:4727063/150‑1 (MQ=255) ggCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATGGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcat < 2:1655897/150‑1 (MQ=255) ccGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatca < 2:1554654/150‑1 (MQ=255) cTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTcc < 1:1081021/150‑1 (MQ=255) ttAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTc < 2:4612221/150‑1 (MQ=255) tAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa < 2:2264160/150‑1 (MQ=255) cccccACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAg > 2:3104435/1‑150 (MQ=255) ccACCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTg < 2:240839/150‑1 (MQ=255) aCCTGGGTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTc < 1:3575794/150‑1 (MQ=255) gggTGAGATAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGtt < 1:3134933/150‑1 (MQ=255) ggTGAGATAACA‑CAATTGCCTTAGACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTc < 2:873403/150‑1 (MQ=255) gagaTAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt < 2:3506305/150‑1 (MQ=255) agaTAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGttt < 1:2626868/150‑1 (MQ=255) agaTAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGttt < 2:758342/150‑1 (MQ=255) aTAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTa > 2:357832/1‑150 (MQ=255) aTAACA‑CAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTa < 2:4040195/150‑1 (MQ=255) aca‑cAATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACg < 2:3533426/150‑1 (MQ=255) caATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGtt < 1:437315/150‑1 (MQ=255) caATTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGtt < 1:723477/150‑1 (MQ=255) aaTTGCCTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 1:3851635/150‑1 (MQ=255) gCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATCGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATAATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGa > 2:2124918/1‑150 (MQ=255) ccTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGat > 1:4768365/1‑150 (MQ=255) ccTTATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGat < 1:1857436/150‑1 (MQ=255) cTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGata < 2:3302608/150‑1 (MQ=255) | CTAACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACA‑CAATTGCCTGATACTGACGGGTTTCAT‑CAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTGATA > CP009273/1385861‑1386155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |