| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,556,659 | A→T | 22.3% | V27E (GTA→GAA) | ddpA ← | D‑ala‑D‑a la transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,556,659 | 0 | A | T | 22.3% | 508.0 / 157.8 | 229 | V27E (GTA→GAA) | ddpA | D‑ala‑D‑a la transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (77/101); new base T (19/32); total (96/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.09e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TGAGCCTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCAGCGAG > CP009273/1556514‑1556805 | tGAGCCTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTTTTAACGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTcggc > 1:3182812/1‑150 (MQ=255) gAGCCTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTAcggcg < 1:3868568/150‑1 (MQ=255) gCCTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACggcggc < 2:1768675/150‑1 (MQ=255) cTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTGATTATGTATTTTTAACCCCGGGGGGGGGGGTTTTTGATCGGCGGCCGTAACAAACAACACCAAATCTTTTGGTTAGgcggcgg > 1:1258195/1‑149 (MQ=255) tttATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTAACGCCGGGGCGAGGGTTTGTGGATCGGCGGCCGTAACAATAACCACCATATATTTTGGTACCgcggcggg > 1:2641479/1‑148 (MQ=255) aTCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTAACAATCACCAGCATATCTTTTGGTACGGCGGCGTgcgc > 2:3213322/1‑150 (MQ=255) cACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCaa > 2:3954865/1‑150 (MQ=255) cACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTGATTATCTATTTTTACCCCCGGGTCGAGGGGTTGTGGTTAGGGGGCCATACCAAACAACCCCCAATCTGTTTGTAACGCGGCCGGCGCaa > 1:2966916/1‑150 (MQ=255) ccgtccgtTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTTTTAACCCCGGGTCGAGGGGTTGTGGATCGGCGGCCGTAACAAACACCACCAAAACATTTGGTAAGGCGGCGTgcgccccc > 1:3375177/1‑146 (MQ=255) ccgtccgtTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAAcc < 2:1946249/150‑1 (MQ=255) gtccgtTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCACCCgg > 2:2359064/1‑150 (MQ=255) gtTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATATATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCGTAACAAAAACCACCATATCTTTTGGTACGGCGGCGTGCGCAACCCGGaaa > 1:3875699/1‑150 (MQ=255) ttttGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAAt < 2:4337956/150‑1 (MQ=255) gTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTtgt < 1:427733/150‑1 (MQ=255) tACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTtgtg < 1:374743/150‑1 (MQ=255) aCTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGGTACCGCCGGGTCGAGGGGTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGCAATTTGTgg > 2:3860731/1‑150 (MQ=255) gAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCaa < 1:1836678/150‑1 (MQ=255) aaCCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTTTATATTTTTTACCCCGGGGCGTGGGTTTTTTGATAGGCGGCCATACCAAACACCACCAAAAAATTTTGTACGGCGGCGTGCGCAACCCGGACATTTTTGGCAAg > 1:4583714/1‑150 (MQ=255) aCCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCTTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAgg < 2:3098878/150‑1 (MQ=255) aCCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAgg < 1:3106467/150‑1 (MQ=255) aCCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAgg < 1:2605863/150‑1 (MQ=255) aGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACg > 2:2715840/1‑150 (MQ=255) gCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGGGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAgcg > 2:2312724/1‑150 (MQ=255) gATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATATATTGTTAACGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTTGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGa > 2:2342924/1‑150 (MQ=255) gATAAGACGGGTAGGTCACTGTCCAGTCGTGATTATATATTGTTACCGCCGGGTCGAGGGGTTGTGGTTAGGCGGCCGTAACAATCACCAGCATATCTTTTTGTAAGGCGGCGGGCGCAACCCGGACATTTGTTGCAAGGACGAGCGCGa > 1:1383116/1‑150 (MQ=255) tAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGc < 1:613086/150‑1 (MQ=255) aGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCaa < 2:495162/150‑1 (MQ=255) gggTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAAtgtg < 2:3387858/150‑1 (MQ=255) tAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGa < 2:1516879/150‑1 (MQ=255) tCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGaa < 2:4765375/150‑1 (MQ=255) tCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGaa < 1:3219269/150‑1 (MQ=255) cACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGaaa < 1:1356349/150‑1 (MQ=255) cACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGaaa < 2:4155639/150‑1 (MQ=255) aCTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAAc < 1:2322271/150‑1 (MQ=255) aCTGTCCAGTCGTGATTATCTATTGTTAACGCCGGGGCGAGGGTTTGTGGATAGGCGGCCATACCAAACAACAGCATAACTTTTTGTACGGCGGCGTGCGCAAACCGGAAAATTGTGGCAAGGACGAGCGCGAGCAAAGTGGGACGAAAc > 2:2444550/1‑150 (MQ=255) tCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGGTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGata < 2:1258116/150‑1 (MQ=255) cAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATc < 1:4082245/150‑1 (MQ=255) aGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCg < 2:3350639/150‑1 (MQ=255) gTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGa < 1:1093815/150‑1 (MQ=255) tCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGAt < 2:2696949/150‑1 (MQ=255) cGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGAtc < 1:782788/150‑1 (MQ=255) ttattaTCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGAtctc > 1:3793846/1‑150 (MQ=255) ttatCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTc > 2:1876010/1‑150 (MQ=255) tatCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCa < 2:2220875/150‑1 (MQ=255) tatCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCa > 2:4605705/1‑150 (MQ=255) atCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCAt < 1:2566624/150‑1 (MQ=255) tCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATg > 1:2835168/1‑150 (MQ=255) tCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATg < 2:2704261/150‑1 (MQ=255) cTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGa < 1:1976719/150‑1 (MQ=255) cTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGa > 1:1185521/1‑150 (MQ=255) tGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGt > 1:4672833/1‑150 (MQ=255) tACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGACACGATATCGATCTCGTCCTGACAGTTTc > 2:4128974/1‑150 (MQ=255) aCCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTcc > 1:1746703/1‑150 (MQ=255) ccgccgGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCt < 1:1394888/150‑1 (MQ=255) ccgGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGAt < 2:1312207/150‑1 (MQ=255) cgGGTCGTGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGAtt < 1:120102/150‑1 (MQ=255) cgGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGAtt < 1:860837/150‑1 (MQ=255) gggTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTa < 2:3615662/150‑1 (MQ=255) gTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAAc < 1:2712834/150‑1 (MQ=255) gTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAAc > 2:3695224/1‑150 (MQ=255) tCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACt > 1:1985090/1‑150 (MQ=255) cGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTg > 1:2298463/1‑150 (MQ=255) gAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGa > 1:4341384/1‑150 (MQ=255) aGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGAc > 2:872540/1‑150 (MQ=255) ggTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGt > 2:3047091/1‑150 (MQ=255) tttGTGGATCGGCGGCCTTACCAATCACCAGCATATCGTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAAGGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGc < 1:2068011/150‑1 (MQ=255) ttGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCt < 2:153665/150‑1 (MQ=255) aTCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGc < 1:2015445/150‑1 (MQ=255) aTCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGc < 1:2859918/150‑1 (MQ=255) cggcggCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCa > 1:1938857/1‑150 (MQ=255) ggcCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAgggg < 2:163130/150‑1 (MQ=255) ccTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGat < 2:52406/150‑1 (MQ=255) cTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGata < 1:2715840/150‑1 (MQ=255) cTTACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGata < 2:3336180/150‑1 (MQ=255) cTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGata < 1:1282091/150‑1 (MQ=255) cTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGata < 2:1439050/150‑1 (MQ=255) ttACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGatat > 1:1213498/1‑150 (MQ=255) tACCAATCACCAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGAtata > 2:3633278/1‑150 (MQ=255) aCCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaa < 2:2942286/150‑1 (MQ=255) aCCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaa < 2:2653008/150‑1 (MQ=255) aCCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaa < 2:2132948/150‑1 (MQ=255) aCCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaa < 2:4742246/150‑1 (MQ=255) cAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaaaa > 1:482889/1‑150 (MQ=255) cAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATaaaa < 1:2312709/150‑1 (MQ=255) tCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACaa > 1:4860477/1‑150 (MQ=255) cACGAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAag < 1:3317552/150‑1 (MQ=255) cACGAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAag < 1:879738/150‑1 (MQ=255) cACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAag > 1:1997208/1‑150 (MQ=255) aCCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAaga > 1:2948087/1‑150 (MQ=255) aCCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAaga < 1:2894718/150‑1 (MQ=255) ccAGCATATCTTTTGGTACGGCGGCGTGCGCACCCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAagag > 1:511657/1‑150 (MQ=255) cAGCATATCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAgaga < 2:1615062/150‑1 (MQ=255) atCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGAt > 2:4392817/1‑150 (MQ=255) tCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATc < 1:901607/150‑1 (MQ=255) tCTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATc > 2:2022343/1‑150 (MQ=255) cTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCa < 1:1491687/150‑1 (MQ=255) cTTTTGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCa < 1:3951052/150‑1 (MQ=255) cTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCa < 2:2634005/150‑1 (MQ=255) tttGGTTCGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCAGc < 1:2755388/150‑1 (MQ=255) ttGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCAGCg > 1:2620161/1‑150 (MQ=255) | TGAGCCTTTATCACCGTCCGTTTTGTACTGAACCAGCCGCTGATAAGACGGGTAGGTCACTGTCCAGTCGTTATTATCTATTGTTACCGCCGGGTCGAGGGTTTGTGGATCGGCGGCCTTACCAATCACCAGCATATCTTTTGGTACGGCGGCGTGCGCAACCGGGAAATTTGTGGCAAGGACGAGCGCGAGCAATGTGGGACGAAACGATATCGATCTCTTCATGACAGTTTCCTGATTAACTGACGTGCTGTGTGCCAGGGGATATAAAACAAGAGAATTGATCAGCGAG > CP009273/1556514‑1556805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |