| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,663,893 | C→T | 27.5% | intergenic (‑44/‑63) | ynfL ← / → ynfM | LysR family putative transcriptional regulator/putative arabinose efflux transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,663,893 | 0 | C | T | 27.5% | 320.7 / 150.7 | 190 | intergenic (‑44/‑63) | ynfL/ynfM | LysR family putative transcriptional regulator/putative arabinose efflux transporter |
| Reads supporting (aligned to +/- strand): ref base C (56/79); new base T (27/25); total (84/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01 | |||||||||||
Only 100 of 197 total aligned reads displayed.
GACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAACGC > CP009273/1663744‑1664042 | gACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAAc < 2:4146648/150‑1 (MQ=255)gACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAAc > 2:3635515/1‑150 (MQ=255) aCTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACa < 1:975371/150‑1 (MQ=255) ttAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGaataat > 2:2030886/1‑150 (MQ=255) tAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAAtt > 1:3542739/1‑150 (MQ=255) tAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAAtt > 1:3542307/1‑150 (MQ=255) ggcggTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAGTATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGAt < 1:2918592/150‑1 (MQ=255) ggcggTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGAt < 1:1896998/150‑1 (MQ=255) ggcggTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGAt > 1:3028240/1‑150 (MQ=255) gcggTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGAtt < 1:4055335/150‑1 (MQ=255) ggTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATCTTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGACTAATTCGAtttt > 2:3412551/1‑150 (MQ=255) ttGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTcc > 1:418661/1‑150 (MQ=255) tGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCt < 2:1968930/150‑1 (MQ=255) aaaTATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGAAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGAGTATTAATATATTAGACAGAACAATTCGATTTTCCTAccc > 2:1205320/1‑150 (MQ=255) aaTATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCt < 2:1302348/150‑1 (MQ=255) tatTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTAt < 2:1173220/150‑1 (MQ=255) atTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATg < 1:4274338/150‑1 (MQ=255) atTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATg < 1:3285465/150‑1 (MQ=255) cAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGtat < 2:1736087/150‑1 (MQ=255) ggCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATaa < 2:3163856/150‑1 (MQ=255) cGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGc < 1:4501828/150‑1 (MQ=255) aGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGAt < 2:2229912/150‑1 (MQ=255) gcggcgCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATc < 1:349698/150‑1 (MQ=255) gcggcgCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATc < 1:349705/150‑1 (MQ=255) cggcgCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCt < 2:2231211/150‑1 (MQ=255) ggcgCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTCTAAGCCTGATCTa > 2:882778/1‑150 (MQ=255) ggcgCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTa > 2:203311/1‑150 (MQ=255) gagcCCGAAATGCAGCTCTACCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAg < 2:3699375/148‑1 (MQ=255) cGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCata < 1:4009660/150‑1 (MQ=255) gAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCatat < 1:3627993/150‑1 (MQ=255) gAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCatat < 1:240534/150‑1 (MQ=255) gAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCatat < 1:3627987/150‑1 (MQ=255) tGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAg < 1:1631513/150‑1 (MQ=255) cAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCa < 2:2969467/150‑1 (MQ=255) acagcaacaAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTg < 2:2495270/150‑1 (MQ=255) agcaacaAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAg > 2:906698/1‑150 (MQ=255) caaAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGta > 1:3582981/1‑150 (MQ=255) caaAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGta < 1:2634342/150‑1 (MQ=255) gTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGtactac > 1:4066170/1‑150 (MQ=255) cGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACt < 1:2111398/150‑1 (MQ=255) cAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGt < 1:4617555/150‑1 (MQ=255) aGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGtt > 2:2658580/1‑150 (MQ=255) gATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTg < 2:2697986/150‑1 (MQ=255) cGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGgc < 2:1973717/150‑1 (MQ=255) gAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCATACCCTATGAATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGAGAGCCGTACTACAACTGTTGATGgcg > 1:4086384/1‑150 (MQ=255) ttCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTCTGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTcc < 1:2685047/150‑1 (MQ=255) tCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCg < 1:3726869/150‑1 (MQ=255) cAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCgg < 1:506716/150‑1 (MQ=255) cAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCgg < 1:122954/150‑1 (MQ=255) aaTATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGc < 2:333116/150‑1 (MQ=255) atatTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCa > 2:1198291/1‑150 (MQ=255) atatTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCa > 2:444168/1‑150 (MQ=255) ttCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGc < 2:3048977/150‑1 (MQ=255) ttCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGc < 2:2700991/150‑1 (MQ=255) ttCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGc < 2:3047996/150‑1 (MQ=255) tCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCg > 1:4527551/1‑150 (MQ=255) tatTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGaca > 1:1372190/1‑150 (MQ=255) tatTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGaca < 2:168901/150‑1 (MQ=255) tttAAAACATCTTATTTGAGATTATTAATTTATTAGACATAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGAAAGTTTTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACt < 2:2326817/150‑1 (MQ=255) aaaaCATCTTATTTGAGATTATTAATATATTAGACAGAAAAATTCGATTTTACTACCATATGTATAAGACTGATCTAAAGGCATATTTAGCAAGGATTTCAAGTTAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGAc > 1:3563903/1‑150 (MQ=255) aCATCTTATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACaag > 2:1433954/1‑150 (MQ=255) aCATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTACCAACCCTATGTATAAGCCTGATCTACAGGCATATTAAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTAGATGGCGCTCCGGCAAGCGACACTGACaag > 2:1693864/1‑150 (MQ=255) cATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACaagc < 1:3224399/150‑1 (MQ=255) aTCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACaagca > 2:4077928/1‑150 (MQ=255) ttATTTGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACaagcaaag > 1:2249760/1‑150 (MQ=255) ttATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACaagcaaag > 2:1375576/1‑150 (MQ=255) tttGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAt > 1:4689359/1‑150 (MQ=255) ttGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATTTATAAGCCTGATCTACAGGAATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAtt < 1:100907/150‑1 (MQ=255) ttGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAtt > 2:2344598/1‑150 (MQ=255) tGATATTATTAATATATTAGACATAACAATTCTATTTTCCTACCCTATGTATAAGCCTTATCTACAGGAATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGTGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt < 1:4414547/150‑1 (MQ=255) tGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt < 2:35211/150‑1 (MQ=255) tGAGATTATTAATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt > 2:4587345/1‑150 (MQ=255) tGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt > 1:2722573/1‑150 (MQ=255) tGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt < 2:4554939/150‑1 (MQ=255) tGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCAttt < 2:2104336/150‑1 (MQ=255) agaTTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTtct > 1:3883212/1‑150 (MQ=255) gaTTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCTTATTTAGCATGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCACGCGACACTGACAAGCAAAGCATTtctc < 1:2156266/150‑1 (MQ=255) ttattaATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAg > 1:1534021/1‑150 (MQ=255) ttattaATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAg > 2:2681931/1‑150 (MQ=255) ttattaATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAg < 1:3918451/150‑1 (MQ=255) tattaATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCACGCGACACTGACAAGCTACGCAGTTCTCAGc > 2:2735714/1‑150 (MQ=255) attaATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGcc > 1:3599454/1‑150 (MQ=255) ttaATATATTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCa > 1:1146590/1‑150 (MQ=255) ttaATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCa > 1:244309/1‑150 (MQ=255) atatatTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAAt > 1:2289872/1‑150 (MQ=255) atatatTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAAt > 2:4271396/1‑150 (MQ=255) tatatTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATc < 2:713551/150‑1 (MQ=255) tatatTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATc < 2:4712030/150‑1 (MQ=255) atTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAAt > 1:400912/1‑150 (MQ=255) atTAGACAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAAt > 1:28905/1‑150 (MQ=255) ttAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAAtt < 2:2398149/150‑1 (MQ=255) aGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATtta < 2:608361/150‑1 (MQ=255) aGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGAATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATtta < 1:3130697/150‑1 (MQ=255) aCAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATttatt > 1:1945100/1‑150 (MQ=255) cAGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATttatta > 1:1388888/1‑150 (MQ=255) cAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATttatta > 2:3824718/1‑150 (MQ=255) aGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTaa > 1:3090930/1‑150 (MQ=255) aGAATAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTaa > 2:527442/1‑150 (MQ=255) aaCAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAAc > 2:4250809/1‑150 (MQ=255) cAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAAcgc > 1:2490080/1‑150 (MQ=255) | GACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTGAGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTTAGCAAGGATTTCAAGTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAACGC > CP009273/1663744‑1664042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |