| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 149,044 | A→T | 23.3% | C86S (TGC→AGC) | yadM ← | putative fimbrial‑like adhesin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 149,044 | 0 | A | T | 23.3% | 506.6 / 166.6 | 223 | C86S (TGC→AGC) | yadM | putative fimbrial‑like adhesin protein |
| Reads supporting (aligned to +/- strand): ref base A (94/77); new base T (22/30); total (116/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 227 total aligned reads displayed.
GGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTAAGTGTGATGTTACAGGTTGTCG > CP009273/148895‑149193 | ggCATCATCAGTAGTCCGTTTTTTGAAACCCATTCCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCa < 2:3475577/150‑1 (MQ=255) catcatCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTcc > 2:4235123/1‑150 (MQ=255) atcatcAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCAccc > 2:2984680/1‑150 (MQ=255) catcaGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCAc > 1:3855193/1‑150 (MQ=255) caGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTgg > 1:3869545/1‑150 (MQ=255) agtagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGc > 1:4408599/1‑150 (MQ=255) agtagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGc < 2:3031567/150‑1 (MQ=255) gtagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCa < 1:601323/150‑1 (MQ=255) gtagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCa < 1:3263564/150‑1 (MQ=255) gtagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCa < 1:803336/150‑1 (MQ=255) tagtCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCaa < 2:1946365/150‑1 (MQ=255) tCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCa < 1:1374761/150‑1 (MQ=255) gTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGtt > 1:739144/1‑150 (MQ=255) ttttttGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGttt < 1:4386274/150‑1 (MQ=255) aaaCCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCa > 2:4474777/1‑150 (MQ=255) aaCCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAg > 2:1057193/1‑150 (MQ=255) aCCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGc > 2:1531427/1‑150 (MQ=255) cccATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGcc < 1:2463641/150‑1 (MQ=255) aTACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTga < 1:3170994/150‑1 (MQ=255) tACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTgag < 2:1680933/150‑1 (MQ=255) tACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTgag < 1:522217/150‑1 (MQ=255) aCCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTgaga > 1:1514471/1‑150 (MQ=255) ccGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGAt < 1:4107491/150‑1 (MQ=255) atatTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCt < 2:2015885/150‑1 (MQ=255) atTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGt > 1:2941402/1‑150 (MQ=255) ttACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTc < 2:3232019/150‑1 (MQ=255) tACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCg > 2:3142855/1‑150 (MQ=255) tACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCg > 2:712072/1‑150 (MQ=255) aCTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTctt > 1:4713555/1‑148 (MQ=255) aCTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGt > 2:3037602/1‑150 (MQ=255) cTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGtt > 2:2661761/1‑150 (MQ=255) cTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGtt < 1:3427389/150‑1 (MQ=255) cTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGtt < 1:1438474/150‑1 (MQ=255) ttGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGttt < 2:1528223/150‑1 (MQ=255) tGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGtttt > 1:843501/1‑150 (MQ=255) gtcgtcGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTa < 1:3792378/150‑1 (MQ=255) cgtcgAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTAtt < 2:2396814/150‑1 (MQ=255) cgtcgAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTAtt < 2:3711083/150‑1 (MQ=255) gtcgAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTc > 2:4049394/1‑150 (MQ=255) tcgAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTcg < 2:2458863/150‑1 (MQ=255) cgAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTagc > 2:4169668/1‑150 (MQ=255) aTGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCt > 1:667802/1‑150 (MQ=255) tGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCtt < 2:4579051/150‑1 (MQ=255) tGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCtt > 1:213777/1‑150 (MQ=255) tGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCtt < 2:3177647/150‑1 (MQ=255) aaTCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTAt < 1:2653803/150‑1 (MQ=255) aaTCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTAt < 1:224858/150‑1 (MQ=255) tCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATcc < 2:2827573/150‑1 (MQ=255) cACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCa < 1:1952047/150‑1 (MQ=255) aCCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAg < 2:2140082/150‑1 (MQ=255) aCCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAg < 1:2652535/150‑1 (MQ=255) ccAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGa > 2:2237091/1‑150 (MQ=255) aCTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCa > 2:28010/1‑150 (MQ=255) aCTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCa > 2:1207698/1‑150 (MQ=255) tGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATc < 1:4509824/150‑1 (MQ=255) gCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATcg > 2:1422663/1‑149 (MQ=255) gCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCt > 2:3881831/1‑150 (MQ=255) gCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCt > 2:4160115/1‑150 (MQ=255) gCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCt < 2:3634994/150‑1 (MQ=255) ggTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTAGCGATCTTATCCAGACCCAACTTa > 1:2928795/1‑150 (MQ=255) tataATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAgg > 2:3563484/1‑150 (MQ=255) tataATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAgg < 2:1695513/150‑1 (MQ=255) ataataAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAggg > 1:3244541/1‑150 (MQ=255) ataataAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAggg > 2:3168074/1‑150 (MQ=255) aataaGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGAt > 1:311481/1‑150 (MQ=255) taaGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATtc > 2:1745548/1‑150 (MQ=255) aaGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATtct > 2:3355920/1‑150 (MQ=255) aaGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATtct > 1:882149/1‑150 (MQ=255) aGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATtctc > 2:1329882/1‑150 (MQ=255) gCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCa < 1:3407324/150‑1 (MQ=255) gCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCa < 1:329963/150‑1 (MQ=255) gCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCa < 1:1706799/150‑1 (MQ=255) ttAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAAt > 1:4347439/1‑150 (MQ=255) ttAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAAt > 1:4018687/1‑150 (MQ=255) aGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGt > 2:2966727/1‑150 (MQ=255) gCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGtt < 1:4474777/150‑1 (MQ=255) gCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGtt < 1:1383454/150‑1 (MQ=255) ttGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGttat < 1:751161/150‑1 (MQ=255) ttGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGttat < 1:2353532/150‑1 (MQ=255) gatgatGCATTTCCGGTCAGAGTGGTATCAATCTAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGttatta < 1:4754216/150‑1 (MQ=255) gatgatGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGttatta < 2:1175021/150‑1 (MQ=255) atgatgCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTtattat < 1:3664215/150‑1 (MQ=255) tgatgCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTattatt < 1:2968972/150‑1 (MQ=255) tgatgCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTattatt < 1:4204482/150‑1 (MQ=255) atgCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGc > 1:1298489/1‑150 (MQ=255) gCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTTCca > 1:3365319/1‑150 (MQ=255) gCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCca > 2:4514580/1‑150 (MQ=255) aTTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCcatc < 2:843501/150‑1 (MQ=255) tttCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCcatca > 1:2577690/1‑150 (MQ=255) cGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCg < 2:2569485/150‑1 (MQ=255) ggTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGt < 1:2799482/150‑1 (MQ=255) cAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTTGTTATTATTGCCATCATTCGTGAc > 1:4277776/1‑150 (MQ=255) cAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGAc < 2:3869545/150‑1 (MQ=255) gagTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGt > 2:4835805/1‑150 (MQ=255) tGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGttat > 2:1585534/1‑150 (MQ=255) aaTCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGt > 2:798099/1‑150 (MQ=255) aTCCAACTGATGCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTa > 1:1582560/1‑150 (MQ=255) tCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTaa < 1:3737413/150‑1 (MQ=255) tGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTAAGTGTGa > 2:3270972/1‑150 (MQ=255) gCCACTGCTGCTCCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTAAGTGTGATGtt < 1:4235111/150‑1 (MQ=255) | GGCATCATCAGTAGTCCGTTTTTTGAAACCCATACCGATATTACTTGTCGTCGAAGATGAATCACCAGACTGCGGTATAATAAGCTTAGGTGAGCTTGATGATGCATTTCCGGTCAGAGTGGTATCAATCCAACTGATGCCACTGCTGCACCCACTGGCAACCAGTTTAAAATCAGCCTGAGATTCTGTCGTTTTATTCGCGATCTTATCCAGACCCATCTTAGGGATTCTCAATGTGTAGTTATTATTGCCATCATTCGTGACGTTATTACCAGTAAGTGTGATGTTACAGGTTGTCG > CP009273/148895‑149193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |