| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,092,916 | T→A | 19.3% | H60L (CAC→CTC) | ugd ← | UDP‑glucose 6‑dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,092,916 | 0 | T | A | 19.3% | 481.9 / 112.1 | 187 | H60L (CAC→CTC) | ugd | UDP‑glucose 6‑dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (76/75); new base A (11/25); total (87/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.07e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AAGGATTTATCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACA > CP009273/2092767‑2093065 | aaGGATTTATCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAgt > 2:515495/1‑150 (MQ=255) tttATCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTAtt > 2:2514811/1‑150 (MQ=255) ttATCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTAttt > 1:3174186/1‑150 (MQ=255) aTCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTa < 1:2991799/150‑1 (MQ=255) tctcAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTAt < 2:1078234/150‑1 (MQ=255) ctcAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATc > 2:2368070/1‑150 (MQ=255) tcAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCt < 1:4189097/150‑1 (MQ=255) aCTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGAt < 1:4107022/150‑1 (MQ=255) aCTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGAt < 1:4107419/150‑1 (MQ=255) cTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGAtt < 2:3176114/150‑1 (MQ=255) gTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaa < 2:1495610/150‑1 (MQ=255) gTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaa < 2:791541/150‑1 (MQ=255) tCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaaa > 1:607668/1‑150 (MQ=255) tCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaaa < 1:408391/150‑1 (MQ=255) tCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaaa < 1:2729496/150‑1 (MQ=255) tttAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCaaaaa > 2:3935023/1‑150 (MQ=255) ttAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAAc > 1:4592457/1‑150 (MQ=255) aTTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAActgc < 2:253548/150‑1 (MQ=255) ttACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAActgct < 2:2284581/150‑1 (MQ=255) ttACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAActgct > 1:776799/1‑150 (MQ=255) ttACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAActgct > 1:3113338/1‑150 (MQ=255) tACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAActgctg < 1:2844755/150‑1 (MQ=255) cTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGaa < 1:13168/150‑1 (MQ=255) tGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAAt > 2:929678/1‑150 (MQ=255) gATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTACTGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAAtt > 2:2338138/1‑150 (MQ=255) nttCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAAttt > 2:2619908/2‑150 (MQ=255) aTTCTACACTTGATGTATTGAAATAATTAGTTTTATTATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGTCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAAttt < 1:2464508/150‑1 (MQ=255) acacTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAAAGTGGCATTAAAGAGTATTTTATATGATTGCAAAAACTGCTGAATTTACTTa > 1:1720495/1‑150 (MQ=255) gATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATcaaca < 1:2414688/150‑1 (MQ=255) aTGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATcaacaa < 1:3429337/150‑1 (MQ=255) tATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAg > 1:3478450/1‑150 (MQ=255) gAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATATgaga > 2:4483113/1‑150 (MQ=255) gAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATATgaga > 2:2030441/1‑150 (MQ=255) gAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGgaga > 1:1460815/1‑150 (MQ=255) ataatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGatat > 2:251756/1‑150 (MQ=255) taatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTTTATTTTATCTGATTGCAAAAACAGCTGAAATTACTTATCAACAATAGGAGATATc > 1:3708846/1‑150 (MQ=255) taatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATc > 1:1669384/1‑150 (MQ=255) taatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATc < 2:1997748/150‑1 (MQ=255) taatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATc < 1:813227/150‑1 (MQ=255) aatTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATcc > 2:348654/1‑150 (MQ=255) ttAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGa < 1:4673218/150‑1 (MQ=255) gTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAAACAGCAACCCGGTACGCTACATATTTAACTAATGTGGCAATAAAGTGAAAAATATCTGATTGCAAAAACAGCAGAATTTCCATATCAACAATAGCAGATATCCCATCa > 2:2184350/1‑150 (MQ=255) ttAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTc < 2:2781163/150‑1 (MQ=255) aGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAg > 2:2301791/1‑150 (MQ=255) aGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAg < 1:1538758/150‑1 (MQ=255) aGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAg < 2:1032887/150‑1 (MQ=255) ggATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTTCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATACGATCATTCAGc > 1:1773808/1‑150 (MQ=255) aTCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTcatcat > 2:4552357/1‑150 (MQ=255) aTCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCAt < 2:2652034/150‑1 (MQ=255) cATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATTTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATAAACAATAGGAGATATACGATCATTCAGCATAg > 1:4477369/1‑150 (MQ=255) cATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAg < 1:2232988/150‑1 (MQ=255) cATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTACTTATCAACAATAGGAGATATACGATAATTCAGCATAg > 1:4478378/1‑150 (MQ=255) aTAGTCGGTTGGAGTGGCGATGATGACAAAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACAGCTGAATTTCCATATCAACAATAGGAGATATCCGATCATTCAGCaaatc > 2:809717/1‑146 (MQ=255) tAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCa > 1:1967099/1‑150 (MQ=255) gTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAAc < 1:4000271/150‑1 (MQ=255) gTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAAc < 1:859328/150‑1 (MQ=255) cGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAAcgc < 1:393923/150‑1 (MQ=255) ggTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAAcgcg > 2:364134/1‑150 (MQ=255) ggTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAAcgcg > 1:3159438/1‑150 (MQ=255) ttGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTg < 1:751833/150‑1 (MQ=255) tGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGa > 1:618794/1‑150 (MQ=255) gTGGCGATGATGACATACTCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTTCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGt < 1:2338138/150‑1 (MQ=255) gTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGt < 1:185007/150‑1 (MQ=255) gTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGt < 1:185359/150‑1 (MQ=255) ggCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTaa < 1:1350548/150‑1 (MQ=255) tgatgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAatat < 2:1779174/150‑1 (MQ=255) gatgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATc < 1:1806639/150‑1 (MQ=255) gatgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATc < 2:2420912/150‑1 (MQ=255) atgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCt > 1:1046241/1‑150 (MQ=255) atgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCt > 2:3471854/1‑150 (MQ=255) atgaCATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCt > 1:1046096/1‑150 (MQ=255) cATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATg > 2:3055332/1‑150 (MQ=255) tAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGcc > 2:1441050/1‑150 (MQ=255) aaTCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCca > 2:3275808/1‑150 (MQ=255) aGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAAc > 2:4762240/1‑150 (MQ=255) aTCCCGGTAGGCTTCATTTTTATCGAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTc < 2:4009747/150‑1 (MQ=255) gCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTtgt < 2:2196890/150‑1 (MQ=255) gCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTtgt < 1:1494846/150‑1 (MQ=255) gCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTtgt < 2:4647425/150‑1 (MQ=255) gCTTCATTTTTATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTtgt < 1:4253126/150‑1 (MQ=255) tCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCg < 2:4592457/150‑1 (MQ=255) aTTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGAt < 2:4791302/150‑1 (MQ=255) aTTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGAt < 2:3735195/150‑1 (MQ=255) tttttATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACATCATGATTTTGTGCGAtt > 1:1578217/1‑150 (MQ=255) ttttATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTa < 2:3849199/150‑1 (MQ=255) tATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGaa < 1:2603828/150‑1 (MQ=255) tATCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGaa > 2:412067/1‑150 (MQ=255) aTCTAATGTGGCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAg < 1:2932258/150‑1 (MQ=255) tAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACACCCTCATGATTTTGTGCGATTAGAAGccc > 1:3928687/1‑150 (MQ=255) tAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGccc > 2:3144465/1‑150 (MQ=255) aaTGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCg > 2:4213677/1‑150 (MQ=255) aTGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGt < 1:2514811/150‑1 (MQ=255) ggCATTAAAGAGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGa > 2:2906677/1‑150 (MQ=255) gCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGAc < 2:1235519/150‑1 (MQ=255) gCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGAc < 2:1168334/150‑1 (MQ=255) ttAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAg > 2:101800/1‑150 (MQ=255) tAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGc > 1:4303786/1‑150 (MQ=255) aaGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCt < 2:607865/150‑1 (MQ=255) tgtATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACa > 2:140610/1‑150 (MQ=255) tgtATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACa > 2:139636/1‑150 (MQ=255) | AAGGATTTATCTCAACTACGTCTTTAATTACTGATTCTACACTGGATGTATTGAAATAATTAGTTTTAGGATCATAGTCGGTTGGAGTGGCGATGATGACATAATCAGCATCCCGGTAGGCTTCATTTTTATCTAATGTGGCATTAAAGTGTATTTTATCTGATTGCAAAAACTGCTGAATTTCCTTATCAACAATAGGAGATATCCGATCATTCAGCATAGCAACGCGTGACGGTAAAATATCTAATGCCACAACCTCATGATTTTGTGCGATTAGAAGCCCGTTTGACAAGCCTACA > CP009273/2092767‑2093065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |