| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,105,545 | C→A | 28.5% | W333L (TGG→TTG) | rfbB ← | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,105,545 | 0 | C | A | 28.5% | 367.0 / 151.1 | 182 | W333L (TGG→TTG) | rfbB | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (64/66); new base A (25/27); total (89/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
CCAGAGCACGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTTCTCT > CP009273/2105397‑2105694 | gagCACGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTc > 1:3041927/1‑150 (MQ=255) cACGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCAc > 2:4628556/1‑150 (MQ=255) aCGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCAcc < 1:4500817/150‑1 (MQ=255) aCGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCAcc > 2:506909/1‑150 (MQ=255) aCGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCAcc < 1:4061009/150‑1 (MQ=255) aGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTAc > 2:3968732/1‑150 (MQ=255) aGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTAc > 1:3125458/1‑150 (MQ=255) ccAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATc > 1:183729/1‑150 (MQ=255) cctGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCtctc < 2:3989666/150‑1 (MQ=255) ctGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCa < 1:1355591/150‑1 (MQ=255) ctGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCa > 1:135965/1‑150 (MQ=255) cccTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAAc < 1:2039488/150‑1 (MQ=255) ccTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACg < 1:3018496/150‑1 (MQ=255) ccTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACg < 1:561488/150‑1 (MQ=255) cTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGt > 2:3473828/1‑150 (MQ=255) gTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGttt > 1:2139157/1‑150 (MQ=255) ttttGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTc < 2:4098851/150‑1 (MQ=255) ttGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCt > 2:3731232/1‑150 (MQ=255) gCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCtgt < 1:1092104/150‑1 (MQ=255) aaaaaGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGt > 1:4631706/1‑150 (MQ=255) aaaaGGAGGATATTCAGTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCACCCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGtt < 2:2929605/150‑1 (MQ=255) aaaGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGttt > 2:4738651/1‑150 (MQ=255) aaaGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAAACCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGttt > 2:4453752/1‑150 (MQ=255) aaGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTc < 2:4361990/150‑1 (MQ=255) aaGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTc < 2:2684490/150‑1 (MQ=255) aaGGAGGATATTCATTACTGGCGGCCCCCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTc > 2:782842/1‑150 (MQ=255) aggaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATc < 1:3244317/150‑1 (MQ=255) ggaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATcc > 1:1627282/1‑150 (MQ=255) ggaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATcc > 1:3674428/1‑150 (MQ=255) ggaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATcc > 1:2449899/1‑150 (MQ=255) gaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATccc > 1:2672006/1‑150 (MQ=255) gaTATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATccc > 1:2671753/1‑150 (MQ=255) tatTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCaa > 1:1587857/1‑150 (MQ=255) tatTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCaa > 1:1587690/1‑150 (MQ=255) atTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAAt > 1:1849107/1‑150 (MQ=255) atTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAAt < 2:1381495/150‑1 (MQ=255) ttCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTATGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATg < 1:4071616/150‑1 (MQ=255) tCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATgc > 1:255913/1‑150 (MQ=255) tCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATgc < 2:1017857/150‑1 (MQ=255) tCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATgc > 2:4663547/1‑150 (MQ=255) tACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGa > 2:3138014/1‑150 (MQ=255) gcggcCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAAt < 2:765553/150‑1 (MQ=255) ccTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAAtcttct > 1:1892602/1‑150 (MQ=255) ccTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAAtcttct > 1:2236519/1‑150 (MQ=255) cATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAg < 1:4320656/150‑1 (MQ=255) cATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAg > 2:2443966/1‑150 (MQ=255) cATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAg > 1:1713060/1‑150 (MQ=255) tAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCa > 2:660199/1‑150 (MQ=255) aaGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCACTGCGCGACCAAACTTCTCAGCa > 2:1188597/2‑150 (MQ=255) ttCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCa < 2:4384330/150‑1 (MQ=255) ttCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagc < 1:388953/150‑1 (MQ=255) cAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagcat < 1:3625490/150‑1 (MQ=255) aaTCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagcata < 1:2318361/150‑1 (MQ=255) aaTCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGGACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagcata < 2:3573773/150‑1 (MQ=255) tCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagcatagc < 1:3714628/150‑1 (MQ=255) tCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAatagcatagc < 1:3714584/150‑1 (MQ=255) cGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAgcggcg > 2:3816817/1‑150 (MQ=255) tGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCg < 1:1018025/150‑1 (MQ=255) tGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCg < 1:1018044/150‑1 (MQ=255) gATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCCTCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCgt > 2:4599110/1‑150 (MQ=255) tAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCgtgt > 1:4043206/1‑150 (MQ=255) ggCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTcc > 2:932944/1‑150 (MQ=255) gCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTccc < 1:3805014/150‑1 (MQ=255) gCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTccc > 1:3129321/1‑150 (MQ=255) caccacTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCg > 2:234056/1‑150 (MQ=255) ccacTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGa < 2:2626915/150‑1 (MQ=255) ccacTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGa < 2:2626936/150‑1 (MQ=255) cacTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGAc > 1:2822681/1‑150 (MQ=255) cacTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGAc > 2:1744565/1‑150 (MQ=255) ttttCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGATTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCATCATCAATAGAATAGAGGCGATCGTGTCCCGGAAGAt > 2:4629610/1‑150 (MQ=255) tttCACATTATCAACCCATTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATc > 1:3271058/1‑150 (MQ=255) tCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAg > 1:4824751/1‑150 (MQ=255) acaTTATCAACACATTTTGTATTGGACATGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCa < 2:3076190/150‑1 (MQ=255) aTCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATa > 2:3309202/1‑150 (MQ=255) tCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATaa > 2:1788374/1‑150 (MQ=255) cATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGAtt < 2:1061981/150‑1 (MQ=255) aTTTTGTATTGGACAGTTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATAGTGTCCCGGACGATCAGCAACATAAGTGAttt < 2:707659/150‑1 (MQ=255) aTTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGAttt < 1:3757085/150‑1 (MQ=255) aTTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGAttt < 2:3215948/150‑1 (MQ=255) aTTTTGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGAttt < 2:3797146/150‑1 (MQ=255) ttttGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTg < 2:3305957/150‑1 (MQ=255) ttttGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTg > 1:3095989/1‑150 (MQ=255) ttttGTATTGGACAGGTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTg < 2:309015/150‑1 (MQ=255) ttGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCt < 1:3922732/150‑1 (MQ=255) gTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCa > 2:2242355/1‑150 (MQ=255) aTTGGACCGGTACCATTCCACCGTGTTACGAATCCCGCTCTCAAACGGTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTGCTCCGCATCAATAGCATAGCGGCGATCGGGTCCCGGACGATCAGCTCCATAAGTGATTTGCTCACg > 2:2906835/1‑150 (MQ=255) ggACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATa > 2:778900/1‑150 (MQ=255) gACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATaa < 2:3377791/150‑1 (MQ=255) aGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGAt < 1:507609/150‑1 (MQ=255) aGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGAt < 2:858102/150‑1 (MQ=255) aGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGAt < 1:782842/150‑1 (MQ=255) aGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGAt < 2:858131/150‑1 (MQ=255) ggTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGAtt < 1:4606747/150‑1 (MQ=255) ggTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATaa > 1:595976/1‑146 (MQ=255) ggTACAATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATaa < 2:595976/146‑1 (MQ=255) tACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTtc < 2:415200/150‑1 (MQ=255) aCCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTtct < 1:3138014/150‑1 (MQ=255) aCCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTtct < 1:1180686/150‑1 (MQ=255) cATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCCATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTTctct > 1:234262/1‑150 (MQ=255) cATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTTctct > 2:2979082/1‑150 (MQ=255) | CCAGAGCACGCTGTAGTTCCCAACCTACCTGCCCTGTTTTGCCAAAAAGGAGGATATTCATTACTGGCGGCCCTCATAGTTCTGTTCAATCCACGATTGATAGGCACCACTTTTCACATTATCAACCCATTTTGTATTGGACAGGTACCATTCCACCGTTTTACGAATCCCGCTCTCAAACGTTTCCTGTGGTTTCCATCCCAATGCGCGACCAATCTTCTCAGCATCAATAGCATAGCGGCGATCGTGTCCCGGACGATCAGCAACATAAGTGATTTGCTCACGATAAGATTTCTCT > CP009273/2105397‑2105694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |