| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 21.1% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 21.1% | 228.9 / 5.4 | 114 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (26/54); new base A (20/7); total (53/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170565‑2170860 | ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCa < 1:4177878/150‑1 (MQ=255) tGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTGTTGTATTTaaa > 1:1244818/1‑150 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTTATTTAaaaaa > 1:633875/1‑149 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAat < 1:4320030/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTCAAAat > 1:633777/1‑150 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAata < 1:724721/150‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAata < 2:755511/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAtat‑a < 2:3713627/150‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑aa < 1:3718689/150‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑aa < 1:3718690/150‑1 (MQ=255) gTTTCTACCACCACTTGCATCGGTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAt < 2:4414903/150‑1 (MQ=255) tCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑Gaa < 2:1970251/150‑1 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTGTTTAGATTTCAAAATAT‑aaataaa > 2:747324/1‑145 (MQ=255) cTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAAAAT‑AAT‑Gaaa > 2:3124616/1‑150 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGGTTTAAAAATAA‑AAT‑TAAattatt > 1:1090930/1‑150 (MQ=255) acacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTAttt < 1:491055/149‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AAT‑GAAAATAtttt > 2:1545274/1‑149 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTTTTTTTAAAAAAAA‑AAT‑TAAAATAttttt > 1:2123853/1‑148 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAAAAT‑AAT‑TAAATTAttttt > 1:3562270/1‑148 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGAACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAAA‑AAA‑TAAAATAttttt > 1:3562281/1‑148 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGtttt < 2:4463034/150‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAAA‑AAT‑TAAATTAAttttttttt > 2:292015/1‑149 (MQ=255) aTCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTaa > 2:2634303/1‑150 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAata < 2:2230287/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAatat < 1:2844384/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAatat < 1:620950/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAatat < 1:1887114/150‑1 (MQ=255) cGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCga < 2:3189806/150‑1 (MQ=255) agaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAAAAT‑AAT‑GAAATTATTTGTTTTTAAATATCgaga > 2:358376/1‑150 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATAT‑AAT‑TAAATTATTTGTTTTTTAatatatatat > 1:4046514/1‑144 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATa < 1:2403137/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATa < 1:2403108/150‑1 (MQ=255) aTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTGTTTGATTTTTAAAAATAAATATAAAATATTTTTTTTtatatagaaatt > 1:2433680/1‑144 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACg < 2:2785886/150‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:3959338/150‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAAT‑AAT‑GAAATTATTTTTTTTTAAATATAGAGATAACGAt > 2:1549737/1‑150 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAATAT‑AAA‑GTAATTATTTGTTTTTAAATATAGAGATAAAGAt > 2:2221263/1‑150 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGTTTTGAAAATAT‑AAT‑TGAATTATTTGTTTTTTTATATAGAGATAAAGAtaa > 2:931090/1‑148 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:3733324/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:1287918/150‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCGGTGCGGTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAATAT‑AAA‑GAAATTATTTGTTTTTAAATATCGCGATAACCATCACaa > 2:2355151/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTAAAAAAAT‑AAA‑GAAATTATTTGTTTTTTAATAAAGAGATAACGATCaaaaaa > 2:92484/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTTTTTTTAAATATAGAGATAACGATCACaaaa > 2:2521939/1‑150 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 2:4340816/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAAc < 1:4216316/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:1163110/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:1163127/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:1163828/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:912793/150‑1 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTTAAAAAAA‑AAT‑TTAAATTTTTTTTTTTTAATATATTGATAAAGATaaaaaaaaaca > 1:2289231/1‑147 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTGATTTAAAAATAT‑AAT‑TTAATTATTTGTTTTTTTATATAGATATAACAATaaaaaaaaaaa > 1:2289194/1‑147 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 1:3960572/150‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAAAAT‑AAT‑GAAATTATTTTTTTTTAAATATAGAGATAAAGATCACAAAAAAGAc > 2:747405/1‑150 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAA‑GAAATTATTTGTTTTTTAATATAGAGATAACGATAACAAaaaagaaaaaaagaaa > 2:3081464/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATAT‑AAT‑TTAATTATTTTTTTTTTTAAATCGAGATAACGATCAAAAAAAAGACAatattatca > 2:3052906/1‑145 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATAT‑AAT‑GAAATTATTTTTTTTTAAATATCGTGATAACGATCACAAAAACGACAATATGAAAat < 2:1569744/150‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATAT‑AAT‑TAAATTATTTTTTTTTAAATATAGAGATAACGATCAAAAAAAAGACAAAATGAAAattatta > 2:3621279/1‑149 (MQ=255) ccgcGCTGTGCGTTGTACAGCACCTGCTTTGTCGATCCCACGTACATTTTCAAAACCTGTCGTTTGTTTTCGATTACAAAAAAT‑AAT‑CAAATTATTTTTTTTTAAATATCTATAAAACGATCACAAAAACGACAATATGAAAATTATTCg < 2:1008196/150‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAATAT‑AAT‑GAAATTATTTGTTTTTTAATATCGAGATAACGATAACAAAAAAGACAAAATTAAAAATATTAgagg > 2:1819889/1‑150 (MQ=255) cTGTGGGTTGTTCAGCATCTGCTTTGTCGAACCCACTTACATTTACAAATCCTGTCGTTTTTTTTCTATTAAAAAATAT‑AAT‑CAATTTATTTTTTTTTAAATATCTAGATAACGACCACAAACACGACAATATGAAAATTATTCgaggag < 1:964353/150‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTCAAAATAT‑AAA‑GAAATTATTTGTTTTTAAATATAGAGATAACGATAACAAAAAACACAAAATTAAAATTATTAGAGgtgt > 2:1853524/1‑150 (MQ=255) ttgggttgtgCAGCATCTGCTTTTTCGATACAACGTACATTTTCATATCCTGTCGTTTTTTTTATTTTTCAAAATAT‑AAT‑TCAATTTTTTGTTTTTAAATATCTTGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTg < 2:3091331/146‑1 (MQ=255) gtgCGTTGTTCAGCATCTGCTTTGTCGATCCCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTACAAAATAT‑AAT‑CAAATTATTTTTTTTTAAATATCGCTATAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTg < 1:2326414/150‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCTATACCACTTACATTTACATATCCTGTCGTTTTTTTTCTATTACAAAATAT‑ATT‑TAATTTATTTTTTTTTAAATATCGAGATAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 1:1167120/150‑1 (MQ=255) ttgtaCAGCATCTGCTTTGTCTATACCACTAACATTTTCATATCCTGTGGTTTGTTTTCTATTACAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 1:1167065/150‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTGAAAAAAT‑AAT‑TTAATTATTTTTTTTTTAAAATAGTGATTAAGATAACAAAAAAGACAAAATGAAAAATATTAGAGGAGtttaatgg > 1:3107284/1‑143 (MQ=255) tCAGCATGTGCTTTGTCGATACCACGAAATTTTTAATATCCGGTCTTTTTTTTTCTATTTAAAAATAT‑AAT‑TAAATTTTTTTTTTTTAAATATCTATATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑aaa < 1:2205607/150‑1 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAA‑AAT‑GAAAATATTTGTTTTTAAATATAGATATAAAGATCAAAAAAAAGACAAAATTAAAAATATTAGAGGGGTGAAAGGC‑‑aaaa > 2:2139865/1‑150 (MQ=255) cATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTAAAAAAATAAAT‑AAAATAATTTTTTTTTAAA‑ATAGAGAAAAAGATAAAAAAAAAAACAAAAATAAAAAAATTATAGGAGTGTAATTG‑‑aaaaaaa > 1:2125116/1‑150 (MQ=255) tgtGCTTTGTCTATACCACGTAAATTTTCATATCCTGTCGTTTTTTTTCTATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACg < 2:2564844/148‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCGATTTAAAAATAT‑AAT‑GAAATTATTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACgg < 2:3149686/150‑1 (MQ=255) tgatttGTCTATACCACTTACATTTTCATATCATTTCTTTTGTTTTCTATTAAAAAATAT‑AAT‑TAAATTATTTGTTTTTAAATATCGATATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGc < 2:1083184/147‑1 (MQ=255) gTCGATACCACGTACTTTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCg < 2:1121703/150‑1 (MQ=255) gTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑TAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCg < 2:1121739/150‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATAA‑AAT‑GAAATTATTTTTTTTTAAATATAGAGATAACGATAAAAAAAAAGACAAAATGAAAATTATTAGAGGAGTGAAAGGC‑‑AAAAAAAAGGCCTCCCGa > 2:2717329/1‑150 (MQ=255) aCCACGTACATTTTCATATCCTGTCGTGTTTTTTCGTTTTAAAAATAT‑AAT‑GAAATTATTTTTTTTTAAATATAGAGTTAACGATAACAAAAAAGAAAATATGAAAATTATTAGAGGTGTGAAAGGC‑‑ACAAAAAAGGCCTCCCGCTAggg > 2:2784512/1‑150 (MQ=255) acttACTTTTTCATAGCCTGTCTTTTGTTTTCTATTTCAAAATAT‑AAT‑GAAATTATTTTTTTTTAAATATCGATATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAg < 1:700624/147‑1 (MQ=255) cGTACATTTTCATTTCATGTCGTTTTTTTTCGATTTAAAAATAT‑AAT‑GAAATTTTTTTTTTTTAAATATCTAGAAAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGc < 2:4154047/150‑1 (MQ=255) aCATTTTCATATCCTGTCGTGTGTTTTAGGTTTAAAAAAAT‑AAA‑TAAAATATTTTTTTTTTAATATAGATATAAAGAAAACAAAAAAAAAAAAATTAAAATTAATCGATGGGGGAAATTC‑‑AAAAAAAAAGCCACCCGAAAGGGTAgacct > 2:2912458/1‑146 (MQ=255) cATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATAA‑AAA‑GAAAATAATTGTTTTTTAATATCGAGATAAAGATAACAAAAAACAAAAAATGAAAAATATTAGAGGAGTGGAAGGC‑‑CAAAAAAACGCCACCCCCTAAGGCAGCCgaa > 2:4670986/1‑148 (MQ=255) tttttCATATCCTGTCTTTTTTTTTCTATTTCAAATTAT‑AAT‑GAAATTATTTTTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:166990/149‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:166792/150‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:4418954/150‑1 (MQ=255) tttgtttTCTATTTAAAAATAT‑AAT‑TAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:1545274/150‑1 (MQ=255) ttttttCTATTTCAAAATAT‑AAT‑TAATTTTTTTTTTTTTAAATATCGATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 1:292015/148‑1 (MQ=255) ttttttCTATTACAAAATAT‑AAT‑TAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 2:1497114/148‑1 (MQ=255) tgtttTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:3479505/1‑150 (MQ=255) ttttCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:3314608/1‑150 (MQ=255) ttttCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCA‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTAt > 2:3314736/1‑150 (MQ=255) ttttCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCA‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGGGTTTTTAt > 2:3314540/1‑150 (MQ=255) tCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg < 2:2816374/150‑1 (MQ=255) tCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:3638115/1‑150 (MQ=255) tCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:3637939/1‑150 (MQ=255) gATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:1838545/1‑150 (MQ=255) gATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:1838173/1‑150 (MQ=255) gATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCAGGa > 1:1840619/1‑150 (MQ=255) aTTTCAAAATAT‑AAT‑GAATTTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:2755094/150‑1 (MQ=255) ttacAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:328135/147‑1 (MQ=255) ttCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:4029072/1‑150 (MQ=255) ttCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:4029111/1‑150 (MQ=255) | TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATAT‑AAT‑GAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170565‑2170860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |