| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,757 | T→A | 7.5% | intergenic (‑74/+234) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,757 | 0 | T | A | 7.5% | 396.0 / 3.4 | 145 | intergenic (‑74/+234) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base T (82/50); new base A (2/10); total (84/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 152 total aligned reads displayed.
GAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170608‑2170906 | gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGAt < 2:3959314/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTTGTTTTGAAAATATAATTGAATTATTTGTTTTTTTATATAGAGATAAAGAtaa > 2:931090/1‑148 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 1:3733324/150‑1 (MQ=255) ttGAATGCCGGAACCGCATAACCGCCGCGCGGTGCGGTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTCAAAATATAAAGAAATTATTTGTTTTTAAATATCGCGATAACCATCACaa > 2:2355151/1‑150 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTGAAAATATAATGAAAATATTTTTTTTTAAATATCGAGATAAACATCACaaa > 2:3333638/1‑150 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTCAAAAAATAAATAAAATATTTTTTTTTTAATATAGATATAAAGATAaaaaaa > 1:804018/1‑150 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACaaaaa < 2:4340816/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:1163127/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 1:1163110/150‑1 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTTAAAAAAAAATTTAAATTTTTTTTTTTTAATATATTGATAAAGATaaaaaaaaaca > 1:2289231/1‑147 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAc < 1:3960572/150‑1 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATATAATTTAATTATTTTTTTTTTTAAATCGAGATAACGATCAAAAAAAAGACAatattatca > 2:3052906/1‑145 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGTGATAACGATCACAAAAACGACAATATGAAAat < 2:1569744/150‑1 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATAGAGATAACGATCAAAAAAAAGACAAAATGAAAattatta > 2:3621279/1‑149 (MQ=255) ccgcGCTGTGCGTTGTACAGCACCTGCTTTGTCGATCCCACGTACATTTTCAAAACCTGTCGTTTGTTTTCGATTACAAAAAATAATCAAATTATTTTTTTTTAAATATCTATAAAACGATCACAAAAACGACAATATGAAAATTATTCg < 2:1008196/150‑1 (MQ=255) cgcTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTAAAAATAAAAAGAAATTATTTTTTTTTTAATATAGAGATAAAGATCACAAAAAAGACAAAATGAAAAATATTAgagg > 2:1820085/1‑150 (MQ=255) cTGTGGGTTGTTCAGCATCTGCTTTGTCGAACCCACTTACATTTACAAATCCTGTCGTTTTTTTTCTATTAAAAAATATAATCAATTTATTTTTTTTTAAATATCTAGATAACGACCACAAACACGACAATATGAAAATTATTCgaggag < 1:964353/150‑1 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTCAAAATATAAAGAAATTATTTGTTTTTAAATATAGAGATAACGATAACAAAAAACACAAAATTAAAATTATTAGAGgtgt > 2:1853524/1‑150 (MQ=255) ttgggttgtgCAGCATCTGCTTTTTCGATACAACGTACATTTTCATATCCTGTCGTTTTTTTTATTTTTCAAAATATAATTCAATTTTTTGTTTTTAAATATCTTGATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTg < 2:3091331/146‑1 (MQ=255) ttgttCAGCATCTGCTTTGTCTATACCACTTACATTTACATATCCTGTCGTTTTTTTTCTATTACAAAATATATTTAATTTATTTTTTTTTAAATATCGAGATAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 1:1167120/150‑1 (MQ=255) ttgtaCAGCATCTGCTTTGTCTATACCACTAACATTTTCATATCCTGTGGTTTGTTTTCTATTACAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAgg < 1:1167065/150‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTTGTTTTGAAAAAATAATTTAATTATTTTTTTTTTAAAATAGTGATTAAGATAACAAAAAAGACAAAATGAAAAATATTAGAGGAGtttaatgg > 1:3107284/1‑143 (MQ=255) tCAGCATGTGCTTTGTCGATACCACGAAATTTTTAATATCCGGTCTTTTTTTTTCTATTTAAAAATATAATTAAATTTTTTTTTTTTAAATATCTATATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑aaa < 1:2205607/150‑1 (MQ=255) cAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATAAAATGAAAATATTTGTTTTTAAATATAGATATAAAGATCAAAAAAAAGACAAAATTAAAAATATTAGAGGGGTGAAAGGC‑‑aaaa > 2:2139865/1‑150 (MQ=255) tgtGCTTTGTCTATACCACGTAAATTTTCATATCCTGTCGTTTTTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACg < 2:2564844/148‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCTTTTGTTTTCTATTACAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACgg < 2:2509203/150‑1 (MQ=255) gTCGATACCACGTACTTTTTCATATCCTGTCTTTTGTTTTCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCg < 2:1121703/150‑1 (MQ=255) tCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATAAAATGAAATTATTTTTTTTTAAATATAGAGATAACGATAAAAAAAAAGACAAAATGAAAATTATTAGAGGAGTGAAAGGC‑‑AAAAAAAAGGCCTCCCGa > 2:2717329/1‑150 (MQ=255) aCCACGTACATTTTCATATCCTGTCGTGTTTTTTCGTTTTAAAAATATAATGAAATTATTTTTTTTTAAATATAGAGTTAACGATAACAAAAAAGAAAATATGAAAATTATTAGAGGTGTGAAAGGC‑‑ACAAAAAAGGCCTCCCGCTAggg > 2:2784512/1‑150 (MQ=255) acttACTTTTTCATAGCCTGTCTTTTGTTTTCTATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAg < 1:700624/147‑1 (MQ=255) cATTTTCATATCCTGTCGTGTGTTTTGGATTTAAAAATAAAAAGAAAATAATTGTTTTTTAATATCGAGATAAAGATAACAAAAAACAAAAAATGAAAAATATTAGAGGAGTGGAAGGC‑‑CAAAAAAACGCCACCCCCTAAGGCAGCCgaa > 2:4670986/1‑148 (MQ=255) tttttCATATCCTGTCTTTTTTTTTCTATTTCAAATTATAATGAAATTATTTTTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:166990/149‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:166792/150‑1 (MQ=255) aTTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAg < 2:4418954/150‑1 (MQ=255) tttgtttTCTATTTAAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:1545274/150‑1 (MQ=255) ttttttCTATTTCAAAATATAATTAATTTTTTTTTTTTTAAATATCGATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 1:292015/148‑1 (MQ=255) ttttttCTATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 2:1496452/148‑1 (MQ=255) ttttttCTATTACAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa < 2:1497114/148‑1 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:3314608/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCA‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGGGTTTTTAt > 2:3314540/1‑150 (MQ=255) tCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg < 2:2816374/150‑1 (MQ=255) tCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:3637939/1‑150 (MQ=255) tataaaaaaaTAAACTCAATTTTTTTTTTTTAAAATAGATATAAAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 1:863693/144‑1 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa > 1:1838173/1‑150 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCAGGa > 1:1840619/1‑150 (MQ=255) ataaaaaaaaaTAATCAAATTATTTTTTTTTAAATATCTATAAAACTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:978646/145‑1 (MQ=255) aTTTCAAAATATAATGAATTTATTTTTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGAt < 1:2755094/150‑1 (MQ=255) ttacAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATg < 2:328135/147‑1 (MQ=255) ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:4029072/1‑150 (MQ=255) ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 1:4029111/1‑150 (MQ=255) taaaaaTATAATGAATTTTTTTTTTTTTAATTATCTAGATCCAGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:2089598/148‑1 (MQ=255) aaaaaaTATAATGAATTTTTTTTTTTTTAAATATCTATATACCTAACAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:2089179/148‑1 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 2:3762421/1‑150 (MQ=255) atatAATGAAATTTTTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 2:1090930/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:3915236/1‑150 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:2236234/1‑150 (MQ=255) ataATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaaa < 1:395780/150‑1 (MQ=255) aattaaattaTTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa < 2:4096017/150‑1 (MQ=255) aaTGAATTTTTTTTTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACa < 1:4371643/150‑1 (MQ=255) tGAATTTATTTGTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa < 2:3079492/150‑1 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACACTATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:4699832/1‑150 (MQ=255) gAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:1041931/1‑150 (MQ=255) atttattTTTTTTTAAATATCGATATAACGATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 1:188110/148‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:2415495/1‑150 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg > 2:3499173/1‑150 (MQ=255) ttattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTgg > 2:3498006/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:4626151/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:4624050/1‑150 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTCGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 1:401441/1‑150 (MQ=255) attTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa > 2:2755884/1‑150 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt > 1:90152/1‑150 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt > 1:3440200/1‑150 (MQ=255) tGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg > 1:400326/1‑150 (MQ=255) gTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 2:3151188/1‑150 (MQ=255) gTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 1:4763974/1‑150 (MQ=255) gTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 1:4763763/1‑150 (MQ=255) tttttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 1:2282261/1‑150 (MQ=255) ttttAAATATCTACAAAACGATAACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa < 2:2433680/150‑1 (MQ=255) aaaTATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:2123853/150‑1 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCACAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTCTGTa > 2:3857020/1‑150 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:1244818/150‑1 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:1246922/150‑1 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:3358558/1‑150 (MQ=255) aaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg > 2:919188/1‑150 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:2068378/1‑150 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc > 1:2507809/1‑150 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc > 1:2507436/1‑150 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc > 2:2057887/1‑150 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg > 1:230599/1‑150 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAAAGGCCACCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGGTAACATACGTGGCAGGGCGATGTAGGCATg > 1:3157820/1‑150 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTCTGTAGGCATGAt > 2:2777152/1‑150 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt > 1:2465369/1‑150 (MQ=255) agaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt < 2:2820049/150‑1 (MQ=255) agaAAACGAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt < 2:2820065/150‑1 (MQ=255) gaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATa > 2:4056362/1‑150 (MQ=255) aTAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 2:84330/150‑1 (MQ=255) aTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 2:2516205/150‑1 (MQ=255) aCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc > 1:2339198/1‑150 (MQ=255) cGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACg > 1:4315073/1‑150 (MQ=255) gATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:3504286/1‑150 (MQ=255) | GAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGC‑‑AAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170608‑2170906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |