| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 169,937 | C→A | 26.0% | intergenic (+6/+152) | fhuB → / ← hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 169,937 | 0 | C | A | 26.0% | 586.8 / 33.6 | 252 | intergenic (+6/+152) | fhuB/hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Reads supporting (aligned to +/- strand): ref base C (26/138); new base A (61/2); total (112/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-31 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 258 total aligned reads displayed.
GCGCTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTG > CP009273/169788‑170086 | gcgcTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTc < 2:868458/150‑1 (MQ=255)gcgcTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTc < 2:46914/150‑1 (MQ=255)gcgcTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTc < 2:1773381/150‑1 (MQ=255) gcTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCa < 1:4631347/150‑1 (MQ=255) gcTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCa > 2:2287539/1‑150 (MQ=255) tggtggGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACaaa > 1:3787660/1‑148 (MQ=255) tggtggGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTGCata > 1:4677108/1‑150 (MQ=255) ggtgggtgGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCatat < 1:4876010/150‑1 (MQ=255) gtgggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACAaata > 1:2381155/1‑150 (MQ=255) tgggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATaa < 1:2528894/150‑1 (MQ=255) gtggtTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTTTTTTTAAATATaaaag > 1:3348718/1‑147 (MQ=255) agtggtgGTGTTGGCTGATTGGTGGGGGGGTTTGGTGTTGTTTCCTTTCCAGATCCGGGGGGGGCTGATGTCAACATTTATGGGCGCGCATTATTTTATCTATTTGTTTAGAAAGCAGAGCCTTTAATTTTTCCATATAA‑CGGCCCTGTa < 1:87566/145‑1 (MQ=255) ctgctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAA‑AAGCCCAGTaa > 1:3187471/1‑149 (MQ=255) tgctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTATTTTTAAAAATAA‑AAGCCCAGTAca > 1:2077705/1‑149 (MQ=255) gctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTTTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGc < 1:1933968/150‑1 (MQ=255) gctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGc < 2:715439/150‑1 (MQ=255) tgGTGTTCGCTGAGTGGTGTGGGGGGTTGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACATTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCTTTAATTTTTCCATATCA‑CGGCCCTGTACGCCt < 1:2939997/150‑1 (MQ=255) tgGTGTTCGCTGAGTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCt < 1:3861324/150‑1 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACATAAAA‑AGGCCCGGTACGcca > 1:1467884/1‑149 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCt < 1:2230465/150‑1 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTACATATAA‑AAGCCCGGTAAGcca > 2:656609/1‑149 (MQ=255) ggTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGTGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTAAATAAAA‑AGGACCTGTAAGCCTg > 2:4333631/1‑150 (MQ=255) ggTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTATTTTTTCTTATTA‑ACGCCCCGTTCGccag > 1:80626/1‑148 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTgg < 1:1514621/150‑1 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAA‑ACGCCCTGTAAGCCTgg > 2:2977637/1‑150 (MQ=255) tgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACATATAA‑AAGCCCAGTTAGCCTggt > 1:4319347/1‑149 (MQ=255) gtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACATATAA‑CCGCCCTGTACGCCTGGAc > 2:1910941/1‑150 (MQ=255) cGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTAAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGa < 1:214323/150‑1 (MQ=255) gCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGAt < 2:1831644/150‑1 (MQ=255) cTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATa < 2:965379/150‑1 (MQ=255) tGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATATTTTCATAAAA‑ACACCCCGTAAGCccggccggcaaa > 1:4092706/1‑146 (MQ=255) gtgGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTa < 2:792509/150‑1 (MQ=255) tgGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTTAATATAA‑AGGCCCAGTAAGCCAGGACCGATAAAGAGtttta > 1:3092913/1‑148 (MQ=255) tgGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTATGCCTGGACGGATAAAGCGTTTAc < 1:3593139/150‑1 (MQ=255) cGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTTAATATAA‑AGGCCCGGTACGCCAGGCCGGCTAAAGCGGTTAAGCGa > 1:3502500/1‑150 (MQ=255) gATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACa < 1:295295/150‑1 (MQ=255) gATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACa < 1:1188683/150‑1 (MQ=255) ggTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTCTCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCAGATCA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACg < 1:2177974/150‑1 (MQ=255) ggTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACg < 2:1178608/150‑1 (MQ=255) tGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTTCAGATAA‑AGGCCCAGTAAGCCAGGACGGCTAAAGCGTTTTAGCGACAACCGATGc > 1:4716661/1‑150 (MQ=255) tttCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTACATATAA‑AGGCCCGGTAAGCCGGGACGGATAAAGCGTTTAAGCGACAACGGATGccc > 2:3428234/1‑150 (MQ=255) tttCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGccc < 2:3389868/150‑1 (MQ=255) cattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTGCAGATAA‑ACGCCCGGGACCCCGGGGCGGGGAAACCCGTTACGCCCCAACCGAGGcccccag > 2:4166012/1‑146 (MQ=255) cattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAAAAA‑AAGCCCATGACGCCAGGACGGATAAATAGGTTTAGCGACAACCGCTGCCCCATg > 1:1095354/1‑150 (MQ=255) tccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTGCATAAAA‑ACGCCCCGGAAGCCCGGACGGGGAAAAAGGTTACGCGCCCACCGCTGcccccggcga > 1:1395337/1‑143 (MQ=255) accaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTGGAGAACGCAGCGCCTTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGa < 1:1612277/149‑1 (MQ=255) ccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTGCATAAAA‑ACGCCCTGTAAGCCAGGGAGGATAAAACGGTTAAGCGACAACCGATGCCCCCTGCGAc > 1:1522587/1‑150 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTTCATAAAA‑AAGCCCGGTAAGCCTGGACGGATAAAGCGTTTAAGCGACAACCGAATCCCCCTGCGaag > 1:1451512/1‑148 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACg < 2:3286919/150‑1 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACg < 1:75474/150‑1 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGAATTTTTTAAAAAAA‑CTGGCCAGTAAGCCTGGTCGGTGAAATCGTTTAATCGACAAACGATGCCCCAAGCGACg > 1:978443/1‑150 (MQ=255) gATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTTCATATAA‑AGGCCCTGTAAGCCAGGGCGGGTAAATCGTTTTAGCGACAACGGGTGCCCGATGCGAccca > 1:2730159/1‑147 (MQ=255) cccGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGgc < 1:4577332/150‑1 (MQ=255) cccGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑AGGCCCAGTACGCCTGGACGGCTAAAGCGTTTACGCGACAACGGATGCCCGCTGCGACGCTGgc > 2:2796476/1‑150 (MQ=255) ggcggGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTATTTTTCCCAAAAA‑AGGCCCGGTACGCCAGGCCGGATAAAGCGGTTACGCGACCACCGATGCCCCAGGCGACGCTGGcgcg > 2:2130348/1‑150 (MQ=255) ggggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAATAA‑CGGCCCTGTACGCCTGGACGGATAAATCGGTTAAGCGACAACCGATGCCCGATGCGACGCTGGCGCGTCt > 2:3077377/1‑150 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTTCATAAAA‑AGGCCCAGTACGCCAGGACGGATAAATCGGTTTAGCGACAAACGATTACCCAAGCGACGCTGGCGCGTCTTa > 2:164694/1‑150 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTa < 2:4471341/150‑1 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTa < 1:2778370/150‑1 (MQ=255) ctgctgTCACCCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATc < 2:3513163/150‑1 (MQ=255) tgctgTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCg < 1:656566/150‑1 (MQ=255) gctgTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCgg < 2:2603487/150‑1 (MQ=255) gTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGGTTACGCGCCAACGGATGCCCCATGCGACGCTGGCGCGTCGTATAGGGcc > 2:4784196/1‑150 (MQ=255) tCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCt < 1:2394607/150‑1 (MQ=255) tCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAAAAA‑AAGCCCAGTACACCAGGTCCGATAAAACCTTTAAGCGACAAACGATGACCCAAGCGACGCAGGCGCGGCATAAAGGGccg > 1:341549/1‑149 (MQ=255) cTTTATCGGCGCTCAATATTTTATCTATTTTTTGAGAAAGCAGAGCCTTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACaaa < 1:1335108/150‑1 (MQ=255) cTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTCCATATAA‑AGGCCCAGTACGCCTGGACGGATAAAGCGTTTAAGCGACAACGGATTCCCGATGCGACGCTGGCGCGTCTTATAGGGCCAACaaa > 2:2393863/1‑150 (MQ=255) tATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATAAAA‑ACGCCCTGTAAGCCTGGACGGATAAATCGTTTACGCGACAAACGATTCCCGAAGCGACGCAGGCGCGTCTTATAGGGCCTACaaaacg > 2:291631/1‑147 (MQ=255) cgcCATATTTTATCTATTTGTTGATAAAGCTGCGCTGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTCCGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAAt < 1:1735430/150‑1 (MQ=39) cgcCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTTAATTTTACAAATAA‑ACGCCCAGTACGCCGGGACGGGTAAAAAGTTTTACAGCCAAACCATTCCCCAATCGAAGCTGGCGCGGCGTATAGGGCCAAAAAAAAGccccccaa > 1:4421218/1‑146 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACATAAAA‑CGGCCCGGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATTCCCGATGCGACGCTGGCGCGTCTTATCGGGCCGAAAAACCGCCCCCAAACGTAg > 2:3194210/1‑150 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTACAAATAA‑AGGCCCTCTAACCCTGGACGGATAAAGCGTTTACGCGACAAAGGATGCCCCAAGCGACCCGTGCGCGTCATATAGGGCCTACAAAAGGCCCCCAAACGTAg > 2:143499/1‑150 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAAATTTTCCAAATAA‑CGGCCCAGTACGCCTGGACGGATAAAGCGTTTACGCGACAAAGGATTCCCGATTCGACGCTGGCGCGTCTTATCGGGCCAACAAAAGGCCCCGaaaaggag > 2:1527092/1‑144 (MQ=255) aTCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGa < 2:4825834/150‑1 (MQ=255) tCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGAt < 2:2817757/150‑1 (MQ=255) cTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATa < 1:249550/150‑1 (MQ=255) tgttgAGAAAGCAGAGCCGTTAATTTTTACATATAA‑AGGCCCAGTACGCCTGGACGGATAAAGCGTTTACGCGACAAAGGATTCCCCATGCGACGCTGGCGCGTCTTATAGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCg > 2:4374506/1‑150 (MQ=255) gttgAGAAAGCAGAGCCGTTAAATTTTACAAAAAA‑AGGCCCAGTACGCCGGGACGGAAAAAGCGTTTAAGCCACAAACGAAGCCCGAATCGACGCTTGCGCGTCATATCGGGCCTAAAAACCGCCCCCCATAGGAGGTCGGATAAGTCGt > 2:3082612/1‑150 (MQ=255) ttgAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGtt < 2:275079/150‑1 (MQ=255) ttgAGAAAGCAGAGCCGTTAATTTTTACAAATAA‑AAGCCCAGGAAGCCGGGACGGGTAAAGAGTTTAAGCGACAAACGATTCCCGAAGCGACGCAGGCGCGTCTTATACGGCCAACAAACCGCCCCCAAACGTAGGGCGGATAAGGCGtt > 2:453271/1‑150 (MQ=255) gcgaACGCAGAGCCTTTAATTTTTCCATAAAC‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCa < 1:2455000/148‑1 (MQ=255) gagaAAGCAGAGCCGTTAATTTTTACATATAA‑ACGCCCGGTAAGCCGGGGCCGATAAAACGTTTAAGCGACAACGGATGGCCCCTGCGGCGCTGGCGCGGCGTATAGGGCCAACAAAAGGCCCCCCAACGGAGGTCGGGGAAGGCggtaa > 2:543305/1‑146 (MQ=255) agaAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAc < 2:851933/150‑1 (MQ=255) aaGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcgcc < 2:2165598/150‑1 (MQ=255) agagCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCAt < 2:3360116/150‑1 (MQ=255) cgCCGTTATTTTTTCCATATAA‑CGGCCCGGTACGCCTGGCCGTATAAAGGGTTTACGCGACAAGGGATGCCCGATGCGACGCTGGCGCGTCTTAGCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc < 1:3276156/149‑1 (MQ=38) cgCCGTTAATTTTTCCATAGAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc < 1:1712406/149‑1 (MQ=255) agCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGGTAAGGCGTTCACGCCGCATcc > 1:292624/1‑150 (MQ=255) agCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGGCTTATCGGGCCGACAAACGGCCCCGAATCGTAGGTCGGATAATGCGTTCACGCCGCATcc > 1:3275613/1‑150 (MQ=255) ccGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa > 1:1858777/1‑150 (MQ=255) ccGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa > 1:4310819/1‑150 (MQ=255) cGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAc > 2:4486423/1‑150 (MQ=255) cGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAc < 2:4848950/150‑1 (MQ=255) ttAATTTTTCCATAGAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa < 2:197340/150‑1 (MQ=255) tgaaTTGTTCCCTATCC‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa < 2:3977342/148‑1 (MQ=255) taTTTTTCCAAACACCCGGCCCTGTACGCCTGCACGGATAACGGGTTTACGCTACAACGGATGCCCGAGGCGACGCTGGCGCGTCTTATCGGGCCAACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa < 1:416485/149‑1 (MQ=37) aTTTTGACATATAA‑CGGCCCTGTACGCCTGGACGTATAATGCTTTTACGCGACAACGGTTGCCCGATGCGACGCTGGCGCGTCTTATCGGGCATACAAACGGCCCCGAATCGTAGGTCGGATAAGGCTTTCACGCCGCATCCGACAAAcc < 1:1037364/150‑1 (MQ=38) tttCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATg < 2:3961974/150‑1 (MQ=255) tttCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAAGCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATg > 2:3561989/1‑150 (MQ=255) ttCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGACTCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGc > 2:525795/1‑150 (MQ=255) | GCGCTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAATTTTTCCATATAA‑CGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTG > CP009273/169788‑170086 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |