| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,343,941 | C→A | 27.7% | D184Y (GAT→TAT) | glpQ ← | periplasmic glycerophosphodiester phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,343,941 | 0 | C | A | 27.7% | 402.6 / 153.4 | 188 | D184Y (GAT→TAT) | glpQ | periplasmic glycerophosphodiester phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base C (65/71); new base A (17/35); total (82/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 212 total aligned reads displayed.
ACCAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTGGGAAACGCC > CP009273/2343793‑2344090 | aCCAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATcc < 2:2411050/150‑1 (MQ=255)aCCAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATcc > 1:2859818/1‑150 (MQ=255) cAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATcctt < 2:3695520/150‑1 (MQ=255) cAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATactt < 2:4383293/150‑1 (MQ=255) cAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATactt > 2:4011563/1‑150 (MQ=255) aGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATccttc > 2:1471730/1‑150 (MQ=255) aGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATccttc < 1:3214469/150‑1 (MQ=255) gATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATacttcc < 2:1406868/150‑1 (MQ=255) aTTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATacttccc < 1:1059758/150‑1 (MQ=255) gAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATccttcccttc < 1:4819908/150‑1 (MQ=255) cATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCtgatg > 2:1130965/1‑150 (MQ=255) aTGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCtgatga < 2:1009837/150‑1 (MQ=255) tGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTgatgat < 1:2660667/150‑1 (MQ=255) tGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTgatgat < 1:2659708/150‑1 (MQ=255) cccATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATgg < 2:767317/150‑1 (MQ=255) cccATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATgg > 1:426110/1‑150 (MQ=255) ccATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGa > 2:1322018/1‑150 (MQ=255) cATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACAGGTGTAACCATATTTCTTCAGCACTACCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGaa > 1:1842553/1‑150 (MQ=255) gTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGgcg > 1:3651994/1‑150 (MQ=255) ttCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGgcgc > 1:3542819/1‑150 (MQ=255) tCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCt < 1:4690159/150‑1 (MQ=255) tCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCt < 2:684162/150‑1 (MQ=255) ccAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCtt < 1:4161875/150‑1 (MQ=255) aGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTg < 2:3701617/150‑1 (MQ=255) cTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCACTATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGAt > 1:1724715/1‑150 (MQ=255) aTTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTc > 2:3097297/1‑150 (MQ=255) aTTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTc < 2:386008/150‑1 (MQ=255) ttCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCt > 1:2955126/1‑150 (MQ=255) ttCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCt < 2:4072718/150‑1 (MQ=255) tCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTg > 2:264211/1‑150 (MQ=255) tAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGAt < 1:1996729/150‑1 (MQ=255) tAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGAt < 1:1997072/150‑1 (MQ=255) aaTACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATa < 1:880066/150‑1 (MQ=255) aaTACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATa < 1:3176702/150‑1 (MQ=255) aCGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAAt < 1:979831/150‑1 (MQ=255) aCGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAAt < 1:2161930/150‑1 (MQ=255) aCGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAAt < 1:219948/150‑1 (MQ=255) cGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTATACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACAACGGCGCTTTGATTTCTGGATAAATa > 1:1312734/1‑150 (MQ=255) cTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATAcc < 1:66716/150‑1 (MQ=255) ttCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCg < 2:1813063/150‑1 (MQ=255) ttCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCg > 1:3784778/1‑150 (MQ=255) tCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGa < 1:3945183/150‑1 (MQ=255) aGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGata > 1:4602101/1‑150 (MQ=255) aGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGata < 1:1492967/150‑1 (MQ=255) aGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGata < 1:4731640/150‑1 (MQ=255) cTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATAtt > 1:3556877/1‑150 (MQ=255) tcatcaGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCGGTGATTTATGGATAAATAACGATAttt > 1:4572038/1‑150 (MQ=255) catcaGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATAtttt < 2:4861865/150‑1 (MQ=255) catcaGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATAAAGATAtttt > 1:3291487/1‑150 (MQ=255) atcaGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATAttttt < 1:2310064/150‑1 (MQ=255) caGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTcc < 2:630097/150‑1 (MQ=255) aGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTccc < 1:3243968/150‑1 (MQ=255) gCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCg < 1:739745/150‑1 (MQ=255) cATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCgg < 2:3235974/150‑1 (MQ=255) tCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTa < 1:3196738/150‑1 (MQ=255) cAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTag < 2:2734759/150‑1 (MQ=255) aaaaCATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTaga < 1:680936/150‑1 (MQ=255) aaCATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGt < 1:365828/150‑1 (MQ=255) aaCATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGt < 1:2596251/150‑1 (MQ=255) aaCATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGt < 2:4457265/150‑1 (MQ=255) tGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGAttt < 2:4043365/150‑1 (MQ=255) gCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTa < 1:1054819/150‑1 (MQ=255) cAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTaa < 1:2773469/150‑1 (MQ=255) cAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTaa > 2:2971931/1‑150 (MQ=255) aaCTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACAGATATTTTTCCCGGTAGAGTGATTTAACCCCTg > 2:3476218/1‑150 (MQ=255) aCTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGa < 1:3080981/150‑1 (MQ=255) tttATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAAc < 1:3634470/150‑1 (MQ=255) tATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACaa > 2:384318/1‑150 (MQ=255) gTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTc < 2:2498507/150‑1 (MQ=255) gTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTc < 2:2934048/150‑1 (MQ=255) cTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGAAATTTTTCCCGGTAGAGTGATTTAAACCCTGAACAAATTCaa > 2:285348/1‑150 (MQ=255) tttACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAAt < 1:2330231/150‑1 (MQ=255) tttACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAAt < 2:4595833/150‑1 (MQ=255) tACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAAtct < 2:4423666/150‑1 (MQ=255) tACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGTTTTCTGGATAAATAACGATATTTTTACCGGTAGAGTGATTTAAACCCAGAAAAAATTAAAtat > 1:190635/1‑148 (MQ=255) aCCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCGTTGATTTCTGGGTAAATACCCATATTTTTACCGGTAGAGTGATTTAACCCCAGAACAAATTCAAactc > 1:4145631/1‑150 (MQ=255) ccGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATctct < 1:761682/150‑1 (MQ=255) ggTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCtcttc > 2:456562/1‑150 (MQ=255) gtgtAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGTTTTCTGGGTTAAAAACGATATTTTTGCCGGTAGAGGGATTTAAACCCGGTACCAATTCAAtagcgtat > 1:3362762/1‑143 (MQ=255) gtgtAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCtcttct < 1:4423302/150‑1 (MQ=255) gtAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCttcttc < 1:4331020/150‑1 (MQ=255) gtAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCttcttc < 1:4404873/150‑1 (MQ=255) atatTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTTATGATGGAAGCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTGTAGTGATTTAACCCCAGAACAAAGTCAATCTATTATTCAAAgtt > 2:3489339/1‑148 (MQ=255) tatTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGgtg > 1:1112504/1‑150 (MQ=255) cttcAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTAAAAGGTGTGCAc > 1:2581252/1‑150 (MQ=255) ttcAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCAcc > 2:2802766/1‑150 (MQ=255) tcAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCAccc > 2:2708929/1‑150 (MQ=255) cAGCACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTTATTTATTGATAAATAACGATATTTTTACCCGTATATTGATTTAAACCCATAACAAAATAAAACTATTATTAAAAGGTGTGGAcccc > 1:4510377/1‑149 (MQ=255) aGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAAAAACGATAATTTTCCCGGTAGAGTGATTTAACCCCAGAACAAAATCAAACACATCGTCAAAGGTGTGCACCCgg > 1:2522193/1‑150 (MQ=255) aGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCGTTGATTTGTGGGTAAATACCCATATTTTTAACGGTAGAGTGATTTTACCCCAGAACAAAATCAATCTCTTCATAAAAGGTGTTCAccccg > 1:2839685/1‑148 (MQ=255) cACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGaa < 2:3264645/150‑1 (MQ=255) cACTTCCAGCGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGaa > 1:1547489/1‑150 (MQ=255) cTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGTTTTCTGGATAAATACCGATATTTTTACCGGTAGAGTGTTTTAACCCCAGAACAAATTCAAACTCTTCTTCAAAGGTGTGCACCCGGAAGt > 1:3866915/1‑150 (MQ=255) ttCCAGCGTTTGTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTc < 2:3382124/150‑1 (MQ=255) cGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACtt < 2:4602101/150‑1 (MQ=255) cGTTTTTGCCGCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACtt < 2:426110/150‑1 (MQ=255) gCAATATACTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTggg > 2:192553/1‑150 (MQ=255) cAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTGGGa < 2:3556877/150‑1 (MQ=255) aaTATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTGGGaa < 2:2356661/150‑1 (MQ=255) atCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTGGGAAACg > 2:3465881/1‑150 (MQ=255) | ACCAGATTGAGCTCCATGCCCATTTTGGGTTCCAGCTCATTCTTAATACGCTTCAGCTCATCAGCATCAAAACATTGCAAATAAACTTTATCGTCTTTACCGGTGTAACCATATTTCTTCAGCACTTCCAGCGTTTTTGCCGCAATATCCTTCCCTTCCTGATGATGGAACCACGGCGCTTTGATTTCTGGATAAATACCGATATTTTTCCCGGTAGAGTGATTTAACCCCTGAACAAATTCAATCTCTTCTTCAAAGGTGTGCACCCGGAAGTCGGACTTACCCATTGGGAAACGCC > CP009273/2343793‑2344090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |