| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 169,942 | T→A | 9.7% | intergenic (+11/+147) | fhuB → / ← hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 169,942 | 0 | T | A | 9.7% | 629.5 / 7.0 | 251 | intergenic (+11/+147) | fhuB/hemL | fused iron‑hydroxamate transporter subunits of ABC superfamily: membrane components/glutamate‑1‑semialdehyde aminotransferase (aminomutase) |
| Reads supporting (aligned to +/- strand): ref base T (86/130); new base A (28/3); total (114/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.18e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 261 total aligned reads displayed.
GGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCA > CP009273/169793‑170091 | ggtgggtgGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑atat < 1:3825487/150‑1 (MQ=255)ggtgggtgGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑atat < 2:719478/150‑1 (MQ=255) tgggtggTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATaa < 1:2528894/150‑1 (MQ=255) gtggtTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑GTTTTTTTAA‑ATATaaaag > 1:3348718/1‑147 (MQ=255) ctgctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATATAAAAGCCCAGTaa > 1:3187471/1‑149 (MQ=255) tgctgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑AAATAACGGCCCTGTAcc > 1:3961974/1‑149 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCt < 1:2230465/150‑1 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATATAAAGGCCCAGTACGCCt > 2:656566/1‑150 (MQ=255) tgGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAA‑ATATAAAGGCCCTGTAAGcca > 2:656631/1‑149 (MQ=255) ggTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGTGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAAATTTTAA‑ATAAAAAGGACCTGTAAGCCTg > 2:4333631/1‑150 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTgg < 1:1514619/150‑1 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATATAAACGCCCTGTAAGCCTgg > 2:2977637/1‑150 (MQ=255) gtgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑GAATTTTTAC‑ATATAACGGCCCAGTACGCCTgg > 2:4793704/1‑150 (MQ=255) tgtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTTT‑ATATAAAGGCCCAGTACGGCAGGa > 1:4317616/1‑150 (MQ=255) gtTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTAC‑ATATAACCGCCCTGTACGCCTGGAc > 2:1910941/1‑150 (MQ=255) ttCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTCTATATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACg < 1:1368219/150‑1 (MQ=255) cGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCAATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGa < 1:214288/150‑1 (MQ=255) gCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGAt < 2:1831644/150‑1 (MQ=255) cTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATa < 2:965379/150‑1 (MQ=255) tGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑GTATTTTTTA‑ATATAAAAGACCAGTACACCGGCACGGAGaa > 1:1606371/1‑150 (MQ=255) gACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCTT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATaaa < 1:487416/150‑1 (MQ=255) tGGTGTGGGCGGATGGTGCTGTGTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCg < 2:1748367/150‑1 (MQ=255) tgGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTTA‑ATATAAAGGCCCAGTAAGCCAGGACCGATAAAGAGtttta > 1:3092913/1‑148 (MQ=255) gggCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTTA‑AAATAAAAGCCCAGGAAGCCCGGACCGCTAAAACGGTTAct > 1:3770948/1‑149 (MQ=255) ggATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑Ac < 1:4415053/150‑1 (MQ=255) gATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACa < 1:295295/150‑1 (MQ=255) gATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACa < 1:1188683/150‑1 (MQ=255) ggTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACg < 2:1178608/150‑1 (MQ=255) tttCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTAC‑ATATAAAGGCCCGGTAAGCCGGGACGGATAAAGCGTTTAAGCG‑ACAACGGATGccc > 2:3428234/1‑150 (MQ=255) tttCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGccc < 2:3389868/150‑1 (MQ=255) tccattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGa < 1:2316071/150‑1 (MQ=255) cattccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑AAAAAAAAGCCCATGACGCCAGGACGGATAAATAGGTTTAGCG‑ACAACCGCTGCCCCATg > 1:1095354/1‑150 (MQ=255) cattccaGAGCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATg < 1:85219/150‑1 (MQ=255) attccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑GAATTTTTTG‑ATATAAAGGCCCGGTAAGCCGGGGCGGATGATGCGGGTTCGGG‑GCAACGGGTGGCCGATGc > 2:834543/1‑150 (MQ=255) ccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGAc < 2:2603846/150‑1 (MQ=255) ccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAA‑ATATAAACGCCCCGTAACCCAGGACGGCTAAATCGTTTAAGCG‑ACAACGGATTCCCCATGCGAc > 1:1522585/1‑150 (MQ=255) ccaGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAA‑AAATAAAAGCCCAGTAAGCCGGGACGGAAAAATCCTTTAAGCG‑ACAAAGGATGCCCCAAGCGAc > 2:1037364/1‑150 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTTC‑ATAAAAAAGCCCGGTAAGCCTGGACGGATAAAGCGTTTAAGCG‑ACAACCGAATCCCCCTGCGaag > 1:1451512/1‑148 (MQ=255) caGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATCACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACg < 1:2934702/150‑1 (MQ=255) gATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTTC‑ATATAAAGGCCCTGTAAGCCAGGGCGGGTAAATCGTTTTAGCG‑ACAACGGGTGCCCGATGCGAccca > 1:2730159/1‑147 (MQ=255) gATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑GTATTTTTTA‑AAATAAAATCCCAGTAATCCGGGAAGGATAAAAAGGTTTCTCG‑ACAACAGAATCCCCAAGCGACGcg > 1:963432/1‑149 (MQ=255) tCCCGGCGGGGCTGCTGTCAACCTTTAGCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTgg < 1:3486059/150‑1 (MQ=255) tCCCGGCGGGGCTGCTGTCAACATTTATCGGCGCCCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCTT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTgg < 1:4466914/150‑1 (MQ=255) cccGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAAAGGCCCAGTACGCCTGGACGGCTAAAGCGTTTACGCG‑ACAACGGATGCCCGCTGCGACGCTGgc > 2:2796476/1‑150 (MQ=255) ggcggGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTCC‑CAAAAAAGGCCCGGTACGCCAGGCCGGATAAAGCGGTTACGCG‑ACCACCGATGCCCCAGGCGACGCTGGcgcg > 2:2130348/1‑150 (MQ=255) cggGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATAAAACCGCCCTGTACGCCGGGACGGATAAATCGTTTAAGCG‑CCCCCGGATGCCCCAGGCGACGCTGGCGCGTc > 2:2530674/1‑150 (MQ=255) ggggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑AAATAACGGCCCTGTACGCCTGGACGGATAAATCGGTTAAGCG‑ACAACCGATGCCCGATGCGACGCTGGCGCGTCt > 2:3077377/1‑150 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTTC‑ATAAAAAGGCCCAGTACGCCAGGACGGATAAATCGGTTTAGCG‑ACAAACGATTACCCAAGCGACGCTGGCGCGTCTTa > 2:164694/1‑150 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTa < 2:4471341/150‑1 (MQ=255) ggCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTa < 1:2778370/150‑1 (MQ=255) ctgctgTCACCCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATc < 2:3513163/150‑1 (MQ=255) tgctgTCAACCTTTATCGGCGCGCCATATTTTCTCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCg < 2:4723773/150‑1 (MQ=255) tgctgTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCg < 1:656566/150‑1 (MQ=255) tgctgTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCg < 1:656631/150‑1 (MQ=255) tCAACCTTTCTCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCt < 1:2394586/150‑1 (MQ=255) cAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTa < 1:774529/150‑1 (MQ=255) cTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATATAAAGGCCCTGTACGCCTGGACGGATAAAGCGTTTAAGCG‑ACAACCGATGCCCGATGCGACGCTGGCGCGTCTTATAGGGCCTACaaa > 2:4842164/1‑150 (MQ=255) tATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑AAAAAAAGGCCCAGTAAGCCGGGTCGGAAAAAGACTTTACGCG‑CCAAACGATTCCCGAATCGACCCAGTCGCGTCTTATACGGCCaaaaaaaag > 2:516285/1‑147 (MQ=255) tATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATAAAAACGCCCTGTAAGCCTGGACGGATAAATCGTTTACGCG‑ACAAACGATTCCCGAAGCGACGCAGGCGCGTCTTATAGGGCCTACaaaacg > 2:291631/1‑147 (MQ=255) aTCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTGTAATTTTAAA‑AAAAAAC‑GCCCAGTACGCCACGACGGGTAAACCCGTTAAGAG‑ACAACCCATGCCCCCATCGAAGCGGGCGCCTCCTATACGGCCcacacaaccc > 1:4700075/1‑144 (MQ=255) cgcgcCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TTATTTTTAG‑ATATAAAGGCCCTGTTAGCCTGGTCGGATAAAGCGTTTTAGCG‑ACAAAGGATTCCCGATGCGACGCTGGCGCGTCTTATAGGGCCAACAAACGGCCCCGa > 2:4003224/1‑150 (MQ=255) cgcAATATTTTATCTTTTTGTTGATAAAGCAGAGCCGT‑TAATTTTTCA‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTATTATCGGGCCTACAAACGGCCCCGAAt < 1:1735398/150‑1 (MQ=255) gcCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAA‑AAAAAAAAGCCCAGTAAGCCAGGACGGATAAAAACATTAAGCGAAAAACGAATCCCCAAT‑CCAAGCAGGCCCGTCTTAAAGGGCCTACAAAACGCCCCCaaaa > 1:350468/1‑148 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATAAAACGGCCCGGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATTCCCGATGCGACGCTGGCGCGTCTTATCGGGCCGAAAAACCGCCCCCAAACGTAg > 2:3194210/1‑150 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTAC‑AAATAAAGGCCCTCTAACCCTGGACGGATAAAGCGTTTACGCG‑ACAAAGGATGCCCCAAGCGACCCGTGCGCGTCATATAGGGCCTACAAAAGGCCCCCAAACGTAg > 2:143499/1‑150 (MQ=255) tatTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAAATTTTCC‑AAATAACGGCCCAGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAAAGGATTCCCGATTCGACGCTGGCGCGTCTTATCGGGCCAACAAAAGGCCCCGaaaaggag > 2:1527092/1‑144 (MQ=255) tCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGAt < 2:2817757/150‑1 (MQ=255) cTATTTGTTGAGAAAGCCGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATa < 1:249548/150‑1 (MQ=255) atATTTGTTGATAAAGCAGAGCCTT‑TATTTTTACA‑AAATACCGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATa < 1:412621/149‑1 (MQ=39) tATTGGTTGTGAATGCTGAGCCGT‑TATTTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATaa < 1:202441/150‑1 (MQ=39) aTTGGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAg < 1:2152863/150‑1 (MQ=255) tttGTTGAGAAAGCAGAGCCGT‑GAAATTTTAC‑ATATAAACGCCCAGTAAGCCGGGACGGATAAAGCCTTTACGCG‑ACAACCGATTCCCCATGCGCCGCAGGCGCGGCTTATCGGGCCAACAAAAGGCCCCCAAACGTAGGTCGGAGAAgg > 2:534436/1‑150 (MQ=255) ttttgACAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCGGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCg < 1:146476/148‑1 (MQ=255) tgttgAGAAAGCAGAGCCGT‑TAATTTTTAC‑ATATAAAGGCCCAGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAAAGGATTCCCCATGCGACGCTGGCGCGTCTTATAGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCg > 2:4374506/1‑150 (MQ=255) gttgAGAAAGCAGAGCCGT‑TAAATTTTAC‑AAAAAAAGGCCCAGTACGCCGGGACGGAAAAAGCGTTTAAGCC‑ACAAACGAAGCCCGAATCGACGCTTGCGCGTCATATCGGGCCTAAAAACCGCCCCCCATAGGAGGTCGGATAAGTCGt > 2:3082612/1‑150 (MQ=255) ttgAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGtt < 2:275079/150‑1 (MQ=255) ttgAGAAAGCAGAGCCGT‑TAATTTTTAC‑AAATAAAAGCCCAGGAAGCCGGGACGGGTAAAGAGTTTAAGCG‑ACAAACGATTCCCGAAGCGACGCAGGCGCGTCTTATACGGCCAACAAACCGCCCCCAAACGTAGGGCGGATAAGGCGtt > 2:453271/1‑150 (MQ=255) gcgaACGCAGAGCCTT‑TAATTTTTCC‑ATAAACCGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCa < 1:2455000/148‑1 (MQ=255) agaAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAc < 2:852683/150‑1 (MQ=255) aaGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCAcgcc < 2:2165598/150‑1 (MQ=255) agagCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCAt < 2:3360116/150‑1 (MQ=255) agagCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCAt < 2:3359195/150‑1 (MQ=255) cgCCGT‑TATTTTTTCC‑ATATAACGGCCCGGTACGCCTGGCCGTATAAAGGGTTTACGCG‑ACAAGGGATGCCCGATGCGACGCTGGCGCGTCTTAGCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc < 1:3276156/149‑1 (MQ=38) cgCCGT‑TAATTTTTCC‑ATAGAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATcc < 1:1712406/149‑1 (MQ=255) agCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGGTAAGGCGTTCACGCCGCATcc > 1:292624/1‑150 (MQ=255) agCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGGCTTATCGGGCCGACAAACGGCCCCGAATCGTAGGTCGGATAATGCGTTCACGCCGCATcc > 1:3275613/1‑150 (MQ=255) ccGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa > 1:1858777/1‑150 (MQ=255) cGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAc > 2:4486424/1‑150 (MQ=255) t‑tAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa > 1:4611589/1‑150 (MQ=255) t‑tAATTTTTCC‑ATAGAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaa < 2:197340/150‑1 (MQ=255) taTTTTTCCAAAATCACGGCCCTGTACGCCTGGACGGATAAAGCTTTTACGCG‑ACAACGGATGCCCGTTGCGACGCGGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACaaa < 1:416561/149‑1 (MQ=38) aaTTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAc > 1:1899139/1‑150 (MQ=255) aTTTTGAC‑ATATAACGGCCCTGTACGCCTGGACGTATAATGCTTTTACGCG‑ACAACGGTTGCCCGATGCGACGCTGGCGCGTCTTATCGGGCATACAAACGGCCCCGAATCGTAGGTCGGATAAGGCTTTCACGCCGCATCCGACAAAcc < 1:1037364/150‑1 (MQ=38) aTTTGTCC‑ATATCCCGGCCCTGGACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAAcc < 2:3971214/150‑1 (MQ=255) tttttCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCa > 2:2318323/1‑150 (MQ=255) tttCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAAGCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATg > 2:3561989/1‑150 (MQ=255) c‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTgg > 2:3447627/1‑150 (MQ=255) c‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTgg > 2:1916038/1‑150 (MQ=255) c‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTgg < 2:3843019/150‑1 (MQ=255) taACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATca > 1:1260353/1‑150 (MQ=255) | GGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGT‑TAATTTTTCC‑ATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG‑ACAACGGATGCCCGATGCGACGCTGGCGCGTCTTATCGGGCCTACAAACGGCCCCGAATCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAAACCATGCTGGATCA > CP009273/169793‑170091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |