| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,520,229 | G→T | 16.7% | intergenic (‑14/‑76) | yfeR ← / → yfeH | transcriptional regulator of yefH/putative inorganic ion transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,520,229 | 0 | G | T | 16.7% | 679.3 / 98.3 | 226 | intergenic (‑14/‑76) | yfeR/yfeH | transcriptional regulator of yefH/putative inorganic ion transporter |
| Reads supporting (aligned to +/- strand): ref base G (88/100); new base T (11/27); total (99/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
CAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTCC > CP009273/2520080‑2520378 | aGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGa > 1:311157/1‑150 (MQ=255) gTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGaa < 2:1703049/150‑1 (MQ=255) tATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTCCTGTGACGACAACCTTTAATTGTTTTAAAGACTAATTCATCTGTTTTCTTCATGCAt > 1:2597739/1‑150 (MQ=255) aTGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATg < 1:282191/150‑1 (MQ=255) tGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATgg > 2:4832277/1‑150 (MQ=255) gATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGa < 2:2653832/150‑1 (MQ=255) aTTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGAt > 1:3866022/1‑150 (MQ=255) ttttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATg < 2:3357444/150‑1 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCa < 2:1660229/150‑1 (MQ=255) ttCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCa < 2:4239070/150‑1 (MQ=255) tCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCaa < 1:4207076/150‑1 (MQ=255) ccAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAAt < 2:2620398/150‑1 (MQ=255) cAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATa < 2:4552333/150‑1 (MQ=255) aGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATaa > 2:616827/1‑150 (MQ=255) ttCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAAt < 2:4702397/150‑1 (MQ=255) tCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATc > 1:1190439/1‑150 (MQ=255) ccTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCa > 1:4742448/1‑150 (MQ=255) ccTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCa > 1:2164697/1‑150 (MQ=255) cTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCaa < 1:2369142/150‑1 (MQ=255) cTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCaa < 2:738508/150‑1 (MQ=255) tCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAAtt < 1:720607/150‑1 (MQ=255) acacTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTACACGACTATAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAAtttt < 2:2493721/150‑1 (MQ=255) cacTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTa > 1:425543/1‑150 (MQ=255) cTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTAtt < 1:3779179/150‑1 (MQ=255) tgtgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTAttt > 2:3697501/1‑150 (MQ=255) tgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTtct < 2:2234601/150‑1 (MQ=255) tgACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTtct < 1:2656940/150‑1 (MQ=255) gACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTtctc < 1:736539/150‑1 (MQ=255) cTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCaa < 1:3532662/150‑1 (MQ=255) cTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCaa < 1:525649/150‑1 (MQ=255) cTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCaa > 2:2986579/1‑150 (MQ=255) cTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCaa > 2:2840926/1‑150 (MQ=255) tCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTTTTtctgatt > 2:2444161/1‑146 (MQ=255) cTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTg < 2:1499025/150‑1 (MQ=255) tGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTgg > 2:634743/1‑150 (MQ=255) gCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGga < 2:2109061/150‑1 (MQ=255) gCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGga < 2:1343513/150‑1 (MQ=255) cGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGgaag < 2:1617071/150‑1 (MQ=255) cTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGaagaag < 2:3220278/150‑1 (MQ=255) cTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGaagaag < 2:1576629/150‑1 (MQ=255) ggCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGca < 2:315780/150‑1 (MQ=255) cTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGcaca < 1:1739074/150‑1 (MQ=255) cAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAAt < 1:1054362/150‑1 (MQ=255) aGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATa < 1:3278928/150‑1 (MQ=255) ggCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAg < 2:1552816/150‑1 (MQ=255) cGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAAc > 2:3615708/1‑150 (MQ=255) gATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAAcc < 1:2986579/150‑1 (MQ=255) gATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAAcc < 1:2840926/150‑1 (MQ=255) aTACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCa < 1:346747/150‑1 (MQ=255) aCGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATc < 1:3431612/150‑1 (MQ=255) aCGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATc < 2:1126924/150‑1 (MQ=255) ctctctCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCg > 2:1282174/3‑150 (MQ=255) cGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCg > 2:1932488/1‑150 (MQ=255) tctcCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGatc > 1:4458450/1‑150 (MQ=255) tctcCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGatc < 2:1003664/150‑1 (MQ=255) tcCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGatcat > 2:751903/1‑150 (MQ=255) tcCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGatcat < 1:1093575/150‑1 (MQ=255) cTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCt < 2:2825015/150‑1 (MQ=255) tGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTg < 2:691536/150‑1 (MQ=255) tGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTg < 1:1021175/150‑1 (MQ=255) gCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTgg > 2:1272192/1‑150 (MQ=255) aCGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAg < 1:616811/150‑1 (MQ=255) cGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGt > 1:1526333/1‑150 (MQ=255) tAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCttt > 1:1016256/1‑150 (MQ=255) ttCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACt > 1:3510340/1‑150 (MQ=255) tcCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACtttt < 2:3551319/150‑1 (MQ=255) tGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCg < 2:2534621/150‑1 (MQ=255) tGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCg < 2:3812502/150‑1 (MQ=255) gcgcTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGt < 2:3287759/150‑1 (MQ=255) gcTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTGTTTCGTAt > 2:4308331/1‑150 (MQ=255) aCTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTAGTATcag > 2:4321088/1‑148 (MQ=255) cTGTGACGAAAAACTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTc < 2:558580/150‑1 (MQ=255) tgtgACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCg < 2:3642969/150‑1 (MQ=255) tgtgACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCg < 1:792529/150‑1 (MQ=255) gACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATc > 1:226850/1‑150 (MQ=255) aCGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATcc > 2:3098418/1‑150 (MQ=255) cGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCt < 2:1029113/150‑1 (MQ=255) aaaaCCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCttt > 1:1315174/1‑150 (MQ=255) aaaaCCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTATTATCATCGATCCttt > 1:3361236/1‑150 (MQ=255) aaCCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCa > 2:2135494/1‑150 (MQ=255) tttAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCtt > 1:4845785/1‑150 (MQ=255) tttAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCtt > 1:4664363/1‑150 (MQ=255) aaTTGTTTTAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAAc < 1:1294421/150‑1 (MQ=255) ttGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAAccc > 1:668597/1‑150 (MQ=255) tGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCt > 1:4525160/1‑150 (MQ=255) gTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTg > 1:1719067/1‑150 (MQ=255) ttttAAAGAATAATTCATCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGa > 1:1866141/1‑150 (MQ=255) aaaGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCAc > 2:4102/1‑150 (MQ=255) aaaGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCAc > 1:1201846/1‑150 (MQ=255) aaaGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCAc > 2:2429050/1‑150 (MQ=255) gAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACggt < 1:2216839/150‑1 (MQ=255) gAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACggt > 1:3962183/1‑150 (MQ=255) taatTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATATAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACggtggt > 1:4077418/1‑150 (MQ=255) aTCTGTTTTCTTCATTAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCt > 1:2772927/1‑150 (MQ=255) tCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTg > 1:3692123/1‑150 (MQ=255) tttCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCctc > 1:4644323/1‑150 (MQ=255) ttcATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCtctttc > 1:3706056/1‑150 (MQ=255) cATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCtctttctt < 1:3226950/150‑1 (MQ=255) gAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTcc > 2:850715/1‑150 (MQ=255) gAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTcc > 2:3530700/1‑150 (MQ=255) | CAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAATAATTCATCTGTTTTCTTCATGAATGGATGCAATAAATCAATTTTATTTCTCAAACTGGAAGAAGCACAATAGAACCATCGATCATCTGGAGTCTTTATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTCC > CP009273/2520080‑2520378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |