| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,536,051 | G→T | 19.3% | I279I (ATC→ATA) | cysP ← | thiosulfate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,536,051 | 0 | G | T | 19.3% | 787.7 / 142.3 | 278 | I279I (ATC→ATA) | cysP | thiosulfate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (97/127); new base T (20/34); total (117/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 292 total aligned reads displayed.
AACTCGCCGCCGCTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCG > CP009273/2535902‑2536199 | aaCTCGCCGCCGCTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGtgatg < 1:1007337/150‑1 (MQ=255) cTCGCCGCCGCTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTgatgat < 1:1947188/150‑1 (MQ=255) tCGCCGCCGCTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCTCCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGatgatg < 1:864532/150‑1 (MQ=255) cgcTGGTGAATTTGGTTTTCATCTCTTCCGGCCATGAGACAAATTTGTATTCCACGCGGAAGAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCTGTAGTAATAGTCGGTGATGATGGTTTgcg < 1:475182/150‑1 (MQ=255) cgcTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTgcg > 1:4825996/1‑150 (MQ=255) cgcTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTgcg > 1:3081952/1‑150 (MQ=255) cTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGcc > 1:1098580/1‑150 (MQ=255) ggTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGACTTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTg > 2:4716311/1‑150 (MQ=255) gTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGc < 2:2688046/150‑1 (MQ=255) gAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCgg > 1:1324891/1‑150 (MQ=255) gAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCgg > 2:2504650/1‑150 (MQ=255) aGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGc > 2:3403614/1‑150 (MQ=255) gTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCt < 2:218427/150‑1 (MQ=255) tGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCta < 2:1982658/150‑1 (MQ=255) ggTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCtata < 2:936531/150‑1 (MQ=255) gTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATag > 2:4435687/1‑150 (MQ=255) ttttCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATaga < 2:62400/150‑1 (MQ=255) ttttCATCAATTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGACTTTGTCTGTCAGTATGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTGTGCGCCTGCGGGCTATaga > 2:767032/1‑150 (MQ=255) tttCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATagag < 1:1771402/150‑1 (MQ=255) tcatcaCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGcc > 2:878366/1‑150 (MQ=255) tcatcaCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGcc > 1:3456595/1‑150 (MQ=255) catcaCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCa > 1:4687571/1‑150 (MQ=255) catcaCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCa < 1:4496240/150‑1 (MQ=255) caCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGtt > 2:1012885/1‑150 (MQ=255) aCTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTc < 2:1650101/150‑1 (MQ=255) cTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCa > 2:4339317/1‑150 (MQ=255) cGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATa < 1:1223981/150‑1 (MQ=255) cGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATa < 2:1597324/150‑1 (MQ=255) gCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAgg < 2:1760726/150‑1 (MQ=255) ccAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGc < 1:2975907/150‑1 (MQ=255) ccAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGc > 1:1496773/1‑150 (MQ=255) cAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCt > 2:2461333/1‑150 (MQ=255) ggAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCttt > 1:4245898/1‑150 (MQ=255) gAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTg < 2:2902234/150‑1 (MQ=255) gAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTg < 2:1930697/150‑1 (MQ=255) gAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTg < 2:1679194/150‑1 (MQ=255) aGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTgg < 1:3645503/150‑1 (MQ=255) gCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTggc > 1:2178625/1‑150 (MQ=255) gCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTggc < 1:463549/150‑1 (MQ=255) gCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTggc < 2:3914142/150‑1 (MQ=255) aaTTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGACTTTGGCGGCt < 1:1419807/150‑1 (MQ=255) aaTTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCt > 1:3978851/1‑150 (MQ=255) aTTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCtt < 2:4036098/150‑1 (MQ=255) tttGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCttt > 2:1471554/1‑150 (MQ=255) ttGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCtttt < 1:4390244/150‑1 (MQ=255) ttGTCGTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCtttt < 1:563407/150‑1 (MQ=255) gTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTc > 2:1276781/1‑150 (MQ=255) tCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTGGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTcc < 2:1804086/150‑1 (MQ=255) tCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTcg < 1:3445251/150‑2 (MQ=255) tCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTcc < 2:1673954/150‑1 (MQ=255) ttCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGt < 2:3966701/150‑1 (MQ=255) tCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTa < 2:2276041/150‑1 (MQ=255) ccACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTAc > 2:2758241/1‑150 (MQ=255) ccACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTAc < 2:2093261/150‑1 (MQ=255) cACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTAcc < 1:3738994/150‑1 (MQ=255) cACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTAcc < 2:4872862/150‑1 (MQ=255) gAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGc < 2:697390/150‑1 (MQ=255) cTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCAc < 2:4168156/150‑1 (MQ=255) cTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCAc < 2:2019103/150‑1 (MQ=255) tCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACg > 1:804797/1‑150 (MQ=255) gTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGttt > 1:2022474/1‑150 (MQ=255) gTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGttt > 2:2041060/1‑150 (MQ=255) cTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGttttt > 2:3205039/1‑150 (MQ=255) cTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGttttt > 1:515790/1‑150 (MQ=255) cTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGttttt < 1:2650422/150‑1 (MQ=255) tGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTa < 2:2713995/150‑1 (MQ=255) cGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATc < 2:1340103/150‑1 (MQ=255) aaTTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAAcc < 1:2791096/150‑1 (MQ=255) aaTTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAAcc < 1:365729/150‑1 (MQ=255) tGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACg > 2:3679219/1‑150 (MQ=255) tCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGcc < 2:2337284/150‑1 (MQ=255) tGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAAtt < 2:1309484/150‑1 (MQ=255) tCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTcc < 2:2378109/150‑1 (MQ=255) ccATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCg < 1:1283171/150‑1 (MQ=255) cATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGc > 1:3193644/1‑150 (MQ=255) aTCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGcc > 2:4294831/1‑150 (MQ=255) tCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCa < 2:3812152/150‑1 (MQ=255) cGGGTTATTCACGCGGTAGTAATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGtt < 1:2001088/150‑1 (MQ=255) cGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGtt < 1:4138799/150‑1 (MQ=255) aTTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGACTTCCGCCAGAATGTTGGtttt > 2:2930960/1‑150 (MQ=255) cACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCgg < 1:1036644/150‑1 (MQ=255) aCGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGa > 2:2152412/1‑150 (MQ=255) gtagtaATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATcac > 1:2836403/1‑150 (MQ=255) agtaATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATcacca < 1:323351/150‑1 (MQ=255) agtaATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATcacca < 1:3351844/150‑1 (MQ=255) agtaATAGTCGGTAATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATcacca < 1:3477337/150‑1 (MQ=255) gtaATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATcaccac < 2:3232042/150‑1 (MQ=255) taATAGTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACt > 1:3615732/1‑150 (MQ=255) tAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCa < 2:154959/150‑1 (MQ=255) gTCGGTGATTATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCaaa > 2:459610/1‑150 (MQ=255) gTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCaaa < 1:3489299/150‑1 (MQ=255) ggTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGcc > 1:2307513/1‑150 (MQ=255) gTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGccc > 2:3607585/1‑150 (MQ=255) gTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGccc > 1:2501792/1‑150 (MQ=255) gTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGccc > 1:540311/1‑150 (MQ=255) tgatgaTGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCt < 1:4065034/150‑1 (MQ=255) tgatgaTGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCt < 2:1198572/150‑1 (MQ=255) tgatgaTGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCt < 2:3581986/150‑1 (MQ=255) gatgatGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTg > 2:825654/1‑150 (MQ=255) tgatgGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTgcg > 1:4794770/1‑150 (MQ=255) | AACTCGCCGCCGCTGGTGAAGTGGGTTTTCATCACTTCCGGCCAGGAGCCAAATTTGTCTTCCACGCGGAACAGCTCGGTCTGCGGGAATTTGTCTTTCAGTTTGTCCATCACCTCCGGGTTATTCACGCGGTAGTAATAGTCGGTGATGATGGTTTGCGCCTGCGGGCTATAGAGCCAGTTCAGATAGGCTTTGGCGGCTTTTTCCGTACCGTTGGCCTGCACGTTTTTATCAACCCACGCCACCGGGAATTCCGCCAGAATGTTGGTTTTCGGAATCACCACTTCAAAGCCCTGCG > CP009273/2535902‑2536199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |