| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,569,336 | C→A | 22.0% | intergenic (‑172/+121) | eutS ← / ← maeB | putative ethanol utilization carboxysome structural protein/malic enzyme: putative oxidoreductase/putative phosphotransacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,569,336 | 0 | C | A | 22.0% | 424.9 / 102.5 | 173 | intergenic (‑172/+121) | eutS/maeB | putative ethanol utilization carboxysome structural protein/malic enzyme: putative oxidoreductase/putative phosphotransacetylase |
| Reads supporting (aligned to +/- strand): ref base C (71/64); new base A (22/16); total (93/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
Only 100 of 175 total aligned reads displayed.
CGTGTATCGTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTGCGCTTCTACCA > CP009273/2569189‑2569485 | cGTGTATCGTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCga < 2:4771786/150‑1 (MQ=255) tATCGTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCACGCGAGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCTCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGatc > 1:1198729/1‑149 (MQ=255) tATCGTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGata > 2:2861945/1‑150 (MQ=255) gTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGAtattat < 2:3341922/150‑1 (MQ=255) aCAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATtatata > 2:2101570/1‑150 (MQ=255) cAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAg < 1:3341027/150‑1 (MQ=255) aaTTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGa < 2:4480464/150‑1 (MQ=255) aTTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGAc > 1:357174/1‑150 (MQ=255) aTTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGAGATTATATAGAc < 1:500968/150‑1 (MQ=255) aTTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGAc > 2:2153566/1‑150 (MQ=255) ttttCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTg < 2:3773827/150‑1 (MQ=255) cGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCttt < 1:4175216/150‑1 (MQ=255) gTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCtttt > 2:2837687/1‑150 (MQ=255) tCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCttttt < 1:2955188/150‑1 (MQ=255) cAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCtttttt < 1:4800868/150‑1 (MQ=255) agagTAAATAACAAAATTCGGCACGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCttttttt > 1:3491814/1‑150 (MQ=255) agagTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCttttttt < 1:4229785/150‑1 (MQ=255) agagTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCttttttt > 1:801080/1‑150 (MQ=255) gagTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCtttttttt < 2:743959/150‑1 (MQ=255) gTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTttat < 2:2789183/150‑1 (MQ=255) aTAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTattatt > 2:4233508/1‑150 (MQ=255) cAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCa < 1:2859103/150‑1 (MQ=255) aaTTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAAc < 1:3123112/150‑1 (MQ=255) aggcGGCAAGCGCGTATAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACt < 2:3742894/147‑1 (MQ=255) tCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCa < 2:3531501/150‑1 (MQ=255) ggCACGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGt > 1:2745902/1‑150 (MQ=255) aaGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATCTTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGtaat > 2:2088481/1‑150 (MQ=255) aGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGtaata < 2:3618463/150‑1 (MQ=255) aGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGtaata > 1:4418727/1‑150 (MQ=255) cgcgTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑g < 1:2520606/150‑1 (MQ=255) gcgTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑Gc > 2:1325533/1‑150 (MQ=255) cgTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCt > 2:2240379/1‑150 (MQ=255) gtatAAAAGGTGAGGTAGATAACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCtt < 2:4566839/147‑1 (MQ=255) ttAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTa > 2:1944467/1‑150 (MQ=255) ttAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTa < 2:292596/150‑1 (MQ=255) ttAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTa > 2:248965/1‑150 (MQ=255) tAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTAc < 1:1989039/150‑1 (MQ=255) tAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTAc < 1:700602/150‑1 (MQ=255) gTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAatat < 2:1460760/150‑1 (MQ=255) gTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAatat < 1:3657591/150‑1 (MQ=255) gAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAatatat > 2:4492334/1‑150 (MQ=255) gAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAatatat > 2:4859371/1‑150 (MQ=255) gAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAatatat > 1:4003461/1‑150 (MQ=255) aGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATAtt > 2:3026212/1‑150 (MQ=255) aGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATAtt < 1:3089547/150‑1 (MQ=255) aGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATAtt < 1:4563554/150‑1 (MQ=255) aGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATAtt < 1:4848388/150‑1 (MQ=255) aGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAg > 1:4554614/1‑150 (MQ=255) gATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGc > 1:312890/1‑150 (MQ=255) aTCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCt < 2:2735940/150‑1 (MQ=255) aTCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCt < 2:1061860/150‑1 (MQ=255) tCACTAAGAATGGAGAGATATTCGCTTTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTa < 2:2442007/150‑1 (MQ=255) tCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTa < 2:4526024/150‑1 (MQ=255) tCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTa < 2:2297449/150‑1 (MQ=255) cACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAAATCAGTAATAA‑GATTTACTAATATATTGCAGCTaa > 1:2713334/1‑150 (MQ=255) tAAGAATGGAGAGATAGTCGCTGTGGTTCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAT‑GCTTTACTAATATATTGCAGCTAAACt < 2:2584912/150‑1 (MQ=255) aGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGc > 1:1748863/1‑150 (MQ=255) gAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCAAATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCt > 1:1475255/1‑150 (MQ=255) aaTGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCtt < 2:3892311/150‑1 (MQ=255) tGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTAATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTAc > 1:3986172/1‑150 (MQ=255) agagaTATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCt > 2:3096192/1‑150 (MQ=255) agagaTATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCt > 2:1418290/1‑150 (MQ=255) atatTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAat > 1:3364814/1‑150 (MQ=255) tatTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAata < 2:643831/150‑1 (MQ=255) tatTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAata < 2:644286/150‑1 (MQ=255) cGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCa > 2:4281291/1‑150 (MQ=255) gCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAg < 2:402675/150‑1 (MQ=255) tgtgGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAggg > 2:1137426/1‑150 (MQ=255) gtggtgCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGt > 2:2899938/1‑150 (MQ=255) tggtgCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTa < 2:801196/150‑1 (MQ=255) cATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGt < 1:1001172/150‑1 (MQ=255) aaaCTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTgag < 2:4636577/150‑1 (MQ=255) aaaCTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTgag > 2:3658618/1‑150 (MQ=255) tttCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGtt > 1:3770084/1‑150 (MQ=255) atGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTaaaaaa < 1:4440354/150‑1 (MQ=255) atGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTaaaaaa < 1:4657443/150‑1 (MQ=255) atGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GATTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTaaaaaa > 1:3878336/1‑150 (MQ=255) tGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTCAGCGTGAGAGTTaaaaaaa > 2:3441417/1‑150 (MQ=255) tGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTaaaaaaa > 2:3263357/1‑150 (MQ=255) tGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTaaaaaaa > 2:3263369/1‑150 (MQ=255) aaCGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAAtt > 2:1305355/1‑150 (MQ=255) cATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAg > 2:4739271/1‑150 (MQ=255) cATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTTAGCGTGAGAGTTAAAAAAAATTACAg > 2:3636326/1‑150 (MQ=255) cATGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAg > 1:2232264/1‑150 (MQ=255) aTGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGc > 2:4332279/1‑150 (MQ=255) aTGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGc > 2:1072649/1‑150 (MQ=255) aTGAATATAAATAAAATAATATAGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGc > 1:4261250/1‑150 (MQ=255) gAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCgg > 1:1441429/1‑150 (MQ=255) atatAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGtt < 1:2837687/150‑1 (MQ=255) aataaaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGtt > 2:154378/1‑150 (MQ=255) aataaaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGtt > 2:4812701/1‑150 (MQ=255) aataaaataaTATCGAGATATTATATAGACTGCTTTTTTTTAATTTTTCCAAAAGAAATAAAAATGCTTTAATAATTTATTGCAGCTAAAATGATTACCCGGATTTTTCAGGTTAAGGTTGGGAGTTAAAAAAATTTACAGCGGTTGGGt > 2:154521/1‑150 (MQ=255) taaaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTg > 1:2725239/1‑150 (MQ=255) taaaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTg > 2:1357226/1‑150 (MQ=255) aaaataaTATCGAGATATTATATAGACTGCTTTTTATTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTgc < 2:2936079/150‑1 (MQ=255) aaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTgcg > 1:175507/1‑150 (MQ=255) aaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTgcg > 1:1101081/1‑150 (MQ=255) aaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTgcg > 1:1042514/1‑150 (MQ=255) aaataaTATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGGTGGGTTTgcg > 1:2604758/1‑150 (MQ=255) atCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTGCGCTTCTAc < 1:2856114/150‑1 (MQ=255) | CGTGTATCGTGACAATTTTTCGTCAGAGTAAATAACAAAATTCGGCAAGCGCGTTTAAAAGGTGAGGTAGATCACTAAGAATGGAGAGATATTCGCTGTGGTGCATAAACTTTCATATGCAACGCATGAATATAAATAAAATAATATCGAGATATTATATAGACTGCTTTTTTTTATTATTCGCAAACTCAGTAATAA‑GCTTTACTAATATATTGCAGCTAAACTGCTTACCCTGAATATTCAGGGTAAGCGTGAGAGTTAAAAAAAATTACAGCGGTTGGGTTTGCGCTTCTACCA > CP009273/2569189‑2569485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |