| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,645,252 | T→A | 19.4% | K132I (AAA→ATA) | yfhM ← | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,645,252 | 0 | T | A | 19.4% | 645.3 / 151.8 | 248 | K132I (AAA→ATA) | yfhM | bacterial alpha2‑macroglobulin colonization factor ECAM; anti‑host protease defense factor; periplasmic inner membrane‑anchored lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (104/96); new base A (25/23); total (129/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 250 total aligned reads displayed.
CGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCA > CP009273/2645103‑2645399 | cGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGtt < 2:3727255/150‑1 (MQ=255) cTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCg < 1:2615646/150‑1 (MQ=255) gCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTc < 1:332348/150‑1 (MQ=255) cAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGa < 1:3165315/150‑1 (MQ=255) cAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGa < 1:734445/150‑1 (MQ=255) cAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGa < 1:4874205/150‑1 (MQ=255) cAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGa > 1:3644563/1‑150 (MQ=255) aGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAg > 2:3621831/1‑150 (MQ=255) aGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAg > 2:3681900/1‑150 (MQ=255) aGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAg < 2:2206619/150‑1 (MQ=255) aGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAg > 2:1868018/1‑150 (MQ=255) cagcGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCg < 1:3172483/150‑1 (MQ=255) gcGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTa < 2:1289572/150‑1 (MQ=255) aaCCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAAc > 1:4534706/1‑150 (MQ=255) aaCCACGGCTGGCAAAACCGACGCTGGGTTGGAGGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAAc > 2:4007323/1‑150 (MQ=255) cACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTa > 2:1175419/1‑150 (MQ=255) cGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAAc < 2:1097729/150‑1 (MQ=255) cGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAAc > 1:173436/1‑150 (MQ=255) ggCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAAct > 2:2375200/1‑150 (MQ=255) cTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAActat < 2:145677/150‑3 (MQ=255) ggCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCttt > 2:3001067/1‑150 (MQ=255) cAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTaa > 2:4179081/1‑150 (MQ=255) aaaaCCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAg < 1:383453/150‑1 (MQ=255) aaaCCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGa < 2:2965026/150‑1 (MQ=255) aCCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGAtt < 1:3300382/150‑1 (MQ=255) aCCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGAtt > 1:1242018/1‑150 (MQ=255) aCCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGAtt > 1:1520032/1‑150 (MQ=255) gACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATc > 1:940495/1‑150 (MQ=255) gACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATc < 1:2443816/150‑1 (MQ=255) aCGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCt > 1:3997588/1‑150 (MQ=255) cGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTg < 2:1538579/150‑1 (MQ=255) cGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTg < 1:3528540/150‑1 (MQ=255) tGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACa > 2:1021058/1‑150 (MQ=255) tGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACa < 1:3669874/150‑1 (MQ=255) ggATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTccc > 2:139440/1‑150 (MQ=255) gATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCa < 1:1139207/150‑1 (MQ=255) gATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCa < 1:1284010/150‑1 (MQ=255) aTGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAg > 1:4704344/1‑150 (MQ=255) tGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAgg > 1:4254914/1‑150 (MQ=255) gTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGc > 1:2091228/1‑150 (MQ=255) ggTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATc > 2:2128924/1‑150 (MQ=255) gTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATcc < 2:810017/150‑1 (MQ=255) aGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCAc > 2:1532966/1‑150 (MQ=255) aGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCAc > 1:4263476/1‑150 (MQ=255) gTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACt > 2:503739/1‑150 (MQ=255) ttATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACtt > 1:549234/1‑150 (MQ=255) tataGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACttt > 2:520575/1‑150 (MQ=255) ataGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTg > 2:696316/1‑150 (MQ=255) taGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGc > 1:2271593/1‑150 (MQ=255) taGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGc < 1:2334620/150‑1 (MQ=255) cGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCtttttt < 2:2787212/150‑1 (MQ=255) tAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTa > 1:1197720/1‑150 (MQ=255) aTCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTAta > 1:4143702/1‑149 (MQ=255) tCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcg < 2:4719164/150‑1 (MQ=255) tCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcg < 1:1946471/150‑1 (MQ=255) cTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcga > 1:802127/1‑150 (MQ=255) cTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcga > 1:3042831/1‑150 (MQ=255) tttACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcgac > 1:881955/1‑150 (MQ=255) ttACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATcgacg > 2:3993282/1‑150 (MQ=255) cTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCgacgacc > 1:3879920/1‑149 (MQ=255) ttatggTTGCGTTTTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACAt < 1:2437600/146‑1 (MQ=255) aaGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGa < 1:4192142/150‑1 (MQ=255) aGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGaa < 1:2797725/150‑1 (MQ=255) aGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGaa > 2:1800726/1‑150 (MQ=255) ggTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAAt > 2:2975785/1‑150 (MQ=255) ttGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATaa < 2:4069833/150‑1 (MQ=255) ttGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATAGACGACAAtaataa > 1:4466387/1‑150 (MQ=255) tGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAc < 2:73381/150‑1 (MQ=255) gCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcg > 2:4790841/1‑150 (MQ=255) cGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcgc > 2:2382506/1‑150 (MQ=255) cGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcgc > 2:1597442/1‑150 (MQ=255) gttgttGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAAcgcg < 1:1280358/150‑1 (MQ=255) tGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATc < 1:1663568/150‑1 (MQ=255) cTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATTAATAAAGCGTGGGAAATCCt > 1:2866331/1‑150 (MQ=255) cTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCt > 1:2969575/1‑150 (MQ=255) cTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCt < 2:2554895/150‑1 (MQ=255) cTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCt > 1:3482680/1‑150 (MQ=255) ttGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGa < 2:1725703/150‑1 (MQ=255) gACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATc > 1:4040922/1‑150 (MQ=255) aCCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATAGACGACATGAATAACGCGTGTGAAATCCTGATcc > 1:2563126/1‑150 (MQ=255) ctcctTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCgg < 1:2535956/150‑1 (MQ=255) ctTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTc > 2:2863704/1‑150 (MQ=255) ctTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTc < 1:2216773/150‑1 (MQ=255) ctTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGGGAGAAATCCTGATACGGGTc > 2:2863733/1‑150 (MQ=255) ttGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCg < 2:3342284/150‑1 (MQ=255) ttGCCAATAGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCg < 2:636297/150‑1 (MQ=255) aaTAGTAACGGTCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAgg > 2:765059/1‑150 (MQ=255) aGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGAt > 2:3465750/1‑150 (MQ=255) aGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGAt < 2:387594/150‑1 (MQ=255) aGTAACGATCAAATCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGAt > 1:1875535/1‑150 (MQ=255) tAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATgg < 2:4605047/150‑1 (MQ=255) cGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGgaga > 2:661360/1‑150 (MQ=255) tCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATAGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACg > 1:3444037/1‑150 (MQ=255) aaaTCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTc > 2:1252785/1‑150 (MQ=255) aaTCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCa < 2:4379496/150‑1 (MQ=255) aaTCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCa > 2:1179317/1‑150 (MQ=255) tCACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGc > 1:1517206/1‑150 (MQ=255) cACGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGACTAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGCTGGAGAACGTCAGCa > 2:3032607/1‑150 (MQ=255) cGTATCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCAcc > 1:951389/1‑150 (MQ=255) gTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATACGGGTCGAGAGGGATGGAGAACGTCAGCACCa > 1:1047458/1‑150 (MQ=255) | CGACTTTGCCAGGCAGCAGCGAACCACGGCTGGCAAAACCGACGCTGGGTTGGATGTCGCGGGTAGTTATAGTTTTTTCGTAATCTTTACTGAAGGTTGCGTTGTTGAGTGCTTTGACCTCCTTGCCAATAGTAACGATCAAATCACGTTTCGGTTCGAGGTGGCGTAAACGTAACTCTTTAAGATTATCTGACAGCTCCCAGGCACCATCCACTTTGCCGCTTTTTTTATCGACGACATGAATAACGCGTGAGAAATCCTGATCCGGGTCGAGAGGGATGGAGAACGTCAGCACCA > CP009273/2645103‑2645399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |