| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,793,412 | G→T | 31.4% | intergenic (‑59/‑93) | ygaC ← / → ygaM | uncharacterized protein/DUF883 family protein, putative membrane‑anchored ribosome‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,793,412 | 0 | G | T | 31.4% | 375.2 / 167.1 | 206 | intergenic (‑59/‑93) | ygaC/ygaM | uncharacterized protein/DUF883 family protein, putative membrane‑anchored ribosome‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (75/65); new base T (33/33); total (108/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.56e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 210 total aligned reads displayed.
GGCGGTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAAT > CP009273/2793263‑2793561 | ggcggTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACg < 2:4074943/150‑1 (MQ=255) ggTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCtt > 2:2536562/1‑150 (MQ=255) ggTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCtt > 2:827060/1‑150 (MQ=255) gTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCttt < 2:3035608/150‑1 (MQ=255) gTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCttt < 1:2577858/150‑1 (MQ=255) ccATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGa < 1:4167191/150‑1 (MQ=255) cATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGaa > 1:3601208/1‑150 (MQ=255) gCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTc > 2:3490222/1‑150 (MQ=255) tttCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTcaa > 2:2617880/1‑148 (MQ=255) tttCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCa > 2:4353771/1‑150 (MQ=255) ttCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCAt < 1:1936173/150‑1 (MQ=255) tCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATa > 1:226947/1‑150 (MQ=255) tCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATa < 1:2306034/150‑1 (MQ=255) tCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATa < 1:3081836/150‑1 (MQ=255) ggTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGc < 2:56099/150‑1 (MQ=255) gTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGcc < 2:510896/150‑1 (MQ=255) aCCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCcgcg > 1:1768499/1‑150 (MQ=255) ccACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGa > 2:1945982/1‑150 (MQ=255) ccACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGa > 2:3522334/1‑150 (MQ=255) ccACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGa > 2:1413796/1‑150 (MQ=255) acaTCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATg < 2:2390885/150‑1 (MQ=255) cGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAAcc < 1:953734/150‑1 (MQ=255) aGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCTTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACCACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAg < 1:4078964/150‑1 (MQ=255) aGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAACGCCGCGATGAACCTCAg > 2:3251601/1‑150 (MQ=255) tAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGtt < 2:2131390/150‑1 (MQ=255) tAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGtt < 2:2295357/150‑1 (MQ=255) aaaCCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTaa > 2:3736780/1‑150 (MQ=255) aCCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGa < 2:756649/150‑1 (MQ=255) ccGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGaa > 1:3927482/1‑150 (MQ=255) cGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACATCAGTTAAGaaa > 1:3366734/1‑150 (MQ=255) gACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGaaaa < 1:3403042/150‑1 (MQ=255) ttCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATgg > 2:4176052/1‑150 (MQ=255) ttCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATgg > 2:674214/1‑150 (MQ=255) aaGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCt < 2:4254035/150‑1 (MQ=255) aaGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCt > 2:729170/1‑150 (MQ=255) gcgcCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGaa < 2:4011891/150‑1 (MQ=255) cgcCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGaaa > 1:1718912/1‑150 (MQ=255) cgcCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGaaa < 2:4092869/150‑1 (MQ=255) cACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAAtt > 2:1564469/1‑150 (MQ=255) cACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAAtt < 1:3196090/150‑1 (MQ=255) aCCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTa > 1:304014/1‑150 (MQ=255) ccTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTAc < 1:4014532/150‑1 (MQ=255) cTCGTCTGGTCTTAAATACATATTTGATCCTCTTTATTATAAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACa < 1:456245/150‑1 (MQ=255) cTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGAGTGCGCATTCACCACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACa < 1:3719640/150‑1 (MQ=255) tCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACAt > 2:813037/1‑150 (MQ=255) tGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTCCCTGTTTGCGCATTCACAACTCTTTCAGAAACGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAAt < 1:1239040/150‑1 (MQ=255) tGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCAGTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAAt < 2:2451868/150‑1 (MQ=255) ggTCGTAATTACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTAAAGAAAAATATGGACTACACTGAAAATTACATCGAAta > 2:2495363/1‑149 (MQ=255) cGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTa > 2:1699260/1‑150 (MQ=255) cGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTa < 1:547684/150‑1 (MQ=255) tAAATACATATTTGATCCTCGTTATTAACAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAAt < 1:1039982/150‑1 (MQ=255) aaaTACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATg > 1:1839742/1‑150 (MQ=255) tACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATgggg > 1:279443/1‑150 (MQ=255) atatTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGAt > 1:1330335/1‑150 (MQ=255) tatTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATc > 1:565008/1‑150 (MQ=255) ttGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCata < 1:4367437/150‑1 (MQ=255) aTCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGt < 1:201738/150‑1 (MQ=255) tCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGtt > 1:4320770/1‑150 (MQ=255) tCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGtt > 1:2398269/1‑150 (MQ=255) tCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGtt > 1:3165651/1‑150 (MQ=255) cTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTa > 2:3845665/1‑150 (MQ=255) cTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTa < 1:2735664/150‑1 (MQ=255) gTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAacc > 1:2237665/1‑150 (MQ=255) gTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAacc > 1:2031094/1‑150 (MQ=255) gTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAacc < 2:1816881/150‑1 (MQ=255) tattatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccga < 2:3393843/150‑1 (MQ=255) tattatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccga > 2:1743480/1‑150 (MQ=255) attatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccgac > 2:101372/1‑150 (MQ=255) attatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccgac < 2:4580690/150‑1 (MQ=255) attatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccgac > 1:3239092/1‑150 (MQ=255) tatCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAaccgaccg < 2:1349841/150‑1 (MQ=255) tCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGaa > 2:3618888/1‑150 (MQ=255) tCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGaa > 2:2395478/1‑150 (MQ=255) cAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAAc < 1:2536562/150‑1 (MQ=255) cAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAAc > 2:4414976/1‑150 (MQ=255) aaCCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAAcc < 2:1133229/150‑1 (MQ=255) aaCCGCGGGCCTACCTTACCTGATTGCGCAGTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAAcc < 2:1132108/150‑1 (MQ=255) aCCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCg < 1:757745/150‑1 (MQ=255) cgcgGGCCTACCTTCCCTGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCa < 2:4210651/150‑1 (MQ=255) cgcgGGCCTACCTTACCTGTTTGCGCATTCACAACGCTTTCAGAAACGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCa < 1:2909738/150‑1 (MQ=255) cgcgGGCCTACCTTACCTGATTCCGCACTCACAACTCTTACAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTATACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCa < 2:4210664/150‑1 (MQ=255) gggCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAacg > 2:875696/1‑150 (MQ=255) gggCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAacg > 1:2263913/1‑150 (MQ=255) gggCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAacg > 1:4715544/1‑150 (MQ=255) cTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGt > 2:1055633/1‑150 (MQ=255) cttacctGATTGCGCATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTtgat > 2:1085341/1‑150 (MQ=255) acctGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTgatgat > 2:600322/1‑150 (MQ=255) acctGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTgatgat > 2:20170/1‑150 (MQ=255) cctGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGatgatg < 2:779572/150‑1 (MQ=255) tGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGc > 2:4491533/1‑150 (MQ=255) tGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGc > 2:1715796/1‑150 (MQ=255) tGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGc < 1:1000436/150‑1 (MQ=255) gcATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAgg < 2:226888/150‑1 (MQ=255) gcATTCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAgg < 2:226961/150‑1 (MQ=255) ttCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTACTGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGata < 2:3535023/150‑1 (MQ=255) tCACAACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGatat > 2:1029633/1‑150 (MQ=255) tCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGatat > 2:3173509/1‑150 (MQ=255) cacaACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATc > 1:4460460/1‑150 (MQ=255) caACTCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCa < 2:1229027/150‑1 (MQ=255) gCTTTCATAAAAGTCCATAACGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTTAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAat < 1:853587/150‑1 (MQ=255) | GGCGGTAACCATACGCTTTCTGGGTTACCACATCGACAGTAAAACCGACTTTTTCAAGTACGCGCGCCACCTCGTCTGGTCGTAAATACATATTTGATCCTCGTTATTATCAACCGCGGGCCTACCTTACCTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATCGAATTCTAATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAAT > CP009273/2793263‑2793561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |