| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,878,668 | G→T | 65.2% | V637V (GTC→GTA) | ygcB ← | R‑loop helicase‑annealase Cas3 needed for Cascade anti‑viral activity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,878,668 | 0 | G | T | 65.2% | 174.3 / 265.6 | 208 | V637V (GTC→GTA) | ygcB | R‑loop helicase‑annealase Cas3 needed for Cascade anti‑viral activity |
| Reads supporting (aligned to +/- strand): ref base G (30/42); new base T (61/75); total (91/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.69e-01 | |||||||||||
Only 100 of 209 total aligned reads displayed.
GCAAAATGGTGGCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAGCTCCTT > CP009273/2878520‑2878817 | gcaAAATGGTGGCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGa > 2:3137054/1‑150 (MQ=255) caAAATGGTGGCAACAGGAATCTCAAACCCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTAc < 2:3925050/150‑1 (MQ=255) aTGGTGGCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTgg < 2:551667/150‑1 (MQ=255) ggtggCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTggat > 1:3386711/1‑148 (MQ=255) tggCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTg > 1:4124769/1‑150 (MQ=255) tggAAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTg < 1:542459/150‑1 (MQ=255) gCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCg < 1:4355997/150‑1 (MQ=255) cAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGa < 1:1176198/150‑1 (MQ=255) aaCAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGAc > 2:2565469/1‑150 (MQ=255) aaCAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGAc < 1:28761/150‑1 (MQ=255) aaCAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGAc < 2:2676304/150‑1 (MQ=255) ggAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGt > 2:1172647/1‑150 (MQ=255) ggAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGt < 2:4866454/150‑1 (MQ=255) ggAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGt < 2:903556/150‑1 (MQ=255) aTCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATc > 1:1219827/1‑150 (MQ=255) tcAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGt > 2:1848826/1‑150 (MQ=255) cAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTc < 1:1083373/150‑1 (MQ=255) cAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTc > 1:3263814/1‑150 (MQ=255) cAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTc > 1:2251253/1‑150 (MQ=255) aaaCCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCa > 2:1048554/1‑150 (MQ=255) aaaCCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCa < 1:2703089/150‑1 (MQ=255) aCCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAAc > 2:2708853/1‑150 (MQ=255) aCCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAAc > 2:1629766/1‑150 (MQ=255) aGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACAtt > 1:1055278/1‑150 (MQ=255) aGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACAtt > 1:2114890/1‑150 (MQ=255) aGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACAtt > 1:3507116/1‑150 (MQ=255) gCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACAttt < 1:317535/150‑1 (MQ=255) cGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTc > 2:3541271/1‑150 (MQ=255) cGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTc < 2:4846071/150‑1 (MQ=255) cGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTc > 1:2312285/1‑150 (MQ=255) gATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTcc > 2:4743042/1‑150 (MQ=255) gATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTcc > 1:4706002/1‑150 (MQ=255) atTTGCGATGAGGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAt < 1:2063287/150‑1 (MQ=255) tttGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAtt > 2:805164/1‑150 (MQ=255) tttGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAtt < 1:4552152/150‑1 (MQ=255) tGCGATGATGGCGATTTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAtttt < 1:834024/150‑1 (MQ=255) tGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAtttt < 2:4724872/150‑1 (MQ=255) gagatgatGGCTATTTAATCGGACAAATCTTTGTAATAGCAAATCTGCAGGAAAATGCTGAGTAATTTACCATTAAAAATCAACGTCGAGTGATTTTTCCACGACCTGGGTTGCGACAAGTTTCCGTCCAACATTTCGCTTCCCAttttt < 1:4029832/148‑1 (MQ=255) gCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAttttt < 1:403935/150‑1 (MQ=255) gCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAttttt < 1:3467465/150‑1 (MQ=255) gCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAttttt < 2:743500/150‑1 (MQ=255) gCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCAttttt < 1:1300534/150‑1 (MQ=255) atgatgGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGcc < 1:938670/150‑1 (MQ=255) tgatgGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCg < 1:2429730/150‑1 (MQ=255) gatgGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGa < 1:3855135/150‑1 (MQ=255) tgGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGaaa < 2:1720803/150‑1 (MQ=255) gCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAAtt < 2:2990577/150‑1 (MQ=255) gCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAAtt < 1:4770280/150‑1 (MQ=255) cGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTg < 2:4396073/150‑1 (MQ=255) cGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTg < 1:750061/150‑1 (MQ=255) gATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAACTCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGc < 2:574198/150‑1 (MQ=255) gATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGc < 2:1890251/150‑1 (MQ=255) tAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCtaat > 1:3551164/1‑150 (MQ=255) tAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGACGAAATTGCtaat > 2:2171398/1‑150 (MQ=255) aaaCGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCtaata > 1:4873479/1‑150 (MQ=255) aaCGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCtaataa < 2:2003543/150‑1 (MQ=255) cGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACt > 1:3283939/1‑150 (MQ=255) ggCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTc < 1:1258668/150‑1 (MQ=255) cAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGAtt < 1:1383939/150‑1 (MQ=255) cAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGAtt > 2:645462/1‑150 (MQ=255) aaTCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATtc > 1:3928054/1‑150 (MQ=255) aaTCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATtc > 1:1466811/1‑150 (MQ=255) aTCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATtct > 2:3288911/1‑150 (MQ=255) aTCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATtct > 2:4301155/1‑150 (MQ=255) cGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTctct > 1:2314519/1‑150 (MQ=255) gTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCtt > 1:3690661/1‑150 (MQ=255) ttGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCttt < 1:2102820/150‑1 (MQ=255) tGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCtttt > 2:3014200/1‑150 (MQ=255) aaaaGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCa < 2:2860898/150‑1 (MQ=255) aGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCacga < 2:714542/150‑1 (MQ=255) aaTCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGAt > 2:1757851/1‑150 (MQ=255) tGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGtt > 2:1322089/1‑150 (MQ=255) aGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAg > 1:4568728/1‑150 (MQ=255) gACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCg > 1:2622326/1‑150 (MQ=255) aCAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGt > 1:253779/1‑150 (MQ=255) cAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTa > 2:3750560/1‑150 (MQ=255) tGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAg < 2:258631/150‑1 (MQ=255) tGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAg > 1:1142704/1‑150 (MQ=255) aaTTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATg < 2:1903245/150‑1 (MQ=255) aaTTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATg < 1:4442950/150‑1 (MQ=255) aTTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGa > 1:4391987/1‑150 (MQ=255) aTTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGa > 1:4392121/1‑150 (MQ=255) aTTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGa < 2:3023864/150‑1 (MQ=255) tAACCAATCAAAATCAACGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGaaa < 1:2038980/150‑1 (MQ=255) cAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTTATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACata < 2:4040293/150‑3 (MQ=255) aatcaaaatcaaCGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAAt > 2:243434/1‑150 (MQ=255) tcaaaatcaaCGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCt > 2:1791356/1‑150 (MQ=255) tcaaaatcaaCGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCt > 2:540864/1‑150 (MQ=255) aaaatcaaCGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCtat < 1:1857375/150‑1 (MQ=255) aaatcaaCGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCtata > 1:2851138/1‑150 (MQ=255) caaCGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTa < 2:3976424/150‑1 (MQ=255) caaCGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTa < 2:2263290/150‑1 (MQ=255) caaCGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTa > 2:21085/1‑150 (MQ=255) cGTCGAGTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACtt < 2:3525533/150‑1 (MQ=255) gTGATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCgtgt < 2:2344066/150‑1 (MQ=255) gATTGTTCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTa < 1:2215578/150‑1 (MQ=255) ttCCACTACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAg < 1:2680936/150‑1 (MQ=255) aCGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAGCTcc < 1:1576460/150‑1 (MQ=255) cGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAGCTCCt < 1:1681218/150‑1 (MQ=255) gACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAGCTCCtt < 2:4138012/150‑1 (MQ=255) | GCAAAATGGTGGCAACAGGAATCTCAAAACCAGCGGGACGATATTTGCGATGATGGCGATGTAAACGGCCCAATCGTTGGAAAAGCAAATCTGCAGGACAATGCTGAGTAATTAACCAATCAAAATCAACGTCGAGTGATTGTTCCACGACCTGGGTTGCGACAAGTATCCGTCCAACATTTCGCTTCCCATTTTTGCCGAAATTGCTAATAACTCGATTCTCTTTTTCACGACGATCGTTCAGCGTAAAGCGCGCATGAAACAAATCTATATCTACTTGCGTGTTATTTAGCTCCTT > CP009273/2878520‑2878817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |