| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,137,675 | C→A | 15.3% | P275P (CCG→CCT) | hybA ← | hydrogenase 2 4Fe‑4S ferredoxin‑type component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,137,675 | 0 | C | A | 15.3% | 653.8 / 83.4 | 214 | P275P (CCG→CCT) | hybA | hydrogenase 2 4Fe‑4S ferredoxin‑type component |
| Reads supporting (aligned to +/- strand): ref base C (83/98); new base A (16/17); total (99/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
Only 100 of 223 total aligned reads displayed.
CGTCTCCTCCGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTA > CP009273/3137527‑3137824 | gTCTCCTCCGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCgg > 2:3065324/1‑150 (MQ=255) gTCTCCTCCGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATAAAGGGTGTGTTGAATATTT‑TAGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCgg > 1:4017671/1‑150 (MQ=255) ctcctcCGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCa < 1:3635156/150‑1 (MQ=255) tcctccGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TAGGAACGCGCACCGGTAGAAAGATAGTCCAGTTTCGGCAg > 2:3420053/1‑150 (MQ=255) tccGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTc < 2:1955782/150‑1 (MQ=255) tccGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTc < 1:2904791/150‑1 (MQ=255) tccGTCGTGATGGTCGTGTTTGGTGTTGCGACGAACCAGCACGGGTAAGCCCCCCAGCACAGCCAGTGGTAGCAACATGCCGTTATACAGGGTGTGTTGAATATTT‑TCGGAACCCGCACCGGTAGAAAGATAGTCCAGTGTCGGCAGGTc > 2:463423/1‑150 (MQ=255) gtGATGGTCGTTTTTTGTGTTGCGACCAAACAGCACCGTTAATCCCCCCACCACACCCAGTGGTAGCAACAAGCCATTATAAACGGTGTGTTGAATATTT‑TAGGAACCCGCACCCGTAGAAACAAAGTCCAGTTTCGGCAGGTCgagaat > 2:3715497/1‑148 (MQ=255) tGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGAttt < 2:3488467/150‑1 (MQ=255) gATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGAtttt < 2:4622/150‑1 (MQ=255) gTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATa < 1:2448568/150‑1 (MQ=255) tCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATaa < 2:2445587/150‑1 (MQ=255) tttGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGcac < 2:4838893/150‑1 (MQ=255) tGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTTGTCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGcaca < 1:3536302/150‑1 (MQ=255) gtgtTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACAccc < 2:4348886/150‑1 (MQ=255) gtTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGt > 2:1685187/1‑150 (MQ=255) gtTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGt > 2:2309474/1‑150 (MQ=255) cACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTg < 2:553267/150‑1 (MQ=255) cACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTg < 1:4372601/150‑1 (MQ=255) aCGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGa < 1:429827/150‑1 (MQ=255) ggTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGt < 1:1411055/150‑1 (MQ=255) ttAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTAc < 1:1041213/150‑1 (MQ=255) tAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTAcc < 2:3775785/150‑1 (MQ=255) tAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTAcc < 2:3949753/150‑1 (MQ=255) aaGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTAccg < 2:4494327/150‑1 (MQ=255) cAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCctc > 2:2888559/1‑150 (MQ=255) cAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCctc < 1:518870/150‑1 (MQ=255) acaGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtc > 1:322185/1‑150 (MQ=255) acaGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtc < 1:3660609/150‑1 (MQ=255) acaGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtc < 1:3092677/150‑1 (MQ=255) acaGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtc > 2:3754864/1‑150 (MQ=255) caGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtct < 2:1276030/150‑1 (MQ=255) aGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTtctc < 2:382330/150‑1 (MQ=255) cAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGcc > 1:3232805/1‑150 (MQ=255) aGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCg > 1:2617531/1‑150 (MQ=255) gTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGt > 1:3145142/1‑150 (MQ=255) tGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTa > 2:4005267/1‑150 (MQ=255) gTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACa < 1:3382206/150‑1 (MQ=255) tAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAg > 1:480933/1‑150 (MQ=255) gCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGAt < 2:692462/150‑1 (MQ=255) gCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGAt < 1:1738596/150‑1 (MQ=255) catcatGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATg < 2:2436286/150‑1 (MQ=255) catcatGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATg > 1:4188437/1‑150 (MQ=255) tcatGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCg > 2:1624703/1‑150 (MQ=255) catGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCgg > 1:4087374/1‑150 (MQ=255) tGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGat < 1:3262656/150‑1 (MQ=255) tGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGat < 2:4673867/150‑1 (MQ=255) ttATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAatat > 2:1012182/1‑150 (MQ=255) ttATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAatat > 2:661489/1‑150 (MQ=255) tataCAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATAtt < 1:4103507/150‑1 (MQ=255) ataCAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATAttt > 2:2066397/1‑150 (MQ=255) taCAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTc < 1:597779/150‑1 (MQ=255) gggTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCa < 2:1726674/150‑1 (MQ=255) gggTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCa < 1:4641002/150‑1 (MQ=255) gggTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCa < 1:1483239/150‑1 (MQ=255) ggTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCAc < 1:787355/150‑1 (MQ=255) ggTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCAc > 1:1623690/1‑150 (MQ=255) gtgtgtTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCAcc > 2:469360/1‑150 (MQ=255) gtgtTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGt < 2:3495962/150‑1 (MQ=255) tgtTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTa < 1:3167768/150‑1 (MQ=255) gtTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTAt < 2:424848/150‑1 (MQ=255) gtTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTAt < 2:646461/150‑1 (MQ=255) gAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCa < 1:4860652/150‑1 (MQ=255) gAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATATCGGCACCGTATGCa > 2:2542814/1‑150 (MQ=255) aaTATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAg < 2:1486665/150‑1 (MQ=255) atTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTa > 1:1732831/1‑150 (MQ=255) ttt‑tCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTaa < 2:17595/150‑1 (MQ=255) t‑tCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAgt < 1:687704/150‑1 (MQ=255) tCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAgtg < 1:4619377/150‑1 (MQ=255) cGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAgtgt < 1:301774/150‑1 (MQ=255) ggAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTc > 2:2647536/1‑150 (MQ=255) aaCGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGc > 1:125153/1‑150 (MQ=255) aaCGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGc > 1:2553860/1‑150 (MQ=255) gcACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGAt < 1:2056964/150‑1 (MQ=255) cACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGAtt > 1:726644/1‑150 (MQ=255) cACCGGTAGAAAGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGAtt < 2:1551180/150‑1 (MQ=255) aCCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGAttt < 1:1508649/150‑1 (MQ=255) aCCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGAttt < 1:4248290/150‑1 (MQ=255) ccGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTc > 2:1494533/1‑150 (MQ=255) ggTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGTTAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAg < 1:3034837/150‑1 (MQ=255) aGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGt < 1:2723804/150‑1 (MQ=255) aaGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTg > 2:2994184/1‑150 (MQ=255) aaGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTg < 2:1858673/150‑1 (MQ=255) aaGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCAGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACATATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTg > 2:1244248/1‑150 (MQ=255) aaGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTg > 1:811181/1‑150 (MQ=255) aGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGa > 2:2364034/1‑150 (MQ=255) aGATCGTCCAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGa < 1:3430139/150‑1 (MQ=255) gATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGAc > 2:1080559/1‑150 (MQ=255) gATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGAc < 2:2042272/150‑1 (MQ=255) aTCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGAcg > 2:4557633/1‑150 (MQ=255) cctCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGAcgcg > 1:996793/3‑150 (MQ=255) cAGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATa > 2:4048678/1‑150 (MQ=255) aGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAg < 1:37943/150‑1 (MQ=255) aGTTTAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAg > 2:4829318/1‑150 (MQ=255) tttAGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTg < 2:1262007/150‑1 (MQ=255) ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTgg < 1:3116438/150‑1 (MQ=255) ttCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTgg < 1:2767715/150‑1 (MQ=255) cGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTa > 2:1577012/1‑150 (MQ=255) cGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTa < 2:3232805/150‑1 (MQ=255) cGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTa > 2:2919122/1‑150 (MQ=255) | CGTCTCCTCCGTCGTGATGGTCGTTTTTGGTGTTGCGACGAACCAGCACGGTTAAGCCCGCCAGCACAGCCAGTGGTAGCATCATGCCTTTATACAGGGTGTGTTGAATATTT‑TCGGAACGCGCACCGGTAGAAAGATCGTCCAGTTTCGGCAGGTCGAGATTTTCATAAGGCACACCCGTCAGTACCAGAACCTGAGTACCGCCGCCCTCTTTCTCGCCGTACAGATGCGGATAATATTTCGGCACCGTATGCAGGTAAGTGTCGCCAGATTTCAGCGTCTGACGCGGATAGTGGTA > CP009273/3137527‑3137824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |