Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,022 G→T 24.7% H68N (CAT→AAT)  ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0220GT24.7% 186.4 / 9.2 107H68N (CAT→AAT) ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base G (51/23);  new base T (7/24);  total (58/49)
Fisher's exact test for biased strand distribution p-value = 2.69e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

TCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAAATAATA  >  CP009273/234873‑235171
                                                                                                                                                     |                                                                                                                                                     
tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTTTTATAGTAATTAAAAATACATg                                                                                                                                                       >  1:2463590/1‑150 (MQ=255)
  cTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGaa                                                                                                                                                     <  2:2145226/150‑1 (MQ=255)
  cTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGaa                                                                                                                                                     <  2:3494834/150‑1 (MQ=255)
    gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAAATATTTTATTATAGTAAGTAAAATTACATGAata                                                                                                                                                   >  1:3600363/1‑150 (MQ=255)
    gtgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAata                                                                                                                                                   <  2:2699329/150‑1 (MQ=255)
     tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATTAaaat                                                                                                                                                  >  1:2855561/1‑150 (MQ=255)
     tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTTAGTATGATTTTATTATAGTAATTAAAAATAAAAGAatat                                                                                                                                                  >  1:2022950/1‑150 (MQ=255)
     tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAATAAATATTTTATTATAGTAAATAAAAATAAATGAatat                                                                                                                                                  >  1:1255966/1‑150 (MQ=255)
     tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATATTAAATAAAAATAAAAGAaaat                                                                                                                                                  >  1:2023718/1‑150 (MQ=255)
     tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGTTTAATAATGATTTTATTATAGTAATTAAAATTAAAAGAataa                                                                                                                                                  >  1:2049383/1‑149 (MQ=255)
         aaaaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaa                                                                                                                                              >  2:1449843/1‑150 (MQ=255)
         aaaaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaa                                                                                                                                              >  2:1449849/1‑150 (MQ=255)
             ggAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAg                                                                                                                                          <  1:1590677/150‑1 (MQ=255)
             ggAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAg                                                                                                                                          <  1:1590830/150‑1 (MQ=255)
             ggAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAg                                                                                                                                          <  1:3387258/150‑1 (MQ=255)
                    ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                                                   <  1:792352/150‑1 (MQ=255)
                    ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                                                   <  1:1712552/150‑1 (MQ=255)
                    ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGTTTAATAATTTTTTTTTTATCGTAAGTAAAAATAAATGAAAATTTAAAAATGAAAACg                                                                                                                                   >  1:1014717/1‑150 (MQ=255)
                    ttAAAGGAGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACg                                                                                                                                   <  1:1712554/150‑1 (MQ=255)
                          gTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGTAAGTAAAATTAAATTAATATTTAAAAAGGAAAACGAAATGa                                                                                                                             >  2:4082578/1‑150 (MQ=255)
                          gTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGa                                                                                                                             >  2:2741399/1‑150 (MQ=255)
                           tGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATTATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGaa                                                                                                                            >  1:1477413/1‑150 (MQ=255)
                           tGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGaa                                                                                                                            >  1:1477423/1‑150 (MQ=255)
                            gCTATTTCGATAGCTATTATTAAAATTATAAGCGGTTGCTGTATTGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTTATTAAGAATTTTTTTATTATCTTAATTAAAATTACATGAATATTTAAAAAGGAAAACGACATGaaa                                                                                                                           <  2:2627204/150‑1 (MQ=255)
                             atataACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTTTGTCTGTGGCGAAATTGCCTCCCTTCGTTTTTTTGATTAAGAATGATTTTTTTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAc                                                                                                                          <  2:695262/149‑1 (MQ=255)
                                   ctatatatattatTAAAATTTTATTTGTTTGTTGTTTTTTTTTTTCTGTGGCTAATTTGACTACCTTGTTTTTTTTTTTTAATAATTTTTTTTTTATCGTAAGTAATTTTAATTTAATTTTTAAAATTTAAAACGACATGAAACCGAAGc                                                                                                                    <  2:2921437/143‑1 (MQ=255)
                                   cGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATAGTAATTAAAAATAAATGAATATTTAAAAAGTAAAAAGACATGTAAaagaaga                                                                                                                    >  1:4843533/1‑149 (MQ=255)
                                   ataTAGATATTATTAAAAATATAATTTTTAGCTTTATTTTTATTTCTTTGGCTAAATTTACTACCTTATTTTTTTTTATTAAGATTTTTTTTATTATCTAAATTAAATTTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGc                                                                                                                    <  2:84072/148‑1 (MQ=255)
                                     aTAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATTAAACCGAAGcac                                                                                                                  >  2:3994297/1‑150 (MQ=255)
                                        gCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTTAGAATTATTTTATTATAGTAAGTAAAAATAAATTAATATTTAAAAAAGAAAAAGAAAAGAAAACGAAAcaaaaa                                                                                                               >  1:2070591/1‑146 (MQ=255)
                                          ttttattaAAAATTTAAGTGTTAGCTTTTTTTTTTTGTCTGTGGCTAATTTGACTACCTTGTTTTTTTTGATTAAGAATTATTTTATTATCGTAATTAAAATTACATTAATTTTTAAAATGGAAAACGACATGAAACCGAAGCACAGAAt                                                                                                             <  1:2756558/148‑1 (MQ=255)
                                            tttttAAAATTATATGTGTTTGCTTTTTTTTTTTGTTTGTGGGTAATTTGAATACTTTGTTTTTTTTTTTTATTAATTTTTTTTTTTTCTTATTTAAATTTAATTTATTTTTTAAAATTTAAAACGACATGAAACCGAAGCACAGAATCa                                                                                                           <  1:1379374/146‑1 (MQ=255)
                                            tttgTAAAAATTTATGTGTTTGTTGTTTTGTTTTGTGTGGGGCGATTTTGACTACCTTTGTTTTTTTGTTTATGATTTTTTTTTTTTTCGTATTTAAATTTACTTTAATTTTTAAAATGGAACACGACATGAAACCGAAGCACAGAATCa                                                                                                           <  1:3839999/147‑1 (MQ=255)
                                            ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAAGAATATTTAAAAAGGAAAACAACATGAAACCGAAGCACAGAATCa                                                                                                           >  2:2774985/1‑150 (MQ=255)
                                              aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTTAAAAGGAAAACGACATGTAACCGAAGCACAGAATCAAc                                                                                                         >  2:4672050/1‑150 (MQ=255)
                                              aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAAc                                                                                                         >  2:2758684/1‑150 (MQ=255)
                                                tAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTTTCGTAAGTAAAAATAAATGAATATTTAAAAAGGAAAAAGACAAGAAACCCAAGCACAGAAAAAACaa                                                                                                       >  1:119514/1‑149 (MQ=255)
                                                 aaaaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAATTATTTTATTATAGTAAGTTAAATTACAATAATATTTAAAAATGAAAAAGAAATGAAAACGAAGCACAGAATCAACaat                                                                                                      >  2:3739582/1‑148 (MQ=255)
                                                   aaaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTGTTAAGAAATATTTTATTATAGTAAGTAAAATTAAAATAATATTTAAAAAGGAAAAACAAATTAAACCCAAGCACACAAACAACAttat                                                                                                    >  1:3041132/1‑148 (MQ=255)
                                                    aaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGAAAAAGACATGAAACCGAAGCACAGAATCAAAATtctc                                                                                                   >  2:2498584/1‑150 (MQ=255)
                                                    aaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATtcta                                                                                                   >  2:3050454/1‑149 (MQ=255)
                                                    aaTATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACGAAGCACAGAATCAAAATtctc                                                                                                   >  2:2497805/1‑150 (MQ=255)
                                                           tttttAGCTTTTTTTTTTTGTCTGTGGCTAATTTGAATACATTCTTTTTTTTTATTAACAATTATTTTATTATCGTAATTAAAATTAAATTAATTTTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCAt                                                                                            <  1:4199805/147‑1 (MQ=255)
                                                              ttAGTTGTATTGTTATGTCTGTGGCTAAATTGAATACCTTCTTTTTTTTGATTAATAATGATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaaa                                                                                         <  2:2690407/150‑1 (MQ=255)
                                                               tAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaaaa                                                                                        >  2:275961/1‑150 (MQ=255)
                                                                aGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAat                                                                                       <  2:1816508/150‑1 (MQ=255)
                                                                  gtGTTTTGTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTGTTTAAGAATTATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                                     <  2:4504979/149‑1 (MQ=255)
                                                                   tGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAATTATTTTATTATCGTAAGTAAAATTAAAAGAATATTTAAAAATGAAAAAGACAAGAAAACGAAGCACAGAATAAACAATATCCAAAAATAAAATAtt                                                                                    >  1:1767368/1‑150 (MQ=255)
                                                                    gttttGTTTTTTCTGTGGCTAATTTGACTACCTTCTTTTTTTTTATTAATAATTATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATAttt                                                                                   <  2:3307168/147‑1 (MQ=255)
                                                                      aTTGTAATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAATTTAAAATAAAAGAATATTTAAAAATTAAAAAAACAGGAAAACGAAGCAAACAAACAACAATATACAAACAAAAAAAAtttaa                                                                                 >  1:1013440/1‑148 (MQ=255)
                                                                       tttttATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTTATTAAGAATGATTTTATTATCGTAATTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCg                                                                                <  2:1401372/147‑1 (MQ=255)
                                                                        tGTTTTGTGTGTGGCTAATTTGACTACCTTGTTTTTTTTTTTTAAGATTTATTTTTTTATCTTATTTAAATTTACATGAATATTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGt                                                                               <  1:2748866/150‑1 (MQ=255)
                                                                        tGTTATGTGTGTGGCGAATTTGACTACCTTCGTTTTTTTGATTAAGAATGTTTTTTTTTTCGTATGTAAAATTACTTGAATTTTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGt                                                                               <  1:2748870/150‑1 (MQ=255)
                                                                         gTTATTTGTGTGGCTAAATTGACTACTTTCGTTTTTTTTATAAACATTTATTTTATTATCTTAATTAAAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTg                                                                              <  2:3317251/150‑1 (MQ=255)
                                                                         gTTATGTCTGTGGCTAAATTGACTACCTTCTTTTTTTTTATTAATAATGATTTTATTATCGTAATTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTg                                                                              <  2:882784/150‑1 (MQ=255)
                                                                             tGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGc                                                                          >  2:1543976/1‑150 (MQ=255)
                                                                              gTCTGTGGCGAATTTGACTACCTTCGTTTTTTTGATTAATAATTTTTTTTTTTTCTTAAGTAAAATTAAATGATTATTTAAAATGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCa                                                                         <  2:3829850/150‑1 (MQ=255)
                                                                               tCTGTGGCGAATTTGACTACCTTCTTTTTTTTTATTAATATTTTTTTTATTATCGTAATTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCAt                                                                        <  1:4276807/150‑1 (MQ=255)
                                                                                 tgtgGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATAGTAAGTAAAATTAAAATAATATTTAAAAATGAAAAACACATGAAACAGAATCACAGAATAAACAATCACCAATAATAAAATATTTAAGTGGAGCAttt                                                                      >  1:1758648/1‑150 (MQ=255)
                                                                                 tgtgGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTTTTATCGTAAGTAAAATTACATGAATTTTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCAttt                                                                      <  2:1152177/150‑1 (MQ=255)
                                                                                        aaaTTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAAGAATATTTAAAAAGGAAAACGACAAGAAACCCAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTattatt                                                               >  2:2482913/1‑150 (MQ=255)
                                                                                         aaTTGACTACCTTCGTTTTTTTGATTAAGAATTATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACAAGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTg                                                              >  2:634414/1‑150 (MQ=255)
                                                                                            ttccTACCTTCGTTTTTTGGATTAAGAATGATTTTATTATCGTACGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAat                                                           <  2:4864015/147‑1 (MQ=255)
                                                                                                  ccTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATagag                                                     <  2:3630951/150‑1 (MQ=255)
                                                                                                   cttcttTTTTTTTATTAATATTGATTTTATTATCGTAATTAAAATTACATGAATATTAAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                                    <  2:4557269/150‑1 (MQ=255)
                                                                                                   cTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                                    >  2:3616215/1‑150 (MQ=255)
                                                                                                   cTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                                    >  2:3616208/1‑150 (MQ=255)
                                                                                                    ttCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                                                   >  1:1181400/1‑150 (MQ=255)
                                                                                                      tgTTTTTTTTATTAAGAATGATTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                                 <  1:1449843/149‑1 (MQ=255)
                                                                                                      ctttttttttATAAATAATTTTTTTATTATCTTAATTAAATTTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                                 <  1:1449849/148‑1 (MQ=255)
                                                                                                         ttttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGATATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAAc                                              <  1:2742852/150‑1 (MQ=255)
                                                                                                                aTTAATAATTATTTTTTTATCTTAAGAAAAATTACATTAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                                       <  2:4521076/150‑1 (MQ=255)
                                                                                                                aTTAATAATTATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                                       <  2:2070591/150‑1 (MQ=255)
                                                                                                                   aaGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGTATATAGAGGTTTAACTCCGGTaatt                                    >  2:4698034/1‑148 (MQ=255)
                                                                                                                   aaGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaa                                    >  1:3293303/1‑150 (MQ=255)
                                                                                                                   aaGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaa                                    >  1:3293164/1‑150 (MQ=255)
                                                                                                                    aGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaaa                                   >  1:2453579/1‑150 (MQ=255)
                                                                                                                    aGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTaaaaa                                   >  1:4517158/1‑150 (MQ=255)
                                                                                                                        tGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACaa                               >  2:1683298/1‑150 (MQ=255)
                                                                                                                            ttttttATATTAAGAAAAATTAAATTAATATTTAAAAATCAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaagaa                           <  1:3247608/150‑1 (MQ=255)
                                                                                                                              tattatCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGc                         >  1:3352817/1‑150 (MQ=255)
                                                                                                                                     ttaattaaAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt                  <  1:276822/149‑1 (MQ=255)
                                                                                                                                     ttaagtaaATTTACTTTAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt                  <  1:4585256/149‑1 (MQ=255)
                                                                                                                                     gtaagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt                  >  1:285701/1‑150 (MQ=255)
                                                                                                                                     gtaagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAAt                  >  1:285421/1‑150 (MQ=255)
                                                                                                                                      taagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTAGTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATg                 >  1:3530642/1‑150 (MQ=255)
                                                                                                                                       aagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGc                >  1:1847276/1‑150 (MQ=255)
                                                                                                                                       aagtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGc                >  1:4483974/1‑150 (MQ=255)
                                                                                                                                        tttaaAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCa               <  1:626023/148‑1 (MQ=255)
                                                                                                                                         taaaaaTTACATAAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATAATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg              <  2:975701/148‑1 (MQ=255)
                                                                                                                                           aaaaTTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAggg            >  2:1838860/1‑150 (MQ=255)
                                                                                                                                           aaaaTTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAggg            >  2:1838709/1‑150 (MQ=255)
                                                                                                                                               ttAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGaaaa        <  1:2785362/150‑1 (MQ=255)
                                                                                                                                                  cATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAaata     <  2:2022950/150‑1 (MQ=255)
                                                                                                                                                  aaTGAATTTTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAaata     <  2:2023718/149‑1 (MQ=255)
                                                                                                                                                   aTGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAaataa    >  1:3457556/1‑150 (MQ=255)
                                                                                                                                                   aTGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAaataa    >  1:3457357/1‑150 (MQ=255)
                                                                                                                                                    tGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAaataat   >  2:1112872/1‑150 (MQ=255)
                                                                                                                                                    tGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAGTGAATGCAGGGAAAaataat   >  1:3598595/1‑150 (MQ=255)
                                                                                                                                                     gAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAAataata  >  1:3736413/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAAATAATA  >  CP009273/234873‑235171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: