| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,190,143 | C→A | 15.0% | intergenic (‑31/+17) | hldE ← / ← glnE | fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase/fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,190,143 | 0 | C | A | 15.0% | 970.9 / 118.9 | 305 | intergenic (‑31/+17) | hldE/glnE | fused heptose 7‑phosphate kinase/heptose 1‑phosphate adenyltransferase/fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base C (127/132); new base A (29/17); total (156/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
CGGGCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAGCGTAGTGTAA > CP009273/3189995‑3190292 | cGGGCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTgcgcg < 1:4183815/150‑1 (MQ=255)cGGGCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTgcgcg < 1:1555944/150‑1 (MQ=255) gggCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTgcgcgc > 2:2431825/1‑150 (MQ=255) gggCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTgcgagc > 1:3203781/1‑150 (MQ=255) gCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGa < 1:4716797/150‑1 (MQ=255) cACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGat > 2:331176/1‑150 (MQ=255) aCCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGata < 2:343632/150‑1 (MQ=255) aCCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGata > 2:4239110/1‑150 (MQ=255) aCCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGata < 2:637530/150‑1 (MQ=255) ccGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGataa < 1:1185742/150‑1 (MQ=255) cGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGataat > 2:1216490/1‑150 (MQ=255) ggCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGataata < 2:1410335/150‑1 (MQ=255) gcgcTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATAc < 2:4194296/150‑1 (MQ=255) cgcTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATAcc > 2:3861605/1‑150 (MQ=255) gcTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCa > 1:2152727/1‑150 (MQ=255) gcTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCa < 1:3933307/150‑1 (MQ=255) gcTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCa < 1:4387183/150‑1 (MQ=255) ttCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCAACACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATa > 2:2995874/1‑150 (MQ=255) tCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATAc > 1:2063000/1‑150 (MQ=255) cGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAt < 2:1923096/150‑1 (MQ=255) agaTACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAttc > 1:3588434/1‑150 (MQ=255) gaTACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAttct < 2:95303/150‑1 (MQ=255) aTACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAttctt > 2:808637/1‑150 (MQ=255) aTACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCAttctt < 2:4411352/150‑1 (MQ=255) aNACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCGCCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAttctt > 1:2764335/1‑150 (MQ=255) tACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCAttcttc > 1:2169495/1‑150 (MQ=255) aCGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTcc > 2:286472/1‑150 (MQ=255) cGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTcca < 1:3006833/150‑1 (MQ=255) aCTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTccacc < 1:4495228/150‑1 (MQ=255) tggtggGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAg < 1:4817609/150‑1 (MQ=255) gtggGGCCGTACCAGTAACGATCCAGCATCACATCGCCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGcc < 2:2764335/150‑1 (MQ=255) tggGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCa > 1:3609265/1‑150 (MQ=255) tggGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCa > 1:1741418/1‑150 (MQ=255) gggCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACt < 2:823473/150‑1 (MQ=255) ggCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACtt > 1:4284356/1‑150 (MQ=255) gCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTc > 2:3390205/1‑150 (MQ=255) gTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCtt > 1:2665397/1‑150 (MQ=255) tAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTg < 2:66025/150‑1 (MQ=255) aCGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGcc < 1:2637731/150‑1 (MQ=255) gATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCg > 1:3835171/1‑150 (MQ=255) gATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCg < 1:1040138/150‑1 (MQ=255) ccAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAAGACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCAc < 2:1247392/150‑1 (MQ=255) aGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCATCCACTTCTGCCAGCTTGCCCGCACCa > 2:2006038/1‑150 (MQ=255) cacatcacCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCa < 1:2516320/150‑1 (MQ=255) cacatcacCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCa > 1:2616000/1‑150 (MQ=255) acatcacCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCAc > 1:4072047/1‑150 (MQ=255) acatcacCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCAc > 2:779566/1‑150 (MQ=255) atcacCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGc > 1:3489362/1‑150 (MQ=255) aaccaCCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCg > 1:2414415/1‑150 (MQ=255) aTCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGc > 1:2429304/1‑150 (MQ=255) aTCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGc < 1:1117653/150‑1 (MQ=255) tCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCa < 1:808646/150‑1 (MQ=255) tCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCa > 2:2705057/1‑150 (MQ=255) ccTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAAtcct > 2:181152/1‑150 (MQ=255) ccTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAAtcct < 2:1967061/150‑1 (MQ=255) gCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCg < 1:2915558/150‑1 (MQ=255) gCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCg < 2:3590176/150‑1 (MQ=255) cGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGaca > 2:1080730/1‑150 (MQ=255) tCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAAGACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACAt < 1:132001/150‑1 (MQ=255) aaaCTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATgg > 2:1530744/1‑150 (MQ=255) aCTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGcc > 1:692145/1‑150 (MQ=255) aCTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGcc > 2:21476/1‑150 (MQ=255) ggCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCa > 1:4480280/1‑150 (MQ=255) ggCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCa > 2:4046670/1‑150 (MQ=255) cAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAAt < 2:428604/150‑1 (MQ=255) aGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAAtt > 2:479046/1‑150 (MQ=255) gCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTc < 1:3643341/150‑1 (MQ=255) cGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTcc > 1:3698894/1‑150 (MQ=255) gTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCt > 2:3602166/1‑150 (MQ=255) ttACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTg > 1:1921247/1‑150 (MQ=255) tACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGt > 1:1766947/1‑150 (MQ=255) aCTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTa < 1:2731828/150‑1 (MQ=255) aCTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTa > 2:2386559/1‑150 (MQ=255) aCTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTa > 2:2215536/1‑150 (MQ=255) tttCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAAt < 2:4426178/150‑1 (MQ=255) tCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGc < 2:2948069/150‑1 (MQ=255) cATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGcc > 2:2402366/1‑150 (MQ=255) aTTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCa < 2:70904/150‑1 (MQ=255) tCCTGTCTCCTGAGAGATTCAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAga > 1:3230915/1‑150 (MQ=255) cTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAgatg < 1:2032978/150‑1 (MQ=255) cTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAgatg < 2:3489362/150‑1 (MQ=255) tGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAgatga < 1:1581457/150‑1 (MQ=255) tctcCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGatgatg < 1:331176/150‑1 (MQ=255) cTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGt < 2:1741418/150‑1 (MQ=255) tGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGtt > 2:3567579/1‑150 (MQ=255) gagagaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTc > 1:3669579/1‑150 (MQ=255) agagaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCa < 2:4562168/150‑1 (MQ=255) gagaTTCAAAATTGGCGAGCGATAATACCATACTTCATTCGTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCAt < 2:3800431/150‑1 (MQ=255) agaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATc < 2:2932381/150‑1 (MQ=255) agaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATc < 2:499864/150‑1 (MQ=255) gaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATcg > 2:3745195/1‑150 (MQ=255) gaTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATcg < 1:340627/150‑1 (MQ=255) aTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATcgc > 1:3877755/1‑150 (MQ=255) aTTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATcgc > 1:4097031/1‑150 (MQ=255) cAAAATTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGaa > 2:2354126/1‑150 (MQ=255) aaaaTTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAg > 2:3582916/1‑150 (MQ=255) aaaaTTTGCGAGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAg > 2:1023981/1‑150 (MQ=255) aaaTTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAGc > 1:1224280/1‑150 (MQ=255) aTTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAGCGt > 1:4875294/1‑150 (MQ=255) cgcgATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAGCGTAGTGTaa < 1:1468107/150‑1 (MQ=255) | CGGGCACCGGCGCTTCCGGCGAGATACGACTGGTGGGGCCGTACCAGTAACGATCCAGCATCACATCACCAACCACCATCACTCCTGCACGTTCAAACTCTGGCAGCGTTACTTTCATTCCTGTCTCCTGAGAGATTCAAAATTTGCGCGCGATAATACCATACTTCATTCTTCCACCAGCCACTTCTGCCAGCTTGCCCGCACCAGTTCACGCTCTGCGGTGAAGCAATCCTCCGACACATGGCCCGGCAATTCCTGTAATGCCAGATGATGAAGTTCATCGCGAAGCGTAGTGTAA > CP009273/3189995‑3190292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |