| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,324,553 | C→A | 27.4% | A187A (GCG→GCT) | obgE ← | GTPase involved in cell partioning and DNA repair |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,324,553 | 0 | C | A | 27.4% | 598.0 / 222.6 | 283 | A187A (GCG→GCT) | obgE | GTPase involved in cell partioning and DNA repair |
| Reads supporting (aligned to +/- strand): ref base C (104/101); new base A (36/42); total (140/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
CGTTCCAGGTGCTTCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGCCGCGG > CP009273/3324404‑3324702 | cGTTCCAGGTGCTTCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATcc > 2:2390499/1‑150 (MQ=255) aGGTGCTTCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAAGCCGCCACt > 2:4225007/1‑150 (MQ=255) tGCTTCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTc < 1:4304087/150‑1 (MQ=255) tCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGtt < 1:4231079/150‑1 (MQ=255) tCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGtt < 2:1072032/150‑1 (MQ=255) cAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGttt < 2:173142/150‑1 (MQ=255) tggATGCGTATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCATCATCGAAGCTCTTTTGGTTGTCCTTTCGTACCACTCCCAGTCTTGGCACCTGAGTGGTAAACGGATAATCAGCCTCTTTCGGTTTa < 1:1002792/149‑1 (MQ=255) aGGAAGCGAATGCCCAGACCTGCGCCTTCCGCATCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTa < 1:4822370/150‑1 (MQ=255) aGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTa > 1:3862910/1‑150 (MQ=255) aGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTa > 2:2724250/1‑150 (MQ=255) gAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAgc > 2:4512862/1‑150 (MQ=255) aaGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAgcc < 2:2137050/150‑1 (MQ=255) gCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAgccgc < 2:3401506/150‑1 (MQ=255) cGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAgccgcc > 1:502457/1‑150 (MQ=255) gAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGccgccg > 1:2576539/1‑150 (MQ=255) gAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGccgccg > 2:4605090/1‑150 (MQ=255) aaTGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGa > 1:3500862/1‑150 (MQ=255) aTGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGAt > 2:2243020/1‑150 (MQ=255) cccAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATAcc < 1:2020968/150‑1 (MQ=255) cccAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATAcc > 2:1659615/1‑150 (MQ=255) gACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCAc < 1:2534666/150‑1 (MQ=255) tGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAAt < 1:4328173/150‑1 (MQ=255) gcgcCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATa < 2:3084818/150‑1 (MQ=255) ccTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAg < 1:237722/150‑1 (MQ=255) cTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAgg > 1:4046393/1‑150 (MQ=255) cTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAgg < 1:803345/150‑1 (MQ=255) ccGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCg < 1:4495721/150‑1 (MQ=255) ccGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCg < 2:1514361/150‑1 (MQ=255) cGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGa > 2:3299047/1‑150 (MQ=255) cAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGAtt < 2:2317346/150‑1 (MQ=255) cAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGAtt < 2:3390958/150‑1 (MQ=255) aGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGAttt > 2:2767196/1‑150 (MQ=255) aGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGAttt < 1:3811820/150‑1 (MQ=255) cgcCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTAc < 1:3323659/150‑1 (MQ=255) gcCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTAcc > 1:3202652/1‑150 (MQ=255) aaTCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGtt > 2:3207703/1‑150 (MQ=255) aTCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGttt < 1:3459901/150‑1 (MQ=255) tCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTg > 2:4691813/1‑150 (MQ=255) tCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTg < 1:1978136/150‑1 (MQ=255) tCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTg < 1:407954/150‑1 (MQ=255) tCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTg < 2:793042/150‑1 (MQ=255) cAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTgg < 1:1413904/150‑1 (MQ=255) cAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTgg > 1:148022/1‑150 (MQ=255) cAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTgg > 1:148954/1‑150 (MQ=255) ggAATATCGTCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATcccc < 1:3621135/150‑1 (MQ=255) ggAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATcccc < 1:2784389/150‑1 (MQ=255) aaTATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCaa < 2:2688430/150‑1 (MQ=255) atatCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAAc < 2:3617661/150‑1 (MQ=255) atCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACAt < 1:3750989/150‑1 (MQ=255) cGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATAc > 1:630479/1‑150 (MQ=255) aacaacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGAc > 2:3113944/1‑150 (MQ=255) aacaacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGAc > 2:3159877/1‑150 (MQ=255) aacaacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGAc > 2:3791509/1‑150 (MQ=255) aacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTc > 2:90467/1‑150 (MQ=255) aacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTc > 1:563484/1‑150 (MQ=255) aacGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTc > 1:2408263/1‑150 (MQ=255) gAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTcagc > 2:1546864/1‑150 (MQ=255) gAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGATTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTAGGCATCCCCAACATACCGACGTcagc > 2:2886915/1‑150 (MQ=255) gAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTcagc > 1:3529325/1‑150 (MQ=255) aaGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTcagcc < 2:2621560/150‑1 (MQ=255) aGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTcagcca < 1:2699706/150‑1 (MQ=255) gCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTcagccag < 2:1126915/150‑1 (MQ=255) ttttCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCagcagc < 1:1576963/150‑1 (MQ=255) tttCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAgcagca < 2:4374840/150‑1 (MQ=255) tCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATc < 2:4639083/150‑1 (MQ=255) cGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCa < 1:2151403/150‑1 (MQ=255) gTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAg < 2:2169272/150‑1 (MQ=255) tGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCt > 1:2961110/1‑150 (MQ=255) gTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTc > 1:1062110/1‑150 (MQ=255) cATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCcag > 2:4755485/1‑150 (MQ=255) gTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCcagcagca < 1:2457016/150‑1 (MQ=255) tACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCcagcagcag < 2:1209440/150‑1 (MQ=255) tACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCcagcagcag < 2:2458503/150‑1 (MQ=255) aCCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCagcagcagc > 2:1808761/1‑150 (MQ=255) cacaCCCAGACTTGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTc < 1:39197/150‑1 (MQ=255) acCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTcgcg < 1:1711396/150‑1 (MQ=255) ccAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCt < 2:2646637/150‑1 (MQ=255) ccAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCt < 1:4423852/150‑1 (MQ=255) tGGCACCAGAGTGGTAAACGGATAATCAGCCACTTTCTGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCTACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGcc < 1:1877963/150‑1 (MQ=255) gCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCg > 1:2347951/1‑150 (MQ=255) cACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCgg > 2:653603/1‑150 (MQ=255) ccAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCg < 1:2804860/150‑1 (MQ=255) cAGAGTGGTAAACTGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGt < 1:2243020/150‑1 (MQ=255) cAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGt > 1:4478261/1‑150 (MQ=255) cAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGt < 2:2961110/150‑1 (MQ=255) agTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGcc < 2:514892/150‑1 (MQ=255) gTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTg < 1:1609659/150‑1 (MQ=255) tAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTgg > 2:3830965/1‑150 (MQ=255) aaaCGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGt < 1:1319874/150‑1 (MQ=255) aaaCGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGt > 1:4618439/1‑150 (MQ=255) aaCGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGtt > 1:4367555/1‑150 (MQ=255) cGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGtttt < 2:2261712/150‑1 (MQ=255) ggATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTc < 1:3675534/150‑1 (MQ=255) ggATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTc > 2:4048427/1‑150 (MQ=255) tAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGc < 2:982632/150‑1 (MQ=255) tAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGc > 1:3401214/1‑150 (MQ=255) tAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGc > 1:1199175/1‑150 (MQ=255) tAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGc > 1:3950406/1‑150 (MQ=255) aaTCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGcc < 1:1151835/150‑1 (MQ=255) aTCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGCcg > 2:3471228/1‑150 (MQ=255) | CGTTCCAGGTGCTTCAGGAAGCGAATGCCCAGACCTGCGCCTTCCGCAGCGCCTTCAATCAGTCCTGGAATATCGGCAACAACGAAGCTCTTTTCGTTGTCCATTCGTACCACACCCAGACTTGGCACCAGAGTGGTAAACGGATAATCCGCCACTTTCGGTTTAGCCGCCGATACCGCACGAATAAAGGTCGATTTACCCGCGTTTGGCATCCCCAACATACCGACGTCAGCCAGCAGCATCAGCTCCAGCAGCAGCTCGCGCTTATCGCCCGGCGTGCCGTTGGTTTTCTGCCGCGG > CP009273/3324404‑3324702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |