| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,386,399 | C→A | 6.4% | T1073T (ACG→ACT) | yhdP ← | DUF3971‑AsmA2 domains protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,386,399 | 0 | C | A | 6.4% | 1046.5 / 34.1 | 278 | T1073T (ACG→ACT) | yhdP | DUF3971‑AsmA2 domains protein |
| Reads supporting (aligned to +/- strand): ref base C (127/133); new base A (11/7); total (138/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
CCGGCATGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGTCAGCGT > CP009273/3386250‑3386548 | cGGCATGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGcgtcg < 1:518744/150‑1 (MQ=255) ggCATGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGcgtcgt < 1:111548/150‑1 (MQ=255) aTGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGac > 2:1812011/1‑150 (MQ=255) tGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGaca < 1:1864264/150‑1 (MQ=255) tGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGaca < 1:2079005/150‑1 (MQ=255) ccGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCa < 1:361184/150‑1 (MQ=255) cGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCaa < 1:3873744/150‑1 (MQ=255) aTTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCaaaaaa > 2:2562811/1‑150 (MQ=255) tGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAAtt < 2:474969/150‑1 (MQ=255) gATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTc < 2:1999324/150‑1 (MQ=255) gATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTc < 2:2082771/150‑1 (MQ=255) aTTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCt < 2:4810034/150‑1 (MQ=255) aTTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCt > 1:4572333/1‑150 (MQ=255) tttCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTg < 2:3860008/150‑1 (MQ=255) ttCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgc > 1:448162/1‑150 (MQ=255) ttCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgc < 1:4303926/150‑1 (MQ=255) ttCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgc < 1:1617139/150‑1 (MQ=255) tCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgcg > 2:3630922/1‑150 (MQ=255) tCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgcg > 2:1438993/1‑150 (MQ=255) tCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTAGTGACACCAAAAAATTCTgcg < 1:2567793/150‑1 (MQ=255) cGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgcgg < 1:546363/150‑1 (MQ=255) gTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTgcggcg > 1:649409/1‑150 (MQ=255) gTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTATgcggcg > 1:3253778/1‑150 (MQ=255) tAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGcggcgg < 2:2218807/150‑1 (MQ=255) gCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAAt > 1:916843/1‑150 (MQ=255) ccTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAAtt < 1:3469436/150‑1 (MQ=255) cTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAAttt < 1:4757196/150‑1 (MQ=255) tACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCt > 1:1929515/1‑150 (MQ=255) tACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCt > 2:2984043/1‑150 (MQ=255) cAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGccc < 2:1565792/150‑1 (MQ=255) gAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCa < 2:1686357/150‑1 (MQ=255) gAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCa < 2:4141864/150‑1 (MQ=255) atgaatgaTGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGttt > 1:3560059/1‑150 (MQ=255) atgaatgaTGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGttt < 2:2159388/150‑1 (MQ=255) tgaatgaTGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGtttt > 1:981921/1‑150 (MQ=255) aatgaTGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTcc < 1:4101655/150‑1 (MQ=255) tgatgCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCtt < 2:1528915/150‑1 (MQ=255) tgCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCa > 2:2709039/1‑150 (MQ=255) gCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAg < 1:1525059/150‑1 (MQ=255) gCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAg > 1:2392644/1‑150 (MQ=255) cATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCg > 2:191545/1‑150 (MQ=255) ttCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAg < 1:1082198/150‑1 (MQ=255) ttCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAg < 1:1081979/150‑1 (MQ=255) ttCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAg > 1:3945086/1‑150 (MQ=255) cAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGt > 1:2135614/1‑150 (MQ=255) cAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGt > 2:3291134/1‑150 (MQ=255) aaCGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTa < 2:4009279/150‑1 (MQ=255) aaCGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTa < 2:2901565/150‑1 (MQ=255) cGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACg < 1:1640313/150‑1 (MQ=255) cTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCAt < 2:2406994/150‑1 (MQ=255) ttCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCAtt > 1:2279086/1‑150 (MQ=255) ttCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCAtt > 2:551324/1‑150 (MQ=255) tCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTc < 1:3445704/150‑1 (MQ=255) cATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTcc > 1:4403431/1‑150 (MQ=255) aTCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTccc < 2:3087177/150‑1 (MQ=255) cTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGatt > 2:2822498/1‑150 (MQ=255) cTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGatt < 2:4403627/150‑1 (MQ=255) tGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGctta > 2:125387/1‑150 (MQ=255) ccAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGattatt < 2:864127/150‑1 (MQ=255) aGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTaa > 1:4685001/1‑150 (MQ=255) aGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTaa < 2:4489527/150‑1 (MQ=255) tGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCa < 1:1209708/150‑1 (MQ=255) tttGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTc < 2:486250/150‑1 (MQ=255) tGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCAc > 1:1404431/1‑150 (MQ=255) cgcCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCa < 1:4447021/150‑1 (MQ=255) ccAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATc < 2:453072/150‑1 (MQ=255) ccAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATc > 1:3781442/1‑150 (MQ=255) cAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCg > 1:2880960/1‑150 (MQ=255) cAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCg > 2:737099/1‑150 (MQ=255) aGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCgg > 1:1877991/1‑150 (MQ=255) aGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCgg > 1:1286542/1‑150 (MQ=255) aGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCgg < 2:3403952/150‑1 (MQ=255) tgtAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCa < 2:1347157/150‑1 (MQ=255) tAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGt > 2:1183990/1‑150 (MQ=255) tAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGt > 1:4622039/1‑150 (MQ=255) tAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCACGGATTATTAACACATTCACAATCGGCAGt > 2:3125045/1‑150 (MQ=255) aaTCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTaa < 1:1636581/150‑1 (MQ=255) aaTCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTaa > 1:739034/1‑150 (MQ=255) aaTCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTaa > 1:804449/1‑150 (MQ=255) aTCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAg < 1:3469022/150‑1 (MQ=255) tCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCgag < 1:2655817/150‑1 (MQ=255) acaTTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCgagaca > 2:464325/1‑148 (MQ=255) caTTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAAc > 2:4281109/1‑150 (MQ=255) aTTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAAcc > 1:397592/1‑150 (MQ=255) aTTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAAcc > 1:1407214/1‑150 (MQ=255) aaTGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTa < 2:3558408/150‑1 (MQ=255) aTGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTat < 2:2156051/150‑1 (MQ=255) acgacTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTatcaa > 1:3152351/1‑150 (MQ=255) acgacTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTatcaa > 1:3152204/1‑150 (MQ=255) acTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTatcaatca < 2:4696190/150‑1 (MQ=255) cTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAg < 2:2270286/150‑1 (MQ=255) cTGGCGTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAg > 1:3408896/1‑150 (MQ=255) ggCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTc < 1:1812011/150‑1 (MQ=255) gTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCAt > 1:206856/1‑150 (MQ=255) gTATGGGCGTAGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCAt < 1:2959274/150‑1 (MQ=255) gggCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGt < 2:2617383/150‑1 (MQ=255) gggCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGt < 1:3035620/150‑1 (MQ=255) ggCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGTc < 2:3954210/150‑1 (MQ=255) gtcgtGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGTCAGc > 2:2968173/1‑150 (MQ=255) cgtGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGTCAGCGt > 1:2887234/1‑150 (MQ=255) | CCGGCATGTCCGGTATTGATTTCGGTAATTTCGCCTTTACCCAGTTGAGTATGAATGATGCCATTCAACGTCGCTTCATCTGGCTGCCAGGGTGCTTTGCGCCAGTGTAAATCGTAATCCACATTAAATGACGACTGGCGTATGGGCGTCGTGACACCAAAAAATTCTGCGGCGGCATCAATTTTCTGCCCGCGCAGTTTTCCTTTCAGCGAGGTACGTTCATTCCCCGGATTATTAACCCATTCACCATCGGCAGTAAGCCGCGAGAAACCAGTATCAATCAGTCCATTGGTCAGCGT > CP009273/3386250‑3386548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |