| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,453,663 | C→A | 24.9% | S163* (TCA→TAA) | gspF → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,453,663 | 0 | C | A | 24.9% | 788.3 / 236.1 | 332 | S163* (TCA→TAA) | gspF | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base C (128/121); new base A (38/45); total (166/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 334 total aligned reads displayed.
TGCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGCGAC > CP009273/3453514‑3453811 | tGCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTc < 2:2552380/150‑1 (MQ=255) gCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCa > 2:493528/1‑150 (MQ=255) cATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCAc < 2:1694296/150‑1 (MQ=255) aTTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACt < 1:128751/150‑1 (MQ=255) aTTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACt < 1:527265/150‑1 (MQ=255) aTTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACt > 1:547288/1‑150 (MQ=255) aGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCt > 1:4020220/1‑150 (MQ=255) gCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTa > 2:4025588/1‑150 (MQ=255) ttCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCt > 1:4640737/1‑150 (MQ=255) ttCCAACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCt < 1:3688311/150‑1 (MQ=255) tCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTg > 1:1805563/1‑150 (MQ=255) cccACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGt < 1:1490316/150‑1 (MQ=255) cccACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGt < 2:1615670/150‑1 (MQ=255) cccACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGt < 1:2623959/150‑1 (MQ=255) cccACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGt < 1:1344327/150‑1 (MQ=255) cACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTAt > 2:2252745/1‑150 (MQ=255) cGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGc > 1:438838/1‑150 (MQ=255) gCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCt < 1:838468/150‑1 (MQ=255) cTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTc > 1:3891537/1‑150 (MQ=255) cTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTc < 1:3107255/150‑1 (MQ=255) ttttCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCa > 2:2713084/1‑150 (MQ=255) gATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACg > 1:96580/1‑150 (MQ=255) gATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACg > 2:4654331/1‑150 (MQ=255) gATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACg > 1:2494779/1‑150 (MQ=255) gATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACg > 2:4157544/1‑150 (MQ=255) gATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACg > 2:1766962/1‑150 (MQ=255) aTTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACgg < 1:1138935/150‑1 (MQ=255) aTTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACgg > 1:2684257/1‑150 (MQ=255) ttCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGt > 1:1987041/1‑150 (MQ=255) tCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTg < 2:3537608/150‑1 (MQ=255) tCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTg < 1:2378459/150‑1 (MQ=255) tCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTg < 1:196526/150‑1 (MQ=255) cGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTgg < 1:62202/150‑1 (MQ=255) cGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTgg > 2:2743979/1‑150 (MQ=255) gCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGc > 2:4781780/1‑150 (MQ=255) ctctATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCg > 2:1886791/1‑150 (MQ=255) tACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGt > 2:4492601/1‑150 (MQ=255) cccTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCg < 2:1009927/150‑1 (MQ=255) cTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTg < 1:3260462/150‑1 (MQ=255) tAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGatta > 2:2870719/1‑150 (MQ=255) tAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGatta > 2:3355794/1‑150 (MQ=255) aaaaGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGattat > 2:4568110/1‑150 (MQ=255) aaGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATtc < 2:1567449/150‑1 (MQ=255) aGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATtct > 2:3624338/1‑150 (MQ=255) cGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTctcc > 2:2208653/1‑150 (MQ=255) gggCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTctcct < 1:264464/150‑1 (MQ=255) gAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCAct > 2:562997/1‑150 (MQ=255) aaaaGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCActg > 2:59955/1‑150 (MQ=255) aaGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCActgct < 1:41843/150‑1 (MQ=255) aaGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCActgct > 1:3310249/1‑150 (MQ=255) agCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTc < 1:1378300/150‑1 (MQ=255) ggCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGc > 2:3972717/1‑150 (MQ=255) tgctgGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCa > 2:78124/1‑150 (MQ=255) gctgGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCaa < 1:1852200/150‑1 (MQ=255) ctgGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTAGTGCCCaaa > 1:1740407/1‑150 (MQ=255) ggTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGa < 2:914220/150‑1 (MQ=255) gtTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACa < 2:1042989/150‑1 (MQ=255) gtTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACa > 2:3899346/1‑150 (MQ=255) gtTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACa > 2:23623/1‑150 (MQ=255) ggAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGtt < 2:1427340/150‑1 (MQ=255) ggAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGtt > 2:1226297/1‑150 (MQ=255) aaaGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGt > 2:639662/1‑150 (MQ=255) ggctgATTACAATGAAAGCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCatat < 2:4503234/150‑1 (MQ=255) ctgATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGa > 2:2946373/1‑150 (MQ=255) gATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAag < 1:2945675/150‑1 (MQ=255) aCAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAagcagc > 2:3735996/1‑150 (MQ=255) aCAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCCTATGAagcagc > 1:3499624/1‑150 (MQ=255) tGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACt < 1:1037443/150‑1 (MQ=255) gAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTg < 2:3101593/150‑1 (MQ=255) aaaaCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGc > 2:2558064/1‑150 (MQ=255) aaaaCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGc < 1:2421099/150‑1 (MQ=255) aaaaCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGc < 2:2065530/150‑1 (MQ=255) aaaaCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGc > 1:4802281/1‑150 (MQ=255) aaCCGGCAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCg < 1:1167549/150‑1 (MQ=255) ccGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCt < 1:4322603/150‑1 (MQ=255) cGGCAGAAACTCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTg < 2:3031505/150‑1 (MQ=255) cAGAAAATCCGCAGCAAGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGt > 2:3883735/1‑150 (MQ=255) aaaTCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTACTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTacac > 1:797073/1‑150 (MQ=255) agcaAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCtt < 2:2160772/150‑1 (MQ=255) agcaAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACAGCCGCTGAGTACACGCATTCtt > 1:2714488/1‑150 (MQ=255) caAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCtttt > 2:97146/1‑150 (MQ=255) aaGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTa < 2:4095503/150‑1 (MQ=255) aaGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTa < 1:2743979/150‑1 (MQ=255) aaGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTa < 2:4347469/150‑1 (MQ=255) aaGCTCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTa < 1:3245323/150‑1 (MQ=255) gCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAgg < 2:2638599/150‑1 (MQ=255) gCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAgg < 1:4624432/150‑1 (MQ=255) cTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGt < 1:1482158/150‑1 (MQ=255) cTCATTCAGTCACTGATCTACCCCTGTATGCTCAATACGGTGGCGATTGGGGTCGTGATTATTAACCTCAATGCTGTAGTTCCCAAAATTACAGAACAGTTAGTGCATATGAATCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGt > 2:428386/1‑150 (MQ=255) tCATTCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTc > 2:1369970/1‑150 (MQ=255) cATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCt < 1:4045645/150‑1 (MQ=255) cATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCt < 1:213816/150‑1 (MQ=255) ttCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTgt > 2:1393150/1‑149 (MQ=255) ttCAGTAACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGa < 1:3377775/150‑1 (MQ=255) tCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAg < 1:1627950/150‑1 (MQ=255) tCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCACACTGCTGTAGTGCCCAAAATTAACGAACAGTTCGTGCAAATGAAACAGCAACAGCCGCAGAGTAAACGCATTATTTTAGGTCTGAg > 1:3018010/1‑150 (MQ=255) cAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGc < 2:1189737/150‑1 (MQ=255) gTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGCGa < 2:4639959/150‑1 (MQ=255) tCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCAGTCTTTTATGTCTGAGCGac > 2:827835/1‑150 (MQ=255) tCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAAATACCGAACAGTTCGTGCATATGAAGCAGCAACAGCCGCTGAGTACACGCAATCTTTTAGGTCTGAGCGac > 1:2532860/1‑150 (MQ=255) | TGCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGCGAC > CP009273/3453514‑3453811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |