| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,473,885 | C→A | 21.1% | G28C (GGT→TGT) | kefB ← | potassium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,473,885 | 0 | C | A | 21.1% | 1074.3 / 215.7 | 397 | G28C (GGT→TGT) | kefB | potassium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base C (166/146); new base A (58/27); total (224/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.38e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 406 total aligned reads displayed.
GGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTCGCCAGCTC > CP009273/3473736‑3474034 | gggATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATAcc > 1:2632077/1‑150 (MQ=255) gATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATAcaca < 1:3785266/150‑1 (MQ=255) gATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCa < 2:328534/150‑1 (MQ=255) ttCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGc > 2:942486/1‑150 (MQ=255) tCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAGCCCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGc < 2:620319/150‑1 (MQ=255) cAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATACACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCcg < 1:3283735/150‑1 (MQ=255) cAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCcg < 2:2435530/150‑1 (MQ=255) aGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGcc < 2:3013156/150‑1 (MQ=255) ggCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCGTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCa < 1:2990777/150‑1 (MQ=255) ggCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCa < 2:3645825/150‑1 (MQ=255) ggCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCa < 2:4826038/150‑1 (MQ=255) ccGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGc > 2:309445/1‑150 (MQ=255) cGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCg > 2:1394653/1‑150 (MQ=255) tgatAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCa < 2:4303380/150‑1 (MQ=255) tgatAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCa < 2:3055935/150‑1 (MQ=255) atAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCAcc > 1:535597/1‑150 (MQ=255) atAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCAcc > 2:682189/1‑150 (MQ=255) aaaCATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGc > 1:3985860/1‑150 (MQ=255) aaCATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCa < 1:1356510/150‑1 (MQ=255) cATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGc > 2:3438017/1‑150 (MQ=255) tCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCCACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCa < 1:2897406/150‑1 (MQ=255) tCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCa < 2:4718790/150‑1 (MQ=255) cAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCAc > 1:3441377/1‑150 (MQ=255) aGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCAcc > 2:783082/1‑150 (MQ=255) ggAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACCGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCAccg < 1:3717712/150‑1 (MQ=255) tACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACcgccgc < 1:4862548/150‑1 (MQ=255) cACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGaa < 1:1495521/150‑1 (MQ=255) gCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAagag > 1:2837038/1‑150 (MQ=255) ccGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTACTAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACACCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAgaga < 1:1346140/150‑1 (MQ=255) ccGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCCATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAgaga < 1:4136965/150‑1 (MQ=255) cGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGaa < 1:2182493/150‑1 (MQ=255) gAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGaaa > 1:3264192/1‑150 (MQ=255) gAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGaaa < 2:3182960/150‑1 (MQ=255) aGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAAc > 2:2055394/1‑150 (MQ=255) aGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAAc > 1:760052/1‑150 (MQ=255) aGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAAGCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAAc < 2:3476579/150‑1 (MQ=255) gTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACa < 1:4543786/150‑1 (MQ=255) gTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACa < 1:3809606/150‑1 (MQ=255) gTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACa > 1:1981121/1‑150 (MQ=255) gAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACt < 2:4221463/150‑1 (MQ=255) gAAAAGTGGAGGATCTCATCGACGTCGATAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACt < 1:917161/150‑1 (MQ=255) aGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTg < 1:2495830/150‑1 (MQ=255) ggacgaTCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGa > 2:3934218/1‑150 (MQ=255) gaggaTCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAg > 2:1463452/1‑150 (MQ=255) aTCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTaaa > 2:2237849/1‑150 (MQ=255) tctcATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTaaaa < 1:4033624/150‑1 (MQ=255) ctcATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCGGCCAGCACATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTaaaaa < 2:4592068/150‑1 (MQ=255) cATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAAt > 2:4409892/1‑150 (MQ=255) cATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAAt > 2:4479752/1‑150 (MQ=255) aTCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATc < 1:2404209/150‑1 (MQ=255) aTCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATc > 1:720916/1‑150 (MQ=255) tCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCg < 2:1276861/150‑1 (MQ=255) cGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAAc > 1:4609391/1‑150 (MQ=255) gTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAAGACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAAcc < 2:3547640/150‑1 (MQ=255) cGCTAATCAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATCCCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCtt < 1:1012960/150‑1 (MQ=255) cTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTcc > 2:2737190/1‑150 (MQ=255) taaACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCa < 1:4776293/150‑1 (MQ=255) aaaCCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAg > 1:2043037/1‑150 (MQ=255) aaCCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGc > 2:1227014/1‑150 (MQ=255) ccccAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCgg > 2:2345050/1‑150 (MQ=255) cAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGcct < 1:2219593/150‑1 (MQ=255) aG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGcctc > 2:1634697/1‑150 (MQ=255) g‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGcctcc < 1:2287197/150‑1 (MQ=255) cccccACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGcctcct < 1:2442654/150‑1 (MQ=255) cACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCCGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGgag < 1:3515941/150‑1 (MQ=255) cACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGgag < 1:1060726/150‑1 (MQ=255) cACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGgag > 1:689865/1‑150 (MQ=255) cGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGAc > 1:1221218/1‑150 (MQ=255) cGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGAc > 1:4383376/1‑150 (MQ=255) gggCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACa > 1:468031/1‑150 (MQ=255) gCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGc > 2:3877868/1‑150 (MQ=255) cAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGACCCTTCCATCAGCGGCCTCCTGGAGACAGCgg > 2:494286/1‑150 (MQ=255) aaTTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGa > 2:255163/1‑150 (MQ=255) aTTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGAt < 1:3116332/150‑1 (MQ=255) aTTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGAt > 1:1130574/1‑150 (MQ=255) tGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGAttt > 2:2658535/1‑150 (MQ=255) tGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGAttt < 2:2204969/150‑1 (MQ=255) aaTCCCTGCCAGCAAATATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTgcc > 2:1941756/1‑150 (MQ=255) aTCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTgcca > 1:1653064/1‑150 (MQ=255) tCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTgccag > 1:3343454/1‑150 (MQ=255) cTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTgccagcca > 2:906950/1‑150 (MQ=255) tGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGccagccag > 2:1123426/1‑150 (MQ=255) tGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGccagccag > 1:172896/1‑150 (MQ=255) gCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCAcc > 2:1737281/1‑150 (MQ=255) aaTATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACGGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTa > 1:190194/1‑150 (MQ=255) aaTATCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTa > 1:273369/1‑150 (MQ=255) atatCCCAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAg < 1:3599391/150‑1 (MQ=255) tatCCCAACACAGCGCCAAGACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAgg < 1:4304145/150‑1 (MQ=255) cAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTg > 1:807672/1‑150 (MQ=255) cAACACAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTg > 2:2160490/1‑150 (MQ=255) acacAGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGc < 2:4023487/150‑1 (MQ=255) cacaGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCg < 2:3220279/150‑1 (MQ=255) aGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTgg > 1:3088605/1‑150 (MQ=255) aGCGCCAATACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTgg > 1:3241068/1‑150 (MQ=255) cgcCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCt < 1:319002/150‑1 (MQ=255) gcCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTc > 2:2916297/1‑150 (MQ=255) gcCAAGACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTc < 2:488518/150‑1 (MQ=255) aTACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTCGCCa < 2:4238808/150‑1 (MQ=255) aTACACAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTCGCCa < 1:951962/150‑1 (MQ=255) ccAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTCGCCAGCTc < 2:3763402/150‑1 (MQ=255) | GGGATTCAACTCAAGGCCGATGATAAACATCAGGAATACCACGCCGAGTTCCGAAAAGTGGAGGATCTCATCGACGTCGCTAATAAACCCCAG‑CCCCCACGGGCCAATTGCAATCCCTGCCAGCAAATATCCCAACACAGCGCCAATACCCAGCCGCGATGCCAGCGGCACCGCAGCCACCGCCGCGAAGAGAAACAGCACTCCTGCGAGTAAAAAATCGGAACCTTCCATCAGCGGCCTCCTGGAGACAGCGGATTTGCCAGCCAGTCACCGTAGGCTCTGGCGTGGCTCGCCAGCTC > CP009273/3473736‑3474034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |