| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,545,150 | G→C | 6.1% | P228R (CCG→CGG) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,545,150 | 0 | G | C | 6.1% | 993.1 / 10.6 | 303 | P228R (CCG→CGG) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base G (154/125); new base C (20/3); total (175/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CACACTGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTG > CP009273/3545001‑3545298 | acacTGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACgg < 1:2389336/150‑1 (MQ=255) cacTGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGa < 2:6300/150‑1 (MQ=255) acTGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGAt > 2:381489/1‑150 (MQ=255) tGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATgc < 1:4068546/150‑1 (MQ=255) gTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTCAGATCAAACGGATGCgcgtg > 1:723274/1‑150 (MQ=255) tgctgcATCAGGCGCAGCTTTTTCCCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTc < 1:1300222/150‑1 (MQ=255) tgctgcATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTGTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCGGCTGTTCGGCACGCAAGAAATCACCGTCGGACAATTTAATCAACTCAAACCGATGCCCGTGCGTc > 1:2492431/1‑150 (MQ=255) tgcATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTACGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTAACATCAAAAGGATTCGCGAGCGTCGcc > 2:3682930/1‑150 (MQ=255) cAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTATTCAGATAAAAAAGATTCGCGTGCGTCGCCGGCca > 1:2102292/1‑150 (MQ=255) aGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCcac < 2:2352050/150‑1 (MQ=255) cgcAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTCAGATCAAAAGGATGCGCGTGCGTCGCCAGCCACAGa > 1:4439472/1‑150 (MQ=255) gcAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTATTAAGATAAAAACGAATCGCGAGCGTCCCCAGCCACAGAc > 1:3908007/1‑150 (MQ=255) aGCTTTTTACCGGCAGTATGTTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTGAAATTTATTAAGATCAAAACGATTCGCGTGCGTCGCCAGCCACCGACGc > 1:1636153/1‑150 (MQ=255) gCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTCAGATCAAAAGGATTCGCGTGCGTCGCCAGCCACACACGCa > 1:3972800/1‑150 (MQ=255) gCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCa < 2:3798285/150‑1 (MQ=255) gCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCa < 1:1386793/150‑1 (MQ=255) ttACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTTGTAAGATAAAAACGAAGAGCGGGCGGCGCCTGCCCCACACGCCCCGGc > 1:2920695/1‑150 (MQ=255) tACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCt < 1:4406902/150‑1 (MQ=255) aGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATTCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGcgccac > 2:2690804/1‑150 (MQ=255) aGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACCGATGCGCGTGCGTCGCCAGCCCCACACGCACCGGCTGccccac > 2:3739490/1‑150 (MQ=255) tATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTATTCACATCAAACGGATTCCCGGGCGTCGCCGGCCACACACCCACCGGCTGcgccacgc > 1:1464799/1‑150 (MQ=255) aTGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATAAAACCGATGCGCGTGCGTCGCCAGCCCCAGACGCAGCGGCAGcgccccccc > 2:2947487/1‑145 (MQ=255) tGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGcgccacgcca < 2:3066475/150‑1 (MQ=255) tGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTATTAACATAAAACGGATTCGCGTGCGTCGCCAGCCACACACGCACCGGCATcgccccccca > 2:1611935/1‑150 (MQ=255) ggTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACCGACGCAGCGGCTGcgccacgccct > 2:223669/1‑148 (MQ=255) ggTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGAATCCCGTTCGTAGCCTGCCACAGACGCAGCGGCTGCGCCACGCCAt > 2:2654769/1‑150 (MQ=255) gTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTATTAAGATAAAAACGATTCGCGTGCGTCGCCAGCCACAGAAGCAGCGGCTTcgccaacccaat > 2:3380835/1‑143 (MQ=255) gTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCAATGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAAATTAGTAAAATAAAACGGATTCGCCTGCCTCCCCATCCACACAACCAGCCGCTGcgccacgcccat > 2:3778009/1‑147 (MQ=255) ttGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTa < 1:3264292/150‑1 (MQ=255) tGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTAAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTAc > 2:1911949/1‑150 (MQ=255) gTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACg < 2:543940/150‑1 (MQ=255) cGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGAt < 1:2799076/150‑1 (MQ=255) cGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGAt < 1:3079102/150‑1 (MQ=255) tttGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAg < 1:436239/150‑1 (MQ=255) gATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGa < 1:381489/150‑1 (MQ=255) aTAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGAc < 2:3959194/150‑1 (MQ=255) aTAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGAc < 2:2694301/150‑1 (MQ=255) aTAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGAAGCGCGTGCGTCGCCAGCCCCAGACCCAGCGGCTGCGCCACGCCATTACGATAGCCGAc > 2:2172426/1‑150 (MQ=255) gagaACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCAGCGCCACGCCATTACGATAGCCGACAAc > 2:4586165/1‑150 (MQ=255) aaCTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACggg < 1:1921388/150‑1 (MQ=255) aaCTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACggg < 1:3981351/150‑1 (MQ=255) aaCTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTGAAATTTAGTCAGATCAAAAGGATGCGCGTGCGTCGCCTGCCACAGCCGCAGCGGCGGCGCCCCGCCATTAAGATAGCCGACCACcgg > 2:3298147/1‑150 (MQ=255) cTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTAAGATCAAAAGGATTCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCAATAAGATAGCCCACAACCGGga > 1:4177038/1‑150 (MQ=255) tGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTTGTCAGATCAAACGGATGCGCGTGCGTCGCCAGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGACGACAACCGGGAGAt > 1:4603977/1‑150 (MQ=255) tGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCCCAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACCGGGAGAt > 1:4811588/1‑150 (MQ=255) tGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGAt < 1:2174691/150‑1 (MQ=255) tGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTGAAATTTAGTCAGATCAAAAGGATGCGCGTGCGTCGCCTGCCACAGAAGCCGCGGCGGCGCCACCCCAATAAGATAGCCGACAACCGGGAGAt > 1:4548455/1‑150 (MQ=255) gTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTAAGATCAAACGGATGCGCGTGCGTCGCCTGCCACCGACGCAGCGGCGGCGCCACCCCCATAAGAAAGCCCACAACCGGGAGATcc > 1:3001180/1‑150 (MQ=255) gTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATcc < 2:1219967/150‑1 (MQ=255) gTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTATTCAGATCAAAAGGATTCGCGTGCGTCGCCTGCCACAGAAGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACCGGGAGATCCCACg > 1:1121197/1‑150 (MQ=255) gTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACg < 2:4283022/150‑1 (MQ=255) gTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACg < 1:1520572/150‑1 (MQ=255) gTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAAACGATGCGCGTGCGGCGCCTGCCACAGACGCAGCGGCTGCGCCACCCCAATACGATAGCCGACAACCGGGAGCTCCCCCg > 2:3668857/1‑150 (MQ=255) ttttCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCt < 1:4777693/150‑1 (MQ=255) tgtCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCtt < 2:2054607/148‑1 (MQ=255) cGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGAcc > 2:3624734/1‑150 (MQ=255) cGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGAcc < 1:3550605/150‑1 (MQ=255) gCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGAAGCAGCGGCTGCGCCACGCCAATACGATAGCCGACAACGGGGAGATCCCACGCTTGACCg > 1:345131/1‑150 (MQ=255) gCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTGAAATTTAGTCAGATAAAACGGATTCGCGGGCGTCGCCAGCCACAGACGCAGCGGCGGCGCCACCCCAATAAGATAGCCCACAACCGGGCGATCCCACCCGTGAccc > 1:2600968/1‑149 (MQ=255) cATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTAAGATAAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCgg > 1:4740732/1‑150 (MQ=255) ttGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTa < 2:1355405/150‑1 (MQ=255) ttGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTa < 1:433663/150‑1 (MQ=255) tGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACCGATGCGCGTGCGTCGCCTGCCCCAGACCCCGCGGCGGCGCCACCCCCTTACCATAGCCCACAACGGGGAGATCCCCCCCATGACCGGTAAAgg > 1:1533328/1‑150 (MQ=255) cccTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTa < 2:4232724/150‑1 (MQ=255) ccTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTaa > 2:1147263/1‑150 (MQ=255) ccTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACCGATGCGCGTGCGGCGCCTGCCACAGACGCAGCCGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGCTCCCACGCTTGACCGGTAATGGTaa > 2:192618/1‑150 (MQ=255) tgctgTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAAc < 1:422079/150‑1 (MQ=255) tgTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCCCGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTcc > 2:4147437/1‑150 (MQ=255) tgTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGGGCGTCGCCTGCCACAGACGCAGCGGCGGCGCCCCGCCAGTACGATAGCCGACAACGGGGAGATCCCCCGCGTGACCGGTAATGGTAAACAcc > 2:1673591/1‑150 (MQ=255) gTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCACACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCg < 2:2910886/150‑1 (MQ=255) cGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCCGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATATCCGACAACGGGGTGATCCCACGCTTTACCCGTAAAGGTAAAATCCCGca > 2:111945/1‑149 (MQ=255) cGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGTCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCt < 1:999160/150‑1 (MQ=255) ggCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTc < 2:1028458/150‑1 (MQ=255) aGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACCGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGcgtc > 2:3160130/1‑150 (MQ=255) aGAAATCACCGTCGTTAAATTTAGTCAGATAAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCAATACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGcgtc > 2:4746300/1‑150 (MQ=255) gAAATCACCGTCGTTAAATTTAGTCAGATAAAAAGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCCACAACGGGGAGATACCACGCTTGACCGGTAAAGGTAAACACCCGCTCCCACcgtcc > 2:4636494/1‑150 (MQ=255) aTCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGcgtccgtc < 2:750657/150‑1 (MQ=255) cACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCtt < 1:3338942/150‑1 (MQ=255) ccGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTc < 2:1446592/150‑1 (MQ=255) ccGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTc < 1:534409/150‑1 (MQ=255) cgtcgtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCg > 2:129827/1‑150 (MQ=255) gtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCAc > 1:2259511/1‑150 (MQ=255) aaaTTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACttt > 1:2384135/1‑150 (MQ=255) aaTTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTa > 2:2309533/1‑150 (MQ=255) aTTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAc > 2:4433203/1‑150 (MQ=255) tttAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAcc < 1:616083/150‑1 (MQ=255) tAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGc > 2:3019747/1‑150 (MQ=255) cAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAAt > 1:3726252/1‑150 (MQ=255) cAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAAt > 2:1769822/1‑150 (MQ=255) aGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATc > 1:822221/1‑150 (MQ=255) gATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATcc > 2:1694452/1‑150 (MQ=255) gATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATcc < 2:2600968/150‑1 (MQ=255) gATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATcc < 2:4836581/150‑1 (MQ=255) tCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCt > 1:2657445/1‑150 (MQ=255) cAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTa < 1:792825/150‑1 (MQ=255) aaaCGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAc > 1:3193289/1‑150 (MQ=255) aaaCGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAc > 2:521070/1‑150 (MQ=255) aaaCGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAc < 2:1558435/150‑1 (MQ=255) aaCCGATGCGCGTGCGTCGCCTGCCAGAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACTCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAcc < 2:2770352/150‑1 (MQ=255) aaCCGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTAcc < 2:2452084/150‑1 (MQ=255) | CACACTGGAAGTATTGCTGCATCAGGCGCAGCTTTTTACCGGCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCCAATCCCTACCTG > CP009273/3545001‑3545298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |