| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,642,278 | T→C | 13.0% | intergenic (+37/‑17) | arsR → / → arsB | arsenical resistance operon transcriptional repressor; autorepressor/arsenite/antimonite transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,642,278 | 0 | T | C | 13.0% | 687.7 / 80.0 | 241 | intergenic (+37/‑17) | arsR/arsB | arsenical resistance operon transcriptional repressor; autorepressor/arsenite/antimonite transporter |
| Reads supporting (aligned to +/- strand): ref base T (112/97); new base C (20/11); total (133/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
Only 100 of 251 total aligned reads displayed.
CGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTG > CP009273/3642129‑3642427 | ggcgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGttt < 2:803447/150‑1 (MQ=255) cgAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTa < 1:3464709/150‑1 (MQ=255) aaaaTTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATc < 2:2076502/150‑1 (MQ=255) ttattGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCggg < 1:1261158/150‑1 (MQ=255) attGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAg > 2:2357324/1‑150 (MQ=255) gatgaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCa < 2:3254832/150‑1 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa < 1:4035785/150‑1 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa < 2:1552417/150‑1 (MQ=255) gaGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTa > 2:4112032/1‑150 (MQ=255) aGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTAt < 1:1613730/150‑1 (MQ=255) aGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTAt > 2:4553388/1‑150 (MQ=255) aGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTAt > 2:2674475/1‑150 (MQ=255) ggCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATg > 2:2631959/1‑150 (MQ=255) cGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTgg > 1:1987412/1‑150 (MQ=255) aTGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCa < 2:3164195/150‑1 (MQ=255) aTGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCa < 2:4465553/150‑1 (MQ=255) tgtgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAg < 2:733045/150‑1 (MQ=255) gtgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAgg > 1:2580510/1‑150 (MQ=255) gtgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAgg > 1:4699570/1‑150 (MQ=255) gtgAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAgg > 1:127419/1‑150 (MQ=255) aaaaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCtt > 1:3563506/1‑150 (MQ=255) aaaaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCtt < 1:2788954/150‑1 (MQ=255) aaaGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCttt > 1:3341782/1‑150 (MQ=255) ttCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCt < 1:4105512/150‑1 (MQ=255) tCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTg < 2:2530446/150‑1 (MQ=255) cAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCTTGa < 1:93945/150‑1 (MQ=255) aGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAc < 2:188787/150‑1 (MQ=255) aGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAc > 2:3368235/1‑150 (MQ=255) aGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAc > 1:3547481/1‑150 (MQ=255) aGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGAc > 2:2800610/1‑150 (MQ=255) gCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCa < 1:845621/150‑1 (MQ=255) gCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCa < 1:3772967/150‑1 (MQ=255) gATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATc > 2:1763887/1‑150 (MQ=255) gTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAt < 2:4087049/150‑1 (MQ=255) ccTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATc < 1:548227/150‑1 (MQ=255) ccTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATc < 1:2256615/150‑1 (MQ=255) ggCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTCTTGGTTATCTgg > 1:573848/1‑150 (MQ=255) cTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCa < 2:4314130/150‑1 (MQ=255) aCAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCg < 2:4376014/150‑1 (MQ=255) aaaCTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACCTATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGaaa < 1:196274/150‑1 (MQ=255) aCTGTTCCGGGGACAGTAAGAACATTTGGAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAgg > 1:1350902/1‑150 (MQ=255) aCTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAgg > 1:1351200/1‑150 (MQ=255) tGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGtt < 1:2985005/150‑1 (MQ=255) ggTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGCATTGTCAGAGGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGtt < 2:1110341/149‑1 (MQ=255) gTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGttt < 2:1060889/150‑1 (MQ=255) gTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGttt < 2:299601/150‑1 (MQ=255) ttCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTa < 2:2960921/150‑1 (MQ=255) ccGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAgg > 1:430563/1‑150 (MQ=255) ccGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAgg < 1:389955/150‑1 (MQ=255) cGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGc < 2:4202454/150‑1 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa > 2:1748901/1‑150 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa < 2:3579338/150‑1 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa > 2:3623773/1‑150 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa > 2:3808057/1‑150 (MQ=255) ggggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCa > 1:3780453/1‑150 (MQ=255) ggACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATc < 1:1898939/150‑1 (MQ=255) cAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGc > 2:493329/1‑150 (MQ=255) gTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTg > 1:1045886/1‑150 (MQ=255) aGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAg > 2:2264226/1‑150 (MQ=255) aGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAg > 2:36835/1‑150 (MQ=255) aGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAg > 2:2466274/1‑150 (MQ=255) cATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCa > 1:2565465/1‑150 (MQ=255) aTTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAGTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCaa > 2:379325/1‑150 (MQ=255) tttGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAAc < 1:669620/150‑1 (MQ=255) gTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTAGTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTctg > 1:3743679/1‑148 (MQ=255) ttAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGgc > 2:2137944/1‑150 (MQ=255) aaaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAg > 2:1842853/1‑150 (MQ=255) aaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGt > 2:4715877/1‑150 (MQ=255) aaTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTAACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGt > 2:3529182/1‑150 (MQ=255) aTTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTa < 1:4416715/150‑1 (MQ=255) aTTTAGCTAAACACATATGAAGTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTa < 1:1623872/150‑1 (MQ=255) tAGCTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTg > 1:3175515/1‑150 (MQ=255) aGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTgg > 1:32677/1‑150 (MQ=255) gCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGc > 2:4172002/1‑150 (MQ=255) cTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGTAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCg > 2:1426806/1‑150 (MQ=255) cTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCg < 2:2215506/150‑1 (MQ=255) cTAAACACATATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCg > 2:4702523/1‑150 (MQ=255) cTAAACACAGATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCg < 1:3368235/150‑1 (MQ=255) tAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgt > 1:198939/1‑150 (MQ=255) aaCACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgtta > 1:1195146/1‑150 (MQ=255) aaCACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgtta > 2:1330151/1‑150 (MQ=255) aaCACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgtta > 1:3239645/1‑150 (MQ=255) acacATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttag < 1:2354197/150‑1 (MQ=255) cacaTATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagt > 1:544789/1‑150 (MQ=255) cacaTATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagt < 1:2757475/150‑1 (MQ=255) acaTATGAATTTTCAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCgttagtt > 1:1014562/1‑150 (MQ=255) tatGAATTTTCAGATGTGTTTTATCCGGGAGGCAATATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACAGGCGTTAGTTACg > 2:563057/1‑150 (MQ=255) gAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGc < 1:120348/150‑1 (MQ=255) aaTTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCg > 2:1011680/1‑150 (MQ=255) aaTTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCg > 2:287762/1‑150 (MQ=255) tttCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTgg > 2:4827809/1‑150 (MQ=255) ttCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGt > 1:3455373/1‑150 (MQ=255) tacAGATGTGTATAATCCGGGAGGCATTATGTAACTGGCAGGCGCTAACTATGTCCTGACCATCGTATTGGTTATCAGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCACGGCGCAGTACTGGCGTTAGTTACGGGCGTGGt > 2:1370815/3‑150 (MQ=255) cAGATGTGTCTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTcc < 1:4833718/150‑1 (MQ=255) aGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCa > 2:2537963/1‑150 (MQ=255) aTGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATc > 2:307472/1‑150 (MQ=255) aTGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATc > 1:208271/1‑150 (MQ=255) aTGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATc < 1:4624421/150‑1 (MQ=255) tgtTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCgg > 1:2145018/1‑150 (MQ=255) ttttATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGt > 1:811085/1‑150 (MQ=255) | CGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAAAAATTTAGCTAAACACATATGAATTTTCAGATGTGTTTTATCCGGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTG > CP009273/3642129‑3642427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |