| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,676,141 | T→C | 20.6% | I223V (ATT→GTT) | dctA ← | C4‑dicarboxylic acid, orotate and citrate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,676,141 | 0 | T | C | 20.6% | 690.3 / 175.1 | 320 | I223V (ATT→GTT) | dctA | C4‑dicarboxylic acid, orotate and citrate transporter |
| Reads supporting (aligned to +/- strand): ref base T (128/120); new base C (23/40); total (160/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.04e-01 | |||||||||||
Only 100 of 322 total aligned reads displayed.
CCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTAAAAA > CP009273/3675994‑3676287 | cGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAg > 1:4447727/1‑150 (MQ=255) cGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAAAACCAGCACCACAAAAAGGATAAAGGTAATGTAGAAAAAGATAAtaaa > 1:3488244/1‑147 (MQ=255) cGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTAGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAg < 1:516521/150‑1 (MQ=255) cGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTAGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAg < 1:2949315/150‑1 (MQ=255) cTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCGTTAGCGATTGAACCCAATACCACCACCACAAACAGGAAACACGTAATGTAGAAAAAGATAATCAGCTg > 1:4159180/1‑150 (MQ=255) tCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGc > 2:2233296/1‑150 (MQ=255) cGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAAAAGGATACAGGTAAATTATAAAAAGATAATAAGCTGcc > 1:4271039/1‑150 (MQ=255) cGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGcc > 1:800879/1‑150 (MQ=255) ggAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTATCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGccc > 1:2386015/1‑150 (MQ=255) aGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCGGCCCCAg > 2:2092327/1‑150 (MQ=255) aTGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGtt < 1:1445411/150‑1 (MQ=255) gAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGc < 2:2199737/150‑1 (MQ=255) aaGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCa < 1:1452310/150‑1 (MQ=255) gTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCAcc < 2:1881631/150‑1 (MQ=255) tCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTTCACCa > 2:2004702/1‑150 (MQ=255) tCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAATGTAGAAAAAGATAATAAGCTGCCCCAGTTGCACCa > 1:4027490/1‑150 (MQ=255) cccAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTATCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAAAGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAgt > 1:2983121/1‑150 (MQ=255) cccAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAgt < 1:2703846/150‑1 (MQ=255) ccAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAgtg < 1:2679713/150‑1 (MQ=255) cAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAgtgt > 2:4735716/1‑150 (MQ=255) cAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAgtgt < 2:3750545/150‑1 (MQ=255) gTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATAACAGCACCACAAACAGGATACAGGTAATGTAGAAAAAGATAACCAGCTGCCCCAGTTTCACCAGTGTGc > 1:3448865/1‑150 (MQ=255) tACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGcc < 2:1143757/150‑1 (MQ=255) aCAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCg < 1:2223641/150‑1 (MQ=255) aaTCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAAAAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGAc > 2:3077892/1‑150 (MQ=255) ctCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACg < 2:3085039/149‑1 (MQ=255) cagcagTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGcc > 2:1698864/1‑150 (MQ=255) cagcagTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGcc < 1:946446/150‑1 (MQ=255) cagcagTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGcc < 1:4618524/150‑1 (MQ=255) cagcagTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACACGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCACTGTGCCGACGcc > 1:333607/1‑150 (MQ=255) agcagTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGTTTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTTCACCAGTGTGCCGACGCCg > 2:2425549/1‑150 (MQ=255) agTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTAt < 2:2847314/150‑1 (MQ=255) gTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTAtt > 2:3551324/1‑150 (MQ=255) ttcttcACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTAttt < 2:1833322/150‑1 (MQ=255) cttcACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTTAACCCAATAACAGCACCACAAAAAGGATAAAGGTAATTTATAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTAc > 1:1130275/1‑150 (MQ=255) cACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGa < 2:78325/150‑1 (MQ=255) tGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTaa < 2:4475138/150‑1 (MQ=255) gTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTaaa < 2:3411018/150‑1 (MQ=255) aGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTATCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAAATTAGAAACAGATAAACAGCTGCCCCACTTGCACCAATGTGCCGACGCCCTATTTAACGATTGTAAACg > 1:1721527/1‑150 (MQ=255) ggATAAATTTGAAGATACTGAAACCAGTCGCTTTATCGATTTAAACCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTAACGATGGTAAACGCCa > 1:2790646/1‑150 (MQ=255) ggATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTTAACCCAATACCAGCACCACAAACAGGATAAAGGTAATGTAGAAACAGATAACCAGCAGCCCCAGGTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCa > 1:361287/1‑150 (MQ=255) ggATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCa > 2:3431941/1‑150 (MQ=255) aTAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCAtt < 2:326322/150‑1 (MQ=255) aTAAATTTGAAGATACTGAAACCAGTCGCGTTAGCGATTTAACCCAAAAACAGCACCACAAACAGGATACACGTAATGTAGAAACAGATAAACAGCTGCCCCACTTGCACCACTGTGCCGACGCCGTATTTAACCATGGTAAAAGCCaat > 1:536321/1‑148 (MQ=255) tGAAGATACTGAAACCAGTCGCTTTAGCGATTGTACCCAATAACAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCCTTGCCCCGa > 1:4358189/1‑150 (MQ=255) aaGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAAc < 1:671097/150‑1 (MQ=255) aaGATACTGAAACCAGTCGCGGTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCCTTGCCCCGAAc > 2:1022734/1‑150 (MQ=255) gATACTGAAACCAGTCGCTTTATCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGc > 2:2579831/1‑150 (MQ=255) tACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAAACAGCTGCCCCACTTGCACCAGTGTGCCGACGCCGTAATTACCGATGGTAAACGCCAATGCCCCGAACGCAc > 1:4873414/1‑150 (MQ=255) tACTGAAACCAGTCGCTTTAGCGATTGAACCCAAAACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCCTATTTACCGATGGTAAACGCCATTGCCCCGAACGCAc > 2:1635678/1‑150 (MQ=255) tGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCaa < 1:3306114/150‑1 (MQ=255) aaaCCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATa < 2:4316298/150‑1 (MQ=255) aGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGc > 2:921462/1‑150 (MQ=255) aGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGc > 2:4059267/1‑150 (MQ=255) tCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCa < 1:4799590/150‑1 (MQ=255) tCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCa < 1:2348148/150‑1 (MQ=255) gCTTTAGCGATTGAACCCAATACCAGAACCACAAACAGGATACACGAAATGTAGAAACAGAAAATCAGCTGCCCCAGTTGCAACAGTGTGACTACGCAGTATTTAACGATGGTAAACGCCATAGCCACTAACTCACCAATAGGTGCCAGa > 1:4386758/1‑150 (MQ=255) ttAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGc > 1:3043285/1‑150 (MQ=255) tAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCa < 1:3790256/150‑1 (MQ=255) aGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCAt < 1:2575241/150‑1 (MQ=255) gCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATg < 1:475163/150‑1 (MQ=255) cGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGa < 1:1673480/150‑1 (MQ=255) cGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGa < 2:3610546/150‑1 (MQ=255) aTTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATc > 2:561745/1‑150 (MQ=255) ttGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCa < 2:3169379/150‑1 (MQ=255) tGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTCTTTACCGATGGTAAACGCCAATGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCat > 2:3221347/1‑150 (MQ=255) tGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCAGGATCat > 2:567594/1‑150 (MQ=255) gAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCata < 2:540860/150‑1 (MQ=255) aaCCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCatat > 2:528186/1‑150 (MQ=255) cAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATtgat < 2:3065503/150‑1 (MQ=255) aaTACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATtgatg > 2:2145318/1‑150 (MQ=255) tACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTgatgat < 1:4690415/150‑1 (MQ=255) aCCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGatgatg < 2:4263930/150‑1 (MQ=255) cAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGcc < 2:2385899/150‑1 (MQ=255) caccacAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGaa < 2:2727759/150‑1 (MQ=255) caccacAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGaa > 2:2997677/1‑150 (MQ=255) accacAAACAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAg > 2:1539530/1‑150 (MQ=255) cacaAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGAt > 1:801483/1‑150 (MQ=255) cacaAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGAt < 2:1944623/150‑1 (MQ=255) acaAACAGGATACAGGTCATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCAGATTGATGATGCCGAAGATg > 1:451263/1‑150 (MQ=255) aaCAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGAcc > 2:4863502/1‑150 (MQ=255) aaCAGGATACAGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGAcc < 1:3983843/150‑1 (MQ=255) cAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATCTTGATGATGCCGAAGATGACCTg > 2:4109116/1‑150 (MQ=255) ggATACAGGTAATGTAGAAACAGATACTCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCg < 1:912198/150‑1 (MQ=255) aTACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCgag < 2:4271039/150‑1 (MQ=255) cAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGaaa > 1:1933919/1‑150 (MQ=255) aGGTAATGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAAc < 2:800949/150‑1 (MQ=255) gTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACtt > 1:3125373/1‑150 (MQ=255) tAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACttt < 1:189516/150‑1 (MQ=255) tGTAGAAACAGATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGa < 1:1062734/150‑1 (MQ=255) gTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGAt > 2:3738345/1‑150 (MQ=255) gTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGAt > 2:2947579/1‑150 (MQ=255) aGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGa > 2:1437301/1‑150 (MQ=255) gAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGAc > 1:4832715/1‑150 (MQ=255) aaaCAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACg < 1:2092327/150‑1 (MQ=255) cAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTa < 2:3846622/150‑1 (MQ=255) gATAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTaaa < 1:3254021/150‑1 (MQ=255) aTAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTaaaa > 1:2379305/1‑150 (MQ=255) aTAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTaaaa > 1:1340092/1‑150 (MQ=255) aTAACCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTaaaa < 1:612114/150‑1 (MQ=255) | CCGACTCGGAAGATGAAGTCCCCAGTACAATCAGCAGTTCTTCACGGATGTAGCGGATAAATTTGAAGATACTGAAACCAGTCGCTTTAGCGATTGAACCCAATACCAGCACCACAAACAGGATACAGGTAATGTAGAAACAGATAATCAGCTGCCCCAGTTGCACCAGTGTGCCGACGCCGTATTTACCGATGGTAAACGCCATTGCCCCGAACGCACCAATAGGTGCCAGACGCATGATCATATTGATGATGCCGAAGATGACCTGCGAGAAACTTTCGATGACGTTAAAAA > CP009273/3675994‑3676287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |