Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,822,340 A→C 14.3% Q12H (CAA→CAC)  xanP → xanthine permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,822,3400AC14.3% 338.1 / 18.1 182Q12H (CAA→CAC) xanPxanthine permease
Reads supporting (aligned to +/- strand):  ref base A (111/41);  new base C (11/19);  total (122/60)
Fisher's exact test for biased strand distribution p-value = 2.19e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 185 total aligned reads displayed.

ATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822191‑3822488
                                                                                                                                                      |                                                                                                                                                    
atataAAAAAGTGCATTTATCTCATTTAAATATTTATATGAGGATGTGGCAATCGTTTTCAATTATCTATCGTTCAGCTAAAAAGCCCCCTTAACAACAACGGGATAGTTTTAGATTTCTGTTTAAACCCTCGAGTCAGAAAATCCC‑Caa                                                                                                                                                      >  1:1312185/1‑150 (MQ=255)
atataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑Caa                                                                                                                                                      >  2:1516581/1‑150 (MQ=255)
 tataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAAc                                                                                                                                                     <  1:4478956/150‑1 (MQ=255)
  ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAAcc                                                                                                                                                    <  1:4669644/150‑1 (MQ=255)
   taAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCg                                                                                                                                                   >  1:1704466/1‑150 (MQ=255)
   taAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCg                                                                                                                                                   >  1:552518/1‑150 (MQ=255)
     aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGt                                                                                                                                                 >  2:4673057/1‑150 (MQ=255)
     aaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGt                                                                                                                                                 >  2:2395296/1‑150 (MQ=255)
      aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGtt                                                                                                                                                <  2:1630033/150‑1 (MQ=255)
      aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGtt                                                                                                                                                <  1:267167/150‑1 (MQ=255)
      aaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGtt                                                                                                                                                <  1:267116/150‑1 (MQ=255)
       aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCCGTTg                                                                                                                                               >  1:617272/1‑150 (MQ=255)
            gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAg                                                                                                                                          >  1:2835683/1‑150 (MQ=255)
            gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAg                                                                                                                                          >  2:2365694/1‑150 (MQ=255)
            gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAg                                                                                                                                          >  1:1849982/1‑150 (MQ=255)
                 tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGTG‑CAACCGGTTGCGCAGACTCa                                                                                                                                     <  2:2728441/150‑1 (MQ=255)
                 tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGGTGGGCAGAcaca                                                                                                                                     >  1:3256142/1‑150 (MQ=255)
                  aTCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCAGACTCaa                                                                                                                                    >  2:3322683/1‑150 (MQ=255)
                   tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTGGCGCAGACTCaaa                                                                                                                                   >  2:3354616/1‑150 (MQ=255)
                     tcATTTAAATATTTAGATGTGGTTGTGGCAAAGTTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGTTTTGTTTTGGATGTCTGTTTCCACCCTCGAGTCAGAAATTGCG‑AAACCGGTTGCGCAGACTCAAAAc                                                                                                                                 <  2:2935559/150‑1 (MQ=255)
                      cATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACaaaaaa                                                                                                                                >  1:3497038/1‑148 (MQ=255)
                       aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCACACTCAAAAccg                                                                                                                               >  2:3909965/1‑148 (MQ=255)
                       aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGATTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCAACGGTTGCGCATACTCAAAACAg                                                                                                                               >  2:2868217/1‑150 (MQ=255)
                         ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCCTTGCGCAGACACaaaaaacca                                                                                                                             >  1:1097550/1‑145 (MQ=255)
                          tAATTATTTAGTTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTGGTTGAGATAAATTGCCCGCTTTGCTACCCGGTGTTTGTTTTCGTTGTCTGTTTCCACCCTGGAGTCAGAAATGGCG‑CAACGGGTTGCGCAGACTCAAAACAGCGa                                                                                                                            <  2:2107310/150‑1 (MQ=255)
                             atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACAAAACACCGAAca                                                                                                                         >  1:2707258/1‑149 (MQ=255)
                              ttttttGATGTGGTTGTGGAAAATGTTTGTTTTTATCTTTCGGTCATCTAAAAGGCCCTTTTTGCTACCACGGTTTTTTTTTCGATGTTTGTTCCCACCCTCGATTCATAAATTGCG‑CAACGGGTTGCGCAGACTCAAAACAGCGAACTg                                                                                                                        <  1:1964122/148‑1 (MQ=255)
                               atTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                                       >  2:4129610/1‑150 (MQ=255)
                                tttAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCAGACAAAAAACAACCAACTGAt                                                                                                                      >  1:3912311/1‑150 (MQ=255)
                                   aGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAACCCG‑TGCGCACACACAAAAAAACCAACAAATTTa                                                                                                                   >  1:1273354/1‑150 (MQ=255)
                                   aGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACAGGTTGCGCAGACACAAAAAAGCGAAAAGATTTa                                                                                                                   >  1:1806565/1‑150 (MQ=255)
                                     aTGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTAcc                                                                                                                 >  2:94514/1‑150 (MQ=255)
                                       gAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGt                                                                                                               >  2:4386322/1‑150 (MQ=255)
                                       gAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACGCAAAACAGCGAACTGATTTAACGt                                                                                                               >  2:4594742/1‑150 (MQ=255)
                                          gttttgGCAAACTTTTGCTTTTATCTTTCGGTCATCTAAAATGCCCGCTTTGCTACCACGGTTTTTTTTTCTATGTTTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCtt                                                                                                            <  2:830825/146‑1 (MQ=255)
                                           aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTTCGCACACACAAAACAGCGAACAGAATTACCCTCTTg                                                                                                           >  1:3021261/1‑150 (MQ=255)
                                            tgtgGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGG‑CACCCCGGTTCGCAGACACAAAAAACAGAAAAGATTTAAACTCTTGa                                                                                                          >  1:2849113/1‑150 (MQ=255)
                                                 cAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATc                                                                                                     >  2:4276780/1‑150 (MQ=255)
                                                  aaaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCg                                                                                                    >  2:184898/1‑150 (MQ=255)
                                                   atcGTTTGCTTTTCTCTTTCGTTCAGCAAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCTATTTCTGTTTCCACCCTCGAGTCAGAAATTGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                   <  2:2731247/148‑1 (MQ=255)
                                                   aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTAACGTCTTGAAGATCGt                                                                                                   >  2:812682/1‑150 (MQ=255)
                                                       tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccgc                                                                                               >  2:2661712/1‑150 (MQ=255)
                                                        ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑GCACCGGTTGCGCCGACACAAAAAAGCGAACTGATTTAACCTCTTTAAGTTAGTccgcc                                                                                              >  1:2278674/1‑150 (MQ=255)
                                                          gCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCcgccgc                                                                                            >  2:4746202/1‑150 (MQ=255)
                                                           cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTATTGAAGATCGTCCGCCGCt                                                                                           >  2:1604547/1‑150 (MQ=255)
                                                                   tttCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCaaa                                                                                   >  2:3889404/1‑150 (MQ=255)
                                                                    gtCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGTTTTGTTTTCGAGGTCTGTTTCCACCCTCGTGTCAGAAATTGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAc                                                                                  <  2:39983/149‑1 (MQ=255)
                                                                     tCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGACGATCGTCCGCCGCTTCCTCAAAcc                                                                                 >  2:127142/1‑150 (MQ=255)
                                                                       ggTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCt                                                                               >  2:3723134/1‑150 (MQ=255)
                                                                         tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACCGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGt                                                                             >  2:1990925/1‑150 (MQ=255)
                                                                          cAGATAAAATGCCCGCTTTGCTACCTGGGTTTTTTTTTCGTTGTCTGTTTCCACCCTCGAGTCATAAATTGCG‑CAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                            <  1:2005206/150‑1 (MQ=255)
                                                                           aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGgtt                                                                           >  2:4192084/1‑150 (MQ=255)
                                                                           aGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTTAAGAGAGTACGCCGCTTCCTCAAAaccactgt                                                                           >  1:3608755/1‑145 (MQ=255)
                                                                            gCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAGACTAAAAACAGCGAACTGATTTAACGGCTTGAATATCGTCCGCCCCTTCCACAAACCCAGTTTg                                                                          >  1:3545047/1‑150 (MQ=255)
                                                                             cTAACAGGCCCGCTTTGCTACCAGGGGTTTGTTTGCGTGGTGTGTTGCCACCCGCGAGTCAGAAAATGCG‑CACCGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgc                                                                         <  2:4062868/150‑1 (MQ=255)
                                                                               aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTAACGTCTTTAAGATCGTCCGCCGCGTCCTCAAACCCAGTTTggcg                                                                       >  1:3557762/1‑150 (MQ=255)
                                                                                 aaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGG‑CCACCCGTTGCGCCGACTAAAAACACCGAACAGATTTAAAGGCTTTAATATCGTCCGCCGCGTCCACAAAACCTGGTTtgcgcc                                                                     >  1:4578193/1‑150 (MQ=255)
                                                                                 aaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCCGACTCAAAAAAGCGAACTGATTTACCGTCGTGAAGATAGTCCGCCGCGTCCGCCAACCCGGTTTgccgcc                                                                     >  1:3164003/1‑150 (MQ=255)
                                                                                  aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTAAAAACAGCGAACAGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCTCAAAACCTGTTTGGCGCCt                                                                    >  2:3694347/1‑150 (MQ=255)
                                                                                  aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCt                                                                    >  2:1106727/1‑150 (MQ=255)
                                                                                  aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGGTTgccggcg                                                                    >  2:3694316/1‑147 (MQ=255)
                                                                                   tGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACACAAAACAGCTAACTGATTTACCGTCTTTAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                                   >  2:4221868/1‑150 (MQ=255)
                                                                                         cTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                             >  2:3239542/1‑150 (MQ=255)
                                                                                         cTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCa                                                             >  2:3239700/1‑150 (MQ=255)
                                                                                            tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACACCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCGTACTCAAACCCTGTTTGCCGCCGGTCAGCATct                                                          >  2:3254987/1‑150 (MQ=255)
                                                                                               tACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAAATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCAGTCAGCATctgct                                                       >  2:3064118/1‑150 (MQ=255)
                                                                                                aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAACAGCGCACTGAGTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGGTTGCCGCCTGTCAGCATctgcag                                                      >  2:151425/1‑148 (MQ=255)
                                                                                                aCCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgctg                                                      >  2:1412071/1‑150 (MQ=255)
                                                                                                 ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTAAAAACAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCCCTTCCGCAAAACCGGTTTGCCGCCTGTCAGCATCTGCTgg                                                     >  2:4500336/1‑150 (MQ=255)
                                                                                                 ccACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCCGTTGCGCAGACACAAAAAACCGAACAGATTTACCCTCATGAATATAGTCCCCCCCGTCCTCAAACCCAGTTTTCCGCCAGTCAGCAACTTCTgg                                                     >  1:693967/1‑150 (MQ=255)
                                                                                                  ctggttaTTTTTTTCGTTGTGTGTTACCCCCCTCGAGTCATAAATGGCG‑CAACCGGCTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                                    <  1:2201568/144‑1 (MQ=255)
                                                                                                      ggATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCCGACACAAAAAACCGAACTGATTTAACGTCATGAAGATAGTCCGCCGCGTCCTCAAAACCAGTTTTGCGCCTGTCAGCAACTGCTGGCGATg                                                >  1:4832630/1‑150 (MQ=255)
                                                                                                       taTTGTTTTCGTTGTGTGTGCCCCCCCGCGAGTCCTAAAAGGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                               <  1:1480872/149‑1 (MQ=255)
                                                                                                        aTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CCACCGGTTGCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGtt                                              >  2:667057/1‑150 (MQ=255)
                                                                                                         ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCGGTTTGCCGCCGGTCAGCATCTGCGGGCGATGtta                                             >  1:806072/1‑149 (MQ=255)
                                                                                                          tGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCCAACTGATTTACCGTCTTGAAGATCGTCCGCCGCATCCTCAAACCCTGTTTGCCCCCAGTCAGCATCTGCTGGCGATGTTCg                                            >  2:1815124/1‑150 (MQ=255)
                                                                                                                   tttCTGTTTCCACCATCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGa                                   <  2:3696810/148‑1 (MQ=255)
                                                                                                                   tGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGa                                   <  2:1893493/150‑1 (MQ=255)
                                                                                                                   tGTCTGTTACCACCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGa                                   <  2:1097550/150‑1 (MQ=255)
                                                                                                                           tCCCCCCTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCa                           <  1:3557146/150‑1 (MQ=255)
                                                                                                                           tCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCa                           >  2:153308/1‑150 (MQ=255)
                                                                                                                              aCCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcg                        <  2:3543315/150‑1 (MQ=255)
                                                                                                                               cccTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcgc                       >  2:4174712/1‑150 (MQ=255)
                                                                                                                                 ctctAGTCAGAAATTGCG‑CAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCCGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                     <  2:2203976/150‑1 (MQ=255)
                                                                                                                                 ctctAGTCAGAAACTGCG‑CCCCGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                     <  1:2022210/150‑1 (MQ=255)
                                                                                                                                 cTCGAGTCAGAAAATGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                     <  2:3453981/150‑1 (MQ=255)
                                                                                                                                 cTCGAGTCAGAAAATGCG‑CAACCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                     <  2:2707258/150‑1 (MQ=255)
                                                                                                                                    tcgacAGAAATGGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTa                  <  2:3953772/146‑1 (MQ=255)
                                                                                                                                     aGTCATAAATGGCG‑CACCGGGGTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTaa                 <  1:4673057/150‑1 (MQ=255)
                                                                                                                                      gaaataaaaTGCG‑CACCCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                <  1:3148516/145‑1 (MQ=255)
                                                                                                                                      gTCATAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                <  1:3148509/150‑1 (MQ=255)
                                                                                                                                      gTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                <  2:3746218/150‑1 (MQ=255)
                                                                                                                                         aGAAATGGCG‑CAACGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg             <  2:4184324/150‑1 (MQ=255)
                                                                                                                                          taaaaTGCG‑CACCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc            <  2:3912311/149‑1 (MQ=255)
                                                                                                                                            aaaTGCG‑CAACGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa          <  1:1025840/150‑1 (MQ=255)
                                                                                                                                            aaaTGCG‑CAACCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTTAAGATCGTCCGCCGCTTCCTAAAACCCTGTTTGCCGCCTGTCAGCATCTTCTGGCGATGTTAGTTGCGGTGATCACGCCCGCGCTATTAATCTGCCa          >  1:500719/1‑150 (MQ=255)
                                                                                                                                               tGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgc       <  2:2303126/150‑1 (MQ=255)
                                                                                                                                                 cg‑cAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgcgc     >  2:3837967/1‑150 (MQ=255)
                                                                                                                                                    cAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTg   >  1:4055063/1‑150 (MQ=255)
                                                                                                                                                     aaCCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg  >  1:3112207/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
ATATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCG‑CAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGG  >  CP009273/3822191‑3822488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑