| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 283,602 | A→T | 7.8% | Y368F (TAT→TTT) | yagH → | CP4‑6 prophage; putative xylosidase/arabinosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 283,602 | 0 | A | T | 7.8% | 924.5 / 7.3 | 315 | Y368F (TAT→TTT) | yagH | CP4‑6 prophage; putative xylosidase/arabinosidase |
| Reads supporting (aligned to +/- strand): ref base A (152/123); new base T (2/33); total (154/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.90e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 322 total aligned reads displayed.
GCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAA > CP009273/283453‑283751 | cAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTAt > 2:1652677/1‑150 (MQ=255) cAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTAt < 2:4636262/150‑1 (MQ=255) cAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTAt < 2:704285/150‑1 (MQ=255) aaGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATg > 2:2601615/1‑150 (MQ=255) aaGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATg < 2:2998028/150‑1 (MQ=255) aaGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATg > 1:881971/1‑150 (MQ=255) aGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCaa < 1:4767982/150‑1 (MQ=255) ccGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACg < 1:607448/150‑1 (MQ=255) gAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGAc < 1:3352834/150‑1 (MQ=255) agcagcCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACt > 1:1986966/1‑150 (MQ=255) agcagcCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACt < 1:2326212/150‑1 (MQ=255) tgcCTGCAGCGGTTCGGGGAAACTGGGGGTACTATTTCTACGCCTGTTCGCTTGACCCGGTGCTGCAGACCCTGCGCATGCCGTT‑CTACGACACCCTCGGCTCGCTCACCGCGCGCCGGGGATTCTTACGGCTCTTTGGCAACGACTCGc < 1:4158925/149‑1 (MQ=255) tGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCaa > 1:3388756/1‑150 (MQ=255) cAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAAtt < 2:807003/150‑1 (MQ=255) aGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTc > 2:104862/1‑150 (MQ=255) ccGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGa < 2:2700410/150‑1 (MQ=255) ccGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGa > 1:2210591/1‑150 (MQ=255) cGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGAc < 2:4026147/150‑1 (MQ=255) tCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCtt > 2:665094/1‑150 (MQ=255) gCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCAccc < 2:351609/150‑1 (MQ=255) cAACTGGCGGGACGGTGTCGACGCCAGTGCGCTTGACCCGGAGCTGCAGACCGTGCGCATTCCGGT‑CGACGACACCCTCGGCGCGCGCACCGCGCGCCCGGGCGGCTGACGGCTCGTTGGCAACGACGCGCGCAATGCGCCCTTCAcccg > 2:3929619/1‑149 (MQ=255) aCTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAAt > 2:3142021/1‑150 (MQ=255) ggCGGGTCTATTTCGACGCCAGTTCGCTTGACCCGGAGCTGAAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGTATTCTTACGGATCTTTGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGa < 2:10219/150‑1 (MQ=255) gCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGAc < 2:951983/150‑1 (MQ=255) ggACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGt > 2:935342/1‑150 (MQ=255) aCGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTgg > 2:230063/1‑150 (MQ=255) cGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTg > 2:2379144/1‑150 (MQ=255) gCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTgg > 2:3270071/1‑150 (MQ=255) ccAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGgc > 1:257884/1‑150 (MQ=255) aGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGgcag > 2:4576891/1‑150 (MQ=255) ttCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGgcagca > 2:4547220/1‑150 (MQ=255) cGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACt > 1:4261341/1‑150 (MQ=255) gCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACtt < 2:4224669/150‑1 (MQ=255) gCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACtt > 2:796741/1‑150 (MQ=255) gCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACtt < 2:2390997/150‑1 (MQ=255) cTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGATCGCACCCCGCGCGCCCGGGCTTATTACGGCTCTATGGCAACGACTCGCTCATTTCGACCTACACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTc < 2:1542571/150‑1 (MQ=255) tGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGc > 2:2756537/1‑150 (MQ=255) aCCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCt > 2:2823763/1‑150 (MQ=255) cccGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCtt < 2:1493569/150‑1 (MQ=255) ggAGCTGCAGACCCCGCGCTTGCGGTT‑CGCCGACACCCTGGGCTCGCTCCCCGCGCGCCGGGGATTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCg < 1:4049524/150‑1 (MQ=255) gAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCgg > 1:3589804/1‑150 (MQ=255) gCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGc > 2:4872026/1‑150 (MQ=255) tgatgACCCTGCGC‑TTGCGTTACGACTACCCCCTCGGCGGCCACCCCGCGCGCCCGGGATAGTACGGGCTCATTGCCAACGACTCGCTCAATTCGACCTACACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAg < 1:1456962/146‑1 (MQ=255) tGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAg > 1:1388831/1‑150 (MQ=255) gACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATGCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAAc < 2:2146638/150‑1 (MQ=255) ccccATACCGTA‑CGCCCACACCCTCGGCTCGCCCACCCCGCGCCCGGGATTCTTCCGGCTATTGGGCAACGACTCGCTCAATTCGACCTTCCCCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGAt < 1:1328496/147‑1 (MQ=255) cgcATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATg > 1:678107/1‑150 (MQ=255) cgcATGCGGTT‑CGCCGACACCCCCGGCTCGCTCACCGCGCGCCCGGGCTTCTTAGGGATCTTGGCCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATg < 1:1955798/150‑1 (MQ=255) cttgcgttt‑CGACCACACCCGCGGCTCGCTCCCGGCGCGCCGGGGCTTGTTCGGGCTCTTGGGCCACGACTCGCTCAATTCGACCTCCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGa < 1:4610213/143‑1 (MQ=255) cATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGa > 2:3385101/1‑150 (MQ=255) ccGTT‑CGACGACACCCTCGGCTCGCACCCCGCGCGCCCGGGCTTCTTACGGATCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTtc < 1:3184770/150‑1 (MQ=255) tt‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCg > 1:432876/1‑150 (MQ=255) cgacgaCACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGcc > 1:1602592/1‑150 (MQ=255) cgccacCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTCCGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCACTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGt < 2:3694900/147‑1 (MQ=255) cgacACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAACCGCGGATGGAGTTCTCGCCGGt > 2:4479747/1‑150 (MQ=255) cgacACCCGGGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTCTGCCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGt < 1:1894557/150‑1 (MQ=255) acccccTCGGCTCGCACACCGCGCGCCCGGGATTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCCCCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGc < 2:1363303/147‑1 (MQ=255) acacCCGCGGCTCGCTCACCGCGCGCCCGGGCTTCTTCCGGCTCTAGGGCACCGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGc < 2:2318454/150‑1 (MQ=255) acCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCAc > 1:2736849/1‑150 (MQ=255) acCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCAc > 2:3950396/1‑150 (MQ=255) cccTCGGCTCGCTCACCGCGCGCCCGGGCTTGTTACGGCTCTAGGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACt < 2:3481657/150‑1 (MQ=255) cTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTc > 1:1687542/1‑150 (MQ=255) tCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTTGGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTcc < 2:3750537/150‑1 (MQ=255) tCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTcc > 2:3855272/1‑150 (MQ=255) cGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCca > 1:268698/1‑150 (MQ=255) ggCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCcag < 2:552110/150‑1 (MQ=255) ggCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCcag > 1:788982/1‑150 (MQ=255) ggCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCcag > 2:1610208/1‑150 (MQ=255) ggCTCGCCCCCCGCGCGCCGGGGTTTATTCCGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCcag < 1:2484195/150‑1 (MQ=255) cgcaccccGCGCGCCGGGGCTTCTTCGGGCTCTTGGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCaga < 1:104862/144‑1 (MQ=255) tcACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAgcg > 1:2998738/1‑150 (MQ=255) cACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAgcgc > 1:4692734/1‑150 (MQ=255) acggcgcgcCGGGGTTTCTTACGGCTCTTTGGAAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGcgcg < 1:3827689/147‑1 (MQ=255) cgcgcgCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCggg < 1:3616034/150‑1 (MQ=255) gcgcgcCCGGGGTTCTTAGGGCTCTTTGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCgggg < 1:228922/150‑1 (MQ=255) cgcgcCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGc > 1:645623/1‑150 (MQ=255) cgcCGGGGATTCTTCCGGATATATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTg < 1:1928674/150‑1 (MQ=255) cgcCCGGGCTTCTACCGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTg < 2:112552/150‑1 (MQ=255) ccggggCTTCTTACGGCTATTGGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGAc < 1:3109543/147‑1 (MQ=255) ccGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGAcc > 1:1613064/1‑150 (MQ=255) ccGGGCTTCTTACGGCTATTGGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGAcc < 1:4732984/150‑1 (MQ=255) cGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCt > 1:3809969/1‑150 (MQ=255) cGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCt < 2:4015724/150‑1 (MQ=255) gggCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTg > 2:3464405/1‑150 (MQ=255) gCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGct > 2:2577796/1‑150 (MQ=255) ttcttACGGCTCTTGGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGctac < 1:1093503/150‑1 (MQ=255) tctttAGGGCTATTTGTCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGctac < 1:4425005/147‑1 (MQ=255) tgttccGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGctact < 1:3909247/145‑1 (MQ=255) tcttACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGctact < 1:1878259/150‑1 (MQ=255) ttccGGCTCTAGGCCAACGACTCGCACAATTCGCCCTACACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCtactac < 1:4483163/147‑1 (MQ=255) tACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTaca > 1:2057443/1‑150 (MQ=255) aCGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTacaa > 2:1852694/1‑150 (MQ=255) cGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTacaac > 2:2927422/1‑150 (MQ=255) ggCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTacaaca > 1:718722/1‑150 (MQ=255) gCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAg > 2:4416522/1‑150 (MQ=255) gCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAg > 2:2212329/1‑150 (MQ=255) gCTATATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAg < 2:514487/150‑1 (MQ=255) aTGGCAACGACTCGCTCAATTCGACCTTCACCCACTCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCaaaa < 2:1986966/150‑1 (MQ=255) aTGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCaaaa < 2:2945274/150‑1 (MQ=255) aTGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCaaaa > 2:2134073/1‑150 (MQ=255) | GCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTT‑CGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAA > CP009273/283453‑283751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |