| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,869,881 | T→A | 18.4% | K144N (AAA→AAT) | yidA ← | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,869,881 | 0 | T | A | 18.4% | 811.0 / 171.5 | 305 | K144N (AAA→AAT) | yidA | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (140/109); new base A (26/30); total (166/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
Only 100 of 311 total aligned reads displayed.
CGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAA > CP009273/3869732‑3870030 | cgTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCAtt < 2:2890409/150‑1 (MQ=255) gTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCAatt > 2:1320208/1‑150 (MQ=255) ttATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATtc > 1:284625/1‑150 (MQ=255) tATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTtct > 1:991686/1‑150 (MQ=255) tATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTtct > 2:4178203/1‑150 (MQ=255) aTCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTtctc > 2:4827782/1‑150 (MQ=255) tCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAg < 1:2016306/150‑1 (MQ=255) cGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGa > 1:1896425/1‑150 (MQ=255) aGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAac < 2:1271669/150‑1 (MQ=255) aGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAac < 2:4398701/150‑1 (MQ=255) aaGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACAcc > 2:3698927/1‑150 (MQ=255) tACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGc < 2:3338814/150‑1 (MQ=255) aCGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCg > 2:4092020/1‑150 (MQ=255) ggCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCACCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGa > 2:316977/1‑150 (MQ=255) gcgcACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGaa < 1:1895053/150‑1 (MQ=255) gcgcACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGaa > 2:1835860/1‑150 (MQ=255) cgcACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAAt < 2:1935028/150‑1 (MQ=255) aCTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAAtggt > 2:1445664/1‑150 (MQ=255) aCTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAAtggt < 2:2981227/150‑1 (MQ=255) tttCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGc > 2:3663859/1‑150 (MQ=255) tttCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGc > 2:2514061/1‑150 (MQ=255) tttCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGc < 1:4583858/150‑1 (MQ=255) ttCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCa < 1:4416151/150‑1 (MQ=255) cGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAgg > 1:2231838/1‑150 (MQ=255) gTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGAt > 2:4012810/1‑150 (MQ=255) tataTTTCTCTTTCACTTCCTGCGGAATACGCGCGTTTGCCTGGTCGAGGTTGGCTGGTTCATCCATCATCATCTCTTTGAGGAACTGGGTATTGGGGTCCTTTTTCTCCGCTTCGCAGATCACCAGCGGAATGGTGGCAACGAAGGAtt < 2:2458197/150‑1 (MQ=255) tataTTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGAtt < 1:1707487/150‑1 (MQ=255) tatTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCa < 2:2557034/150‑1 (MQ=255) tatTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGAGTCa > 2:3481869/1‑150 (MQ=255) atTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCAt < 1:4343688/150‑1 (MQ=255) atTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCAt < 1:1958329/150‑1 (MQ=255) atTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCAt > 2:4593642/1‑150 (MQ=255) tttCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATg > 2:3268072/1‑150 (MQ=255) tttCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCGTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATg < 2:2163769/150‑1 (MQ=255) tctcTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCa < 2:746605/150‑1 (MQ=255) tctTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCAcc > 1:3305104/1‑150 (MQ=255) ctTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCg < 1:1356612/150‑1 (MQ=255) ctTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCg > 1:3018406/1‑150 (MQ=255) tttCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCgt > 1:4282228/1‑150 (MQ=255) cACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTgta > 1:2374612/1‑150 (MQ=255) acgtCCAGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTgtag < 2:4176376/147‑1 (MQ=255) aCTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTgtag > 1:1309879/1‑150 (MQ=255) ttCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTgtagta < 1:962912/150‑1 (MQ=255) tCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGtagtag > 2:1474228/1‑150 (MQ=255) ccTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGc > 1:1477805/1‑150 (MQ=255) cTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCt > 2:2263467/1‑150 (MQ=255) aaTACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATc > 1:3806684/1‑150 (MQ=255) cgcgATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGtt < 2:1888915/150‑1 (MQ=255) cTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTa < 2:1371464/150‑1 (MQ=255) ggTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACa > 1:3665526/1‑150 (MQ=255) gTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAg < 2:161589/150‑1 (MQ=255) cGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCg > 1:305393/1‑150 (MQ=255) aGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCgtg < 2:622251/150‑1 (MQ=255) aTGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCgtggtg < 1:4091294/150‑1 (MQ=255) gCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCgg > 2:297943/1‑150 (MQ=255) cGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGATTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGt > 2:1750875/1‑150 (MQ=255) ggTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTcc > 1:835704/1‑150 (MQ=255) ggTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTcc < 2:424809/150‑1 (MQ=255) tcatcaATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAgg < 1:4123093/150‑1 (MQ=255) atcaatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGc > 1:826605/1‑150 (MQ=255) atcaatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGc > 1:2450070/1‑150 (MQ=255) aatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTg > 2:3380317/1‑150 (MQ=255) aatcaTCATCACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTg > 1:2920402/1‑150 (MQ=255) atcatcatcACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTgg < 1:2219604/150‑1 (MQ=255) atcatcatcACTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTgg < 1:2868953/150‑1 (MQ=255) tcatcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGa > 1:4689121/1‑150 (MQ=255) tcatcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAAt < 2:4643452/150‑1 (MQ=255) catcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATg < 2:1747589/150‑1 (MQ=255) catcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATg < 1:1630539/150‑1 (MQ=255) atcaCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATga > 1:1005506/1‑150 (MQ=255) caCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgaga > 1:1096082/1‑150 (MQ=255) caCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgaga > 1:1772498/1‑150 (MQ=255) caCTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGATGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgaga > 1:1486748/1‑150 (MQ=255) caCTTTCAGGAACTGGGTATTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATgaga < 2:1621775/150‑1 (MQ=255) tttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAAcc < 1:1211796/150‑1 (MQ=255) ttCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCg > 2:3833182/1‑150 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACt > 1:3347766/1‑150 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACt > 1:2076591/1‑150 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACt < 1:2288064/150‑1 (MQ=255) aGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGAAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACt > 1:3945828/1‑150 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACtt < 1:4499749/150‑1 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACtt > 1:4853869/1‑150 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACtt < 1:22658/150‑1 (MQ=255) ggAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACtt < 1:4807228/150‑1 (MQ=255) gAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTc < 2:1638148/150‑1 (MQ=255) cTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTcgcg > 1:1412343/1‑150 (MQ=255) gggTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCgag < 1:1751152/150‑1 (MQ=255) gggTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCgag < 1:2634823/150‑1 (MQ=255) tATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCgagaga > 2:1066097/1‑150 (MQ=255) aTTGGGGTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGagagag > 2:4716021/1‑150 (MQ=255) ttGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGt < 1:2465057/150‑1 (MQ=255) ggggTCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGttt < 1:3132359/150‑1 (MQ=255) gggTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGtttt < 1:2677899/150‑1 (MQ=255) gggTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGtttt > 2:3037301/1‑150 (MQ=255) tCCATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTcc > 2:263980/1‑150 (MQ=255) ccATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCa > 2:4506695/1‑150 (MQ=255) ccATATTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCa > 1:3249790/1‑150 (MQ=255) cATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAg < 2:148996/150‑1 (MQ=255) aTTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAgg < 1:3396961/150‑1 (MQ=255) ttttCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGa > 1:4746732/1‑150 (MQ=255) | CGTTTATCGAGGATTTCGAGGAAGTACGGCGCACTTTTCAGCACGGTATATTTCTCTTTCACTTCCTGCGGAATACGCGCGATAGCCTGGTCGAGGATGGCGGGTTCATCAATCATCATCACTTTCAGGAACTGGGTATTGGGGTCCATTTTCTCCGCTTCGCAGAACACCAGCGGAATGGTGGCAACGAAGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAA > CP009273/3869732‑3870030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |