Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,870,295 | A→T | 23.6% | I6I (ATT→ATA) | yidA ← | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,870,295 | 0 | A | T | 23.6% | 754.0 / 256.3 | 343 | I6I (ATT→ATA) | yidA | sugar phosphate phosphatase; substrates include erythrose 4‑P and mannose 1‑P phosphatase |
Reads supporting (aligned to +/- strand): ref base A (113/149); new base T (37/44); total (150/193) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
Only 100 of 350 total aligned reads displayed.
TCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCC > CP009273/3870146‑3870443 | tctTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCa < 2:3146394/150‑1 (MQ=255) ctTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCaa > 1:2563971/1‑150 (MQ=255) ttCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATg > 1:3112668/1‑150 (MQ=255) tCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGa > 1:48035/1‑150 (MQ=255) cAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAg > 2:1499845/1‑150 (MQ=255) aGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGt > 1:3214519/1‑150 (MQ=255) ggTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGtt > 2:1697409/1‑150 (MQ=255) gTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGTGGTGATCGGGCCCCGGAAGTGTGCCAACCATATCGTAAGCAATGAGttt > 1:1685848/1‑150 (MQ=255) gTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAAt < 1:4634544/150‑1 (MQ=255) gTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAAt < 2:167319/150‑1 (MQ=255) ttGTGCACCCCTGCATACGGGCGACCCGTCGTTAGCACGACTTTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTCACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATa < 1:96485/150‑1 (MQ=255) ttGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATa < 1:4311629/150‑1 (MQ=255) tgtgCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAg < 1:1000903/150‑1 (MQ=255) cacaCCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCAt < 2:4839266/150‑1 (MQ=255) cacaCCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCAt < 2:1049686/150‑1 (MQ=255) acacCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAAAGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATATCAATGAGTTTAATAGCCATg > 1:1947343/1‑150 (MQ=255) cacCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGGTTAATAGCCATGa > 2:2893649/1‑150 (MQ=255) acCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGGGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAg > 1:3919800/1‑150 (MQ=255) ccTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCCTATCGATAGCTATGAGTTTAATAGCCAGGAGt > 2:52465/1‑150 (MQ=255) ccTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGt < 1:4733934/150‑1 (MQ=255) cTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGtt < 1:4028395/150‑1 (MQ=255) cTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGtt < 1:1569363/150‑1 (MQ=255) cTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGtt < 2:4105044/150‑1 (MQ=255) cTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGtt > 2:4222270/1‑150 (MQ=255) tGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTc > 1:2500663/1‑150 (MQ=255) aTACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTcccc < 2:1713310/150‑1 (MQ=255) tACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCa > 1:2330427/1‑150 (MQ=255) tACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCa < 2:1579721/150‑1 (MQ=255) gCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAg < 1:1129036/150‑1 (MQ=255) gCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAg > 2:248695/1‑150 (MQ=255) gACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGAt > 1:325733/1‑150 (MQ=255) cgtcgtTAGCACGACATTCACGCAACGGGCGCGAGCTGCTGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGt > 1:3086641/1‑150 (MQ=255) cgtcgtGAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGt < 2:3865957/150‑1 (MQ=255) gtcgtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGtt > 1:4517797/1‑150 (MQ=255) gtcgtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGtt > 1:2908319/1‑150 (MQ=255) gtcgtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCAGTGTTAACGGCGGGTGAAATGGTGTGATCGGGCAGAAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGtt > 1:2112980/1‑150 (MQ=255) gtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCCGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCt > 2:4705986/1‑150 (MQ=255) gtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCt < 1:276942/150‑1 (MQ=255) gtTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGACAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTCGATTGGTTCCt > 2:652200/1‑150 (MQ=255) tAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGa > 1:1834423/1‑150 (MQ=255) cACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGAccc < 1:2233273/150‑1 (MQ=255) aCGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCa < 1:2949601/150‑1 (MQ=255) cGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt < 2:2962740/150‑1 (MQ=255) cGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt > 1:3285710/1‑150 (MQ=255) cATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt > 1:862386/1‑150 (MQ=255) aTTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTa < 2:1412343/150‑1 (MQ=255) aTTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTa < 2:2279545/150‑1 (MQ=255) ttCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa > 2:3478691/1‑150 (MQ=255) tCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAc > 1:1609470/1‑150 (MQ=255) cGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgcg > 1:1396215/1‑150 (MQ=255) cGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgcg > 1:1666040/1‑150 (MQ=255) ccACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGAt > 2:4488486/1‑150 (MQ=255) cGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc < 1:298076/150‑1 (MQ=255) cGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc < 1:2136618/150‑1 (MQ=255) gggCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg < 2:4102501/150‑1 (MQ=255) gggCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg > 1:509423/1‑150 (MQ=255) gggCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg < 2:3410335/150‑1 (MQ=255) gggCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg < 1:1933287/150‑1 (MQ=255) cgAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa < 2:914354/150‑1 (MQ=255) cgAGCTGCGGCAATCGAATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa > 1:4086988/1‑150 (MQ=255) gAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaa > 1:3640518/1‑150 (MQ=255) gCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaaaa > 2:3214975/1‑150 (MQ=255) gCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa < 2:768982/150‑1 (MQ=255) gCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa > 2:260199/1‑150 (MQ=255) ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaaa > 2:4458129/1‑144 (MQ=255) ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaaa < 1:4458129/144‑1 (MQ=255) aTCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa > 1:3319065/1‑150 (MQ=255) cGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca > 2:954606/1‑150 (MQ=255) cATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc > 1:622065/1‑150 (MQ=255) aTTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCTGTACAACAccc > 2:1224704/1‑150 (MQ=255) aTTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc > 1:133004/1‑150 (MQ=255) tttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAg > 1:1755628/1‑150 (MQ=255) ggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggg < 2:3920666/150‑1 (MQ=255) gTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg > 1:2358589/1‑150 (MQ=255) gAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAt > 2:2063188/1‑150 (MQ=255) ggTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAc > 2:463873/1‑150 (MQ=255) gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAcg < 2:3349511/150‑1 (MQ=255) gATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAAcgcgcg < 2:2975665/150‑1 (MQ=255) aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGt > 1:4228869/1‑150 (MQ=255) cGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTg < 2:673068/150‑1 (MQ=255) cGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTg < 2:2005348/150‑1 (MQ=255) gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGc < 2:269041/150‑1 (MQ=255) agcagAAGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGc < 2:3543940/150‑1 (MQ=255) agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGc > 2:3251811/1‑150 (MQ=255) gcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCt < 2:2201930/150‑1 (MQ=255) aaGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCt > 1:2198502/1‑150 (MQ=255) aGGGTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCtt < 2:417840/150‑1 (MQ=255) aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCtt < 1:3672226/150‑1 (MQ=255) aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCtt < 1:192658/150‑1 (MQ=255) ggTGCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCtttt < 1:3854375/150‑1 (MQ=255) ggTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGGTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCtttt < 2:1318445/150‑1 (MQ=255) gTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCttttt < 2:2404318/150‑1 (MQ=255) gCCATCCATATCGATAGCTATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGc > 1:2786337/1‑150 (MQ=255) catccatATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCtt > 1:3947544/1‑150 (MQ=255) catATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCg < 1:3759265/150‑1 (MQ=255) atatCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGATAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCgg < 1:2923527/150‑1 (MQ=255) tatCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGa > 2:1147627/1‑150 (MQ=255) cGATAGCAATGAGATTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCCTGCTAACGCGATTCCGCTCAAAAATCTGTACACCACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAaga < 1:715661/150‑1 (MQ=255) aGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGttt < 2:48091/150‑1 (MQ=255) cAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTcc > 1:1502205/1‑150 (MQ=255) | TCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCAACGCGCGTTGCGTGCTCCCTTTTTGCTTAGCGGAAGAGTTTCC > CP009273/3870146‑3870443 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |