| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,894,935 | T→A | 5.1% | T216S (ACC→TCC) | bglH ← | carbohydrate‑specific outer membrane porin, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,894,935 | 0 | T | A | 5.1% | 1015.3 / 31.7 | 276 | T216S (ACC→TCC) | bglH | carbohydrate‑specific outer membrane porin, cryptic |
| Reads supporting (aligned to +/- strand): ref base T (125/137); new base A (6/8); total (131/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
CGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAGACACGTTGTTT > CP009273/3894786‑3895082 | cGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTtggt > 1:1596471/1‑150 (MQ=255)cGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTtggt < 2:274680/150‑1 (MQ=255) ccGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTa < 1:2745979/150‑1 (MQ=255) aCTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACg > 2:3750393/1‑150 (MQ=255) aCTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACg < 2:4099562/150‑1 (MQ=255) cTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGt > 2:67340/1‑150 (MQ=255) cTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGAGGTAACGt > 1:1671505/1‑150 (MQ=255) tttCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTa < 2:2728397/150‑1 (MQ=255) ttCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTAc < 2:4146067/150‑1 (MQ=255) ccAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACat < 1:11877/150‑1 (MQ=255) ccAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACat > 1:1567438/1‑150 (MQ=255) ccAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACat < 2:210859/150‑1 (MQ=255) gTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATc > 2:150660/1‑150 (MQ=255) cAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGaa < 2:1476275/150‑1 (MQ=255) cAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGaa > 1:302170/1‑150 (MQ=255) aCCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTg > 2:3469035/1‑150 (MQ=255) ccTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGc < 2:3033269/150‑1 (MQ=255) cTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCa < 2:4569904/150‑1 (MQ=255) cTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCa > 2:1046520/1‑150 (MQ=255) tACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCat > 1:3639398/1‑150 (MQ=255) tACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCat > 1:1088700/1‑150 (MQ=255) acacCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATGTCGGAGAACTGCata > 1:625232/1‑150 (MQ=255) acacCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCata < 2:2251109/150‑1 (MQ=255) cacCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCatat > 1:935493/1‑150 (MQ=255) cccGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAg < 1:2159832/150‑1 (MQ=255) cccGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAg < 2:1647194/150‑1 (MQ=255) cGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGtt > 1:67810/1‑150 (MQ=255) cGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGtt < 1:1027730/150‑1 (MQ=255) cGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGtt < 2:1133296/150‑1 (MQ=255) gCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTtc > 1:404544/1‑150 (MQ=255) gCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTtc < 1:3879824/150‑1 (MQ=255) tGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTtctc > 1:2713603/1‑150 (MQ=255) tGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTtctc > 1:2714943/1‑150 (MQ=255) gCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCg > 1:3174710/1‑150 (MQ=255) cAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCgg > 1:4741063/1‑150 (MQ=255) gCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTAt < 1:2086398/150‑1 (MQ=255) tGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTATGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCg > 2:2811593/1‑150 (MQ=255) cGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGcc > 2:4561640/1‑150 (MQ=255) cGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGcc < 1:535191/150‑1 (MQ=255) ccAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTGACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCa < 1:1602353/150‑1 (MQ=255) cAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAg < 1:1468645/150‑1 (MQ=255) aGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCTCCAAACCatc > 2:4584182/1‑148 (MQ=255) tCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCg < 2:3344715/150‑1 (MQ=255) aGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTa < 1:1888778/150‑1 (MQ=255) aTCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTagag > 2:1594133/1‑150 (MQ=255) tCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGt > 2:2748613/1‑150 (MQ=255) tCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGt < 1:2501632/150‑1 (MQ=255) cTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTa < 2:1026664/150‑1 (MQ=255) gATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGAGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTActg > 1:3110743/1‑150 (MQ=255) aTTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTActgc > 1:855029/1‑150 (MQ=255) tttCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGAGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTActgct < 1:2306276/150‑1 (MQ=255) agtttCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCa < 2:3918096/148‑1 (MQ=255) aTTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCa > 2:1352308/1‑150 (MQ=255) aTTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCa < 1:44255/150‑1 (MQ=255) tttCGGCGCACCGTGTTTACCCACCCAGAACTCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAAc < 2:4470788/150‑1 (MQ=255) tCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGt > 2:1642422/1‑150 (MQ=255) cGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGtt > 2:1273103/1‑150 (MQ=255) gcgcACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAc < 2:31747/150‑1 (MQ=255) gcgcACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAc < 1:2939056/150‑1 (MQ=255) cACCGTGTTTACCCACCCAGAAATCAGCCTCTGTCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccat < 2:1722687/150‑1 (MQ=255) cACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccat > 2:1250602/1‑150 (MQ=255) cACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccat < 2:351513/150‑1 (MQ=255) aCCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccatc > 2:1431259/1‑150 (MQ=255) cGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccatcca > 2:4495250/1‑150 (MQ=255) cGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccatcca < 1:1439381/150‑1 (MQ=255) gtgtTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTAccatccat > 1:3777615/1‑150 (MQ=255) tACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCAtcatca > 1:4096498/1‑150 (MQ=255) tACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGAGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCAtcatca > 1:2097817/1‑150 (MQ=255) cccacccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATcaca < 1:1925930/150‑1 (MQ=255) cccacccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATcaca < 2:4091953/150‑1 (MQ=255) cccacccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATcaca > 1:4811841/1‑150 (MQ=255) ccacccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACaa > 2:2626742/1‑150 (MQ=255) ccacccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACaa < 1:1741729/150‑1 (MQ=255) ccaGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGc > 2:2469482/1‑150 (MQ=255) caGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCa < 1:3710325/150‑1 (MQ=255) aGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCAt > 1:2781536/1‑150 (MQ=255) gAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATc < 2:3639398/150‑1 (MQ=255) aaaTCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCa > 2:88233/1‑150 (MQ=255) aaaTCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCa < 1:346892/150‑1 (MQ=255) tCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGTCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAAcc < 1:447548/150‑1 (MQ=255) tCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAAcc < 2:784401/150‑1 (MQ=255) cAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAAccc > 2:1934293/1‑150 (MQ=255) cAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAAccc > 1:4615650/1‑150 (MQ=255) cAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAAccc < 2:4229385/150‑1 (MQ=255) aGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCg > 1:4199342/1‑150 (MQ=255) tctGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTg < 1:4119916/150‑1 (MQ=255) tGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGcc > 2:4271171/1‑150 (MQ=255) gcgcAAAGGGCAGGAAACCTTTGGAGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGt > 1:19637/1‑150 (MQ=255) cgcAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGtt > 2:2698143/1‑150 (MQ=255) cAAAGGGCAGGAAACCTTTGGTGGTAACGTACATGTCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGtttt < 2:625232/150‑1 (MQ=255) cAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGtttt < 2:3382199/150‑1 (MQ=255) cAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGtttt > 2:4700422/1‑150 (MQ=255) aaaGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTc > 2:3102957/1‑150 (MQ=255) aaaGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTc > 1:711044/1‑150 (MQ=255) aaGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCg < 1:2015928/150‑1 (MQ=255) cAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTa > 1:3361823/1‑150 (MQ=255) aGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAg < 2:151913/150‑1 (MQ=255) aaCCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAGacac < 1:274200/150‑1 (MQ=255) cTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAGACACgtt < 1:4819481/150‑1 (MQ=255) tggtggTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAGACACgttgtt < 2:1916933/150‑1 (MQ=255) | CGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAGGGCAGGAAACCTTTGGTGGTAACGTACATATCGGAGAACTGCATATAGTTCTCGCCACCGGCGTTATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGTTACCATCCATCATCACAACGGCATCAACCCGTTTGCCGTTTTCGTTGTAGACACGTTGTTT > CP009273/3894786‑3895082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |