| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,897,492 | G→T | 21.5% | P489Q (CCG→CAG) | bglF ← | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,897,492 | 0 | G | T | 21.5% | 1030.0 / 237.3 | 389 | P489Q (CCG→CAG) | bglF | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component |
| Reads supporting (aligned to +/- strand): ref base G (162/143); new base T (48/36); total (210/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 403 total aligned reads displayed.
CTGACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCG > CP009273/3897343‑3897641 | tGACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCgg > 1:159997/1‑150 (MQ=255) aCTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGca < 2:3830438/150‑1 (MQ=255) aCTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGca > 1:3100941/1‑150 (MQ=255) tCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGcaca > 1:4701559/1‑150 (MQ=255) tCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGcaca > 2:3296885/1‑150 (MQ=255) cAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACaa > 1:1512001/1‑150 (MQ=255) tGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAAtct > 1:2818472/1‑150 (MQ=255) tGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAAtct > 1:2872369/1‑150 (MQ=255) cAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAAtctctc > 2:2752156/1‑150 (MQ=255) aaTGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTcc > 2:1471037/1‑150 (MQ=255) aaTGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTcc > 2:746973/1‑150 (MQ=255) aTGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTccc > 1:1005026/1‑150 (MQ=255) aTGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTccc < 1:240250/150‑1 (MQ=255) aTGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTccc < 2:4048747/150‑1 (MQ=255) ggCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGt < 1:456606/150‑1 (MQ=255) cGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCa < 2:3604323/150‑1 (MQ=255) cGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCa < 1:1468430/150‑1 (MQ=255) gtgtAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCAt < 2:2361025/150‑1 (MQ=255) gtAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCg < 1:670827/150‑1 (MQ=255) tgtgGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGa > 1:4737736/1‑150 (MQ=255) ggCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACa > 2:4456657/1‑150 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGAt < 2:129537/150‑1 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGAt > 2:289387/1‑150 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGAt > 1:906454/1‑150 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGAt < 2:3680146/150‑1 (MQ=255) gAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGAt > 1:3341343/1‑150 (MQ=255) aacaacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATa > 2:171847/1‑150 (MQ=255) acaacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATAc > 1:818959/1‑150 (MQ=255) caacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATAcc < 1:4060184/150‑1 (MQ=255) caacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATAcc > 1:588450/1‑150 (MQ=255) aacGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCg < 1:4836489/150‑1 (MQ=255) gAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGccc > 2:4659127/1‑150 (MQ=255) aaGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCt > 2:1146112/1‑150 (MQ=255) aGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTg > 1:3723420/1‑150 (MQ=255) aTTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCa < 1:3851749/150‑1 (MQ=255) tCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAgg > 1:2558212/1‑150 (MQ=255) cccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtggt > 1:1162073/1‑150 (MQ=255) cccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAggtggt > 1:3682053/1‑150 (MQ=255) ccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGgtggtg < 1:2724769/150‑1 (MQ=255) ccGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGgtggtg < 2:4136500/150‑1 (MQ=255) cGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGgtgt < 1:2459144/150‑1 (MQ=255) gCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGta < 1:2227426/150‑1 (MQ=255) aaCCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGtaat < 1:3305143/150‑1 (MQ=255) cGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAAc > 1:167174/1‑150 (MQ=255) agaACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACctc < 1:3536741/150‑1 (MQ=255) cGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgt > 2:686714/1‑150 (MQ=255) gCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtg > 1:4394093/1‑150 (MQ=255) gCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtg < 2:2693740/150‑1 (MQ=255) gCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtg > 1:716350/1‑150 (MQ=255) gCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtg < 1:1108215/150‑1 (MQ=255) cACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGgtgt < 1:451710/150‑1 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGTGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGtt > 2:805853/1‑150 (MQ=255) aCTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGtt < 1:4788930/150‑1 (MQ=255) tCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtc < 1:3361518/150‑1 (MQ=255) cACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtct > 1:3910306/1‑150 (MQ=255) cACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtct < 2:4359163/150‑1 (MQ=255) aCCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTtctc < 1:2934499/150‑1 (MQ=255) ccAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTctct > 2:4284902/1‑150 (MQ=255) aaCCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTg < 1:2666580/150‑1 (MQ=255) gggCAGAATGGCAATACCTTGACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGc < 2:1203190/150‑1 (MQ=255) ggCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCa > 2:1955702/1‑150 (MQ=255) cAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCAcc > 1:1247172/1‑150 (MQ=255) aaTGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTg < 2:2283833/150‑1 (MQ=255) cAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctg < 2:4546400/150‑1 (MQ=255) cAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctg > 1:319411/1‑150 (MQ=255) tACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctggct < 2:2967882/150‑1 (MQ=255) aCCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCgctggctg > 1:3274860/1‑150 (MQ=255) ccTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGa > 2:88702/1‑150 (MQ=255) tttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACg > 1:4150988/1‑150 (MQ=255) tttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACg < 2:2536972/150‑1 (MQ=255) ttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGt > 2:2008637/1‑150 (MQ=255) ttACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGt > 2:2614947/1‑150 (MQ=255) cAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGc < 2:3448678/150‑1 (MQ=255) aGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtg > 1:2336790/1‑150 (MQ=255) aGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtg > 2:369814/1‑150 (MQ=255) ggCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGtga > 1:1436229/1‑150 (MQ=255) aCTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaa > 2:3230774/1‑150 (MQ=255) aCTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaa > 1:230162/1‑150 (MQ=255) cAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGatgaaatgaa > 2:241934/1‑150 (MQ=255) aaaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGCAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAg > 1:3484542/1‑150 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGc < 1:1836069/150‑1 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGc < 2:1532626/150‑1 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGc < 2:1874878/150‑1 (MQ=255) aaCGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGc > 2:380411/1‑150 (MQ=255) cGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAt > 2:1059371/1‑150 (MQ=255) cGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCAt > 1:3777051/1‑150 (MQ=255) ggTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCAc < 2:3924989/150‑1 (MQ=255) ggTATCAGCGACGTGAATGAGCTGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCAc < 2:1844952/150‑1 (MQ=255) ggTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCAc > 1:3880674/1‑150 (MQ=255) aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAcc < 2:549166/150‑1 (MQ=255) aGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTAcc < 2:1592699/150‑1 (MQ=255) gCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCg < 1:3296885/150‑1 (MQ=255) cGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGa < 1:3609216/150‑1 (MQ=255) cGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGa > 1:1299304/1‑150 (MQ=255) aCGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACa < 2:4160737/150‑1 (MQ=255) aCGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACa < 2:1005026/150‑1 (MQ=255) aTGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcg > 2:3334604/1‑150 (MQ=255) tGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcgc > 1:2203810/1‑150 (MQ=255) tGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATgcgc > 1:1540011/1‑150 (MQ=255) gAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCa < 1:2076220/150‑1 (MQ=255) | CTGACTCAATGCCAATGGCGTGTAATGTGGCGAACAACGAAGCAATTCGACCCGCAACCGGAGAACGCACTTCACCAACCGAGGGCAGAATGGCAATACCTTTACCCAACAGGCCACTGGCAAACGTGGTATCAGCGACGTGAATGAGCGGCACAATCTCTCCCGTCATCGGTGAACAGATACCGCCCTGCTCAGGTGGTGTAATAACCTCTGGTGTTTTCTCTTGCGGGGCACCCTGCGCTGGCTGACGTTTAGCGGTGATGAAATGAAGCATCACCGTACCGACAAATGCGCAACCG > CP009273/3897343‑3897641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |