| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,964,617 | A→T | 27.9% | S375S (TCA→TCT) | wecB → | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,964,617 | 0 | A | T | 27.9% | 722.7 / inf | 386 | S375S (TCA→TCT) | wecB | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (134/142); new base T (59/49); total (193/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 390 total aligned reads displayed.
GGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCATATC > CP009273/3964468‑3964766 | gCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCAc > 2:4400397/1‑150 (MQ=255) cACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACt > 1:4054874/1‑150 (MQ=255) cACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACt > 1:3130159/1‑150 (MQ=255) cGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTAt > 1:3397173/1‑150 (MQ=255) cGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTAt > 2:1755355/1‑150 (MQ=255) ggATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATg < 1:3216857/150‑1 (MQ=255) cagcGAATTGTCGAGGAAGTGGCGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTg > 1:1777804/1‑150 (MQ=255) cagcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTg > 2:4638853/1‑150 (MQ=255) gAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGAc > 2:349362/1‑150 (MQ=255) aTTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCa > 1:4638432/1‑150 (MQ=255) gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCAttt > 1:2673729/1‑150 (MQ=255) cGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCt < 1:4150179/150‑1 (MQ=255) gAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTg > 2:2923671/1‑150 (MQ=255) gAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTg > 2:3571786/1‑150 (MQ=255) gAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTg > 2:2387536/1‑150 (MQ=255) ggAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGtt < 2:169315/150‑1 (MQ=255) gAAGTGACGCGTCTTTTAAAAGACGAAAACGAATCTCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTa < 2:2820583/150‑1 (MQ=255) aaGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTAt < 1:577957/150‑1 (MQ=255) gTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCg < 1:4439062/150‑1 (MQ=255) gTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTACCg < 1:63020/150‑1 (MQ=255) tGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCgg > 1:2070263/1‑150 (MQ=255) tGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCgg > 1:4522078/1‑150 (MQ=255) cgcgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACt < 1:1499727/150‑1 (MQ=255) cgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTgg > 1:4110267/1‑150 (MQ=255) cgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTgg < 1:2395779/150‑1 (MQ=255) gTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTggg > 1:4346121/1‑150 (MQ=255) ttAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATTATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTtata < 2:897125/150‑1 (MQ=255) ttAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTtata < 2:1976350/150‑1 (MQ=255) tAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTatat > 1:1221428/1‑150 (MQ=255) aaaaGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATc < 2:1066748/150‑1 (MQ=255) aaaGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCg < 2:774808/150‑1 (MQ=255) aaGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCgg > 1:949921/1‑150 (MQ=255) aGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCggg > 2:2295986/1‑150 (MQ=255) aGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCggg > 1:1812999/1‑150 (MQ=255) aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCa < 2:1053036/150‑1 (MQ=255) aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCa < 2:4586791/150‑1 (MQ=255) aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCa < 2:4250102/150‑1 (MQ=255) aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCa < 2:3966548/150‑1 (MQ=255) aaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCaa > 2:134002/1‑150 (MQ=255) aCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTCTGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAAc < 2:3661276/150‑1 (MQ=255) cGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACg < 1:231710/150‑1 (MQ=255) tatCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGgcag > 2:4797317/1‑150 (MQ=255) aaGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCAGTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCagcagc > 1:2509403/1‑150 (MQ=255) tATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGttt > 1:50363/1‑150 (MQ=255) aTGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTg < 1:1667808/150‑1 (MQ=255) aTGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTg > 2:1176354/1‑150 (MQ=255) tGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCTTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGc < 1:1843445/150‑1 (MQ=255) tGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGc < 1:4308517/150‑1 (MQ=255) aGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCt < 2:1018/150‑1 (MQ=255) aGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCt < 2:262074/150‑1 (MQ=255) aGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCt > 2:3755532/1‑150 (MQ=255) aGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCt > 2:1560977/1‑150 (MQ=255) ccGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCa < 2:653959/150‑1 (MQ=255) cgcgCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCAc < 1:1037194/150‑1 (MQ=255) cccATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCa < 2:2766375/150‑1 (MQ=255) cATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCaaa < 2:507905/150‑1 (MQ=255) aTAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCaaaa > 2:4194550/1‑150 (MQ=255) aTAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCaaaa < 1:3634548/150‑1 (MQ=255) aaCCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAAc > 1:2610935/1‑150 (MQ=255) aCCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACa > 2:2088864/1‑150 (MQ=255) cccGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAg > 1:3949860/1‑150 (MQ=255) ccGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAgg > 2:2550646/1‑150 (MQ=255) ccGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAgg < 1:4765290/150‑1 (MQ=255) ccGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAgg < 1:3055463/150‑1 (MQ=255) cGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGt < 2:2486757/150‑1 (MQ=255) gTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTa < 1:99523/150‑1 (MQ=255) aTGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAAt < 2:4666153/150‑1 (MQ=255) tGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAAtt > 2:1252405/1‑150 (MQ=255) tGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAAtt < 2:2265804/150‑1 (MQ=255) ggTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTTATTGGTGTCg < 1:480556/150‑1 (MQ=255) ggTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCg < 1:4330655/150‑1 (MQ=255) ggTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGATTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCg < 2:2440509/150‑1 (MQ=255) cAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGata < 1:4191983/150‑1 (MQ=255) cAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGata < 2:453587/150‑1 (MQ=255) aGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGatat > 1:744356/1‑150 (MQ=255) aGGCATGCTCTCGCATTCGGGAAGCGTTACAAAATAATCGGAGCTCCCGCTGAGTTTTGCGCCCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGatct < 2:2186084/150‑3 (MQ=255) gCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATca < 1:3904368/150‑1 (MQ=255) gCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATca < 1:278327/150‑1 (MQ=255) cATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATcaa < 1:1364591/150‑1 (MQ=255) cATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATcaa > 1:373856/1‑150 (MQ=255) gCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATcaacca > 2:3019761/1‑150 (MQ=255) tctcGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATcaaccaac < 1:4006141/150‑1 (MQ=255) cGCATTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATg < 2:3397173/150‑1 (MQ=255) gCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGc < 1:2928420/150‑1 (MQ=255) aTTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCgg < 1:2269535/150‑1 (MQ=255) aTTCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCgg < 1:2456748/150‑1 (MQ=255) aTTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCgg > 1:3523971/1‑150 (MQ=255) tCTGGAAGCGTTAAAAAATAATCGGATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGtt < 2:4457330/150‑1 (MQ=255) gAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATa < 1:3090167/150‑1 (MQ=255) aaGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATAc > 2:4817041/1‑150 (MQ=255) ttAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCa < 1:3314684/150‑1 (MQ=255) aaaaaaTAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAAt > 2:538925/1‑150 (MQ=255) aaaaaaTAATAGGATATCACTATGAGTTTTGCGAACATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAAAAGGTAATTGGTGTCGATATAAACCAACATGCGGTTGATACCATCAAt > 2:1471081/1‑150 (MQ=255) aataatCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTg < 2:3185681/150‑1 (MQ=255) ataatCGGATATCACTCTGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTgg < 1:1106610/150‑1 (MQ=255) tCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGaa > 1:1060891/1‑150 (MQ=255) ggATATCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAAt > 2:3324008/1‑150 (MQ=255) tatCTCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCa < 2:628544/150‑1 (MQ=255) tatCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCa > 2:2017237/1‑150 (MQ=255) aCTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCATAtc < 2:3912181/150‑1 (MQ=255) | GGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCATATC > CP009273/3964468‑3964766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |