| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,971,254 | C→T | 18.8% | L124F (CTT→TTT) | wecF → | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,971,254 | 0 | C | T | 18.8% | 727.5 / 149.4 | 293 | L124F (CTT→TTT) | wecF | TDP‑Fuc4NAc:lipidIIFuc4NAc transferase |
| Reads supporting (aligned to +/- strand): ref base C (126/112); new base T (28/27); total (154/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
Only 100 of 297 total aligned reads displayed.
CTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACG > CP009273/3971105‑3971403 | cTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGc > 2:3423883/1‑150 (MQ=255) aaCCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCtt < 2:1270220/150‑1 (MQ=255) ccGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTtttt > 2:727408/1‑150 (MQ=255) gTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTtttttt < 2:1006124/150‑1 (MQ=255) tCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTa > 2:4724698/1‑150 (MQ=255) tCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACAGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTa > 1:389147/1‑150 (MQ=255) cagcagCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTAc < 1:1370516/150‑1 (MQ=255) cagcGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCa > 2:2346420/1‑150 (MQ=255) gTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTAc > 2:2720514/1‑150 (MQ=255) gTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTAc < 2:4407186/150‑1 (MQ=255) gTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTAc < 2:2264811/150‑1 (MQ=255) tcttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGcc < 2:2451910/150‑1 (MQ=255) tcttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGcc < 2:2843298/150‑1 (MQ=255) cttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCt < 1:2658729/150‑1 (MQ=255) ttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTg < 2:3731422/150‑1 (MQ=255) ttcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTg < 2:1894712/150‑1 (MQ=255) tcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTgg < 1:350993/150‑1 (MQ=255) tcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTgg < 1:4538237/150‑1 (MQ=255) tcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTgg < 1:852947/150‑1 (MQ=255) tcCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTGGAGATCTAAGCTTTTTTACCCACTACGTCGCCTgg > 1:1022122/1‑150 (MQ=255) gTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCaaa > 2:2550433/1‑150 (MQ=255) aGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGc < 1:1238654/150‑1 (MQ=255) aGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCGTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGc > 1:506264/1‑150 (MQ=255) tCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGTGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGTTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAg > 1:4242464/1‑150 (MQ=255) tCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAg > 1:3322079/1‑150 (MQ=255) aaTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTc > 1:1796980/1‑150 (MQ=255) aTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCg < 1:2550433/150‑1 (MQ=255) aTCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCg > 2:1207231/1‑150 (MQ=255) cacaCTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCtg < 2:1909106/150‑1 (MQ=255) cacTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCtgtg > 1:3605408/1‑150 (MQ=255) acTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTgtgt > 2:2044843/1‑150 (MQ=255) tgtgGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTGGAGATATAAGCTTTTTTACACAATACGTCGCCTGGCGCAAAAGCGAGGCGGCTGTGTAt > 1:294250/1‑150 (MQ=255) ctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTGGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGc > 1:656156/1‑150 (MQ=255) ctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGcc < 2:4722208/150‑1 (MQ=255) ctggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTGCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGcc < 2:2183165/150‑1 (MQ=255) tggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCa < 1:715901/150‑1 (MQ=255) tggctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCa > 1:3658553/1‑150 (MQ=255) gctCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCAcc < 1:1040065/150‑1 (MQ=255) ctctGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCAccc < 1:4213592/150‑1 (MQ=255) ctgctgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCcgc > 2:4622822/1‑150 (MQ=255) tgctgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCcgcg > 2:653807/1‑150 (MQ=255) tgctgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCcgcg < 1:3408387/150‑1 (MQ=255) tgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCgcggcg < 2:443858/150‑1 (MQ=255) tgAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTAACCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCgcggcg > 2:2747929/1‑150 (MQ=255) tggtggCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGAttt > 2:4852487/1‑150 (MQ=255) gtggCATTAAGCCCAGCCAGTTTGTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGa < 2:4278380/150‑1 (MQ=255) tggCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAg < 2:2101828/150‑1 (MQ=255) gCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCt > 2:3388015/1‑150 (MQ=255) gCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCt < 1:4814131/150‑1 (MQ=255) aTTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCttt < 2:2103229/150‑1 (MQ=255) ttAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttt > 2:3640026/1‑150 (MQ=255) ttAAGCCCAGCCAGTATTTCTGGCATATCT‑GGGGGGCAGACCAGTATGAGCATTCCAGTGGCTTGAGATAAAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGACTGCTGAGTATTTTCCACACCCCGCGATATGATCtagt > 2:4064040/1‑147 (MQ=255) aaGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCtttttt < 1:1732597/150‑1 (MQ=255) cccAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTTcc > 1:2438492/1‑150 (MQ=255) ccagccagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGAttt < 2:2649898/136‑1 (MQ=255) ccagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAAc < 1:2753593/150‑1 (MQ=255) ccagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAAc > 1:4368251/1‑150 (MQ=255) ccagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAAc < 2:2689501/150‑1 (MQ=255) cagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACg > 2:1787875/1‑150 (MQ=255) cagTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACg < 1:4077988/150‑1 (MQ=255) gTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCa > 2:3193396/1‑150 (MQ=255) tttCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTAACCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCCCGGCGATTTGAGCTTTTTTGCCAAAACGCAccc > 2:1567735/1‑150 (MQ=255) ttCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCa > 1:3097903/1‑150 (MQ=255) cTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCaaa < 1:434112/150‑1 (MQ=255) tGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAg > 2:2811368/1‑150 (MQ=255) tGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTGGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCCCCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAg > 1:4133303/1‑150 (MQ=255) gCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt > 2:633262/1‑150 (MQ=255) gCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt > 2:1703786/1‑150 (MQ=255) gCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt < 2:1727842/150‑1 (MQ=255) gCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGt < 2:2451174/150‑1 (MQ=255) cATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTg < 2:3150197/150‑1 (MQ=255) atatCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGc > 1:2165089/1‑150 (MQ=255) t‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGc < 2:1043005/150‑1 (MQ=255) ggCAGACCTGTATGAGCTTTCCAGTGGCGGGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAAct > 1:2327469/1‑150 (MQ=255) cAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAActgc > 2:1472605/1‑150 (MQ=255) aGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAActgct < 1:1630631/150‑1 (MQ=255) aGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAActgct > 1:3032661/1‑150 (MQ=255) aGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAActgct < 2:3519293/150‑1 (MQ=255) cTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttc < 2:2401179/150‑1 (MQ=255) tGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttct < 2:419539/150‑1 (MQ=255) tATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGttcttc < 1:779943/150‑1 (MQ=255) gAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTTCGGGGCGAACTGCTGTTCTTCCCg > 2:3063996/1‑150 (MQ=255) aGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCCCCCGCGGCGATTTGAGCATTTTTGCCAAAACGCACCCCAACGTGCGGGGCGAACAGCAGTTCTTCCCGa > 2:139195/1‑150 (MQ=255) aGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGa < 1:105665/150‑1 (MQ=255) cTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGAcg > 2:112256/1‑150 (MQ=255) cTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAAAGCAACCCAATGTGCGGGGCGAACTGCTGTTCTTACCGAcc > 1:4599421/1‑149 (MQ=255) ttCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGAcgcg < 1:4622822/150‑1 (MQ=255) ccAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGa < 2:3946898/150‑1 (MQ=255) tGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGa > 1:3792510/1‑150 (MQ=255) tGGCTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGAGTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGa > 2:4116990/1‑150 (MQ=255) ggCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAc < 2:4390110/150‑1 (MQ=255) cTTGAGATATAAGTTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGAccc > 2:4513034/1‑150 (MQ=255) agaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCg > 2:4110333/1‑150 (MQ=255) agaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCg > 2:466931/1‑150 (MQ=255) agaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCg > 2:532515/1‑150 (MQ=255) gaTATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGc < 1:4693776/150‑1 (MQ=255) ataAGCTTTTTTACCCACTACGTCGCCTGGCTCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCa < 2:294250/150‑1 (MQ=255) taAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCaa > 2:862509/1‑150 (MQ=255) taAACTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCGGTTCTTCCCGACGCGGATGGACCCTTCGCTCaa > 1:1722206/1‑150 (MQ=255) aGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATa < 1:2122756/150‑1 (MQ=255) | CTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCT‑GGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACG > CP009273/3971105‑3971403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |