| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,076,055 | T→G | 12.1% | Q22P (CAG→CCG) | fdoH ← | formate dehydrogenase‑O, Fe‑S subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,076,055 | 0 | T | G | 12.1% | 804.4 / 8.6 | 342 | Q22P (CAG→CCG) | fdoH | formate dehydrogenase‑O, Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base T (69/204); new base G (45/2); total (136/206) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.36e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 344 total aligned reads displayed.
TCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGC > CP009273/4075908‑4076204 | tCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGa < 1:757922/150‑1 (MQ=255) tGGGGTTGACGTACACCCCAATGTTATTGCCGACGGTATCGCTAATGTCGTTCCCCCCTGAACAAGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcg < 2:2651374/150‑1 (MQ=37) ggggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcg‑c > 2:3851662/1‑150 (MQ=255) ggggTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGgcg‑c < 2:420910/150‑1 (MQ=255) gTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGt < 2:66515/150‑1 (MQ=255) tCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTc < 1:3116476/150‑1 (MQ=255) cGTACACCCCAATGTTATTGCCGACGTTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGATTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa < 2:2449593/150‑1 (MQ=255) cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa > 2:3343522/1‑150 (MQ=255) cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa < 2:2800974/150‑1 (MQ=255) cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa < 2:370429/150‑1 (MQ=255) acCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACCGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCg < 1:3243414/150‑1 (MQ=255) cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGAcccgt > 1:4316773/1‑147 (MQ=255) ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCCGAGGCGCCGGGGGGCAGAcctta > 1:4528788/1‑147 (MQ=25) cAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAg < 2:2184395/150‑1 (MQ=255) aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCCGAGGCG‑CGGGGGTCAGAcccgtagg > 2:4080467/1‑144 (MQ=255) aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTc > 2:1885702/1‑150 (MQ=255) tGTTATTGCCGACGGTATCGCGACTGTCGTTCCACTCTGACCACGCCACCTGACCGGCTTGCCAGCCGAGACCGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:4492817/150‑1 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:2877002/150‑1 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:2385122/150‑1 (MQ=255) ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGTCCGTTAGTcgcg > 2:4290207/1‑150 (MQ=255) tATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCgg < 1:4670356/150‑1 (MQ=255) tATTGCCGACGGTATCGCGAATGTCGTTCCACTATGAACACGCCACCTGACAGGCTTTACTGCGGATACAGGTGGTAACTTGGATTAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCgg < 1:2638234/150‑1 (MQ=37) ttGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTACCGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGaa < 2:1949577/150‑1 (MQ=255) ccGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCCGTATTAGCGGAacca > 1:3954921/1‑148 (MQ=25) cGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAacgac < 1:1864781/150‑1 (MQ=255) gACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCCTTAGTAGCGGAaccacg > 2:90256/1‑150 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCGCCGGAGGCG‑CGGGGGTGAGACCGTTAGTAGCGGAACCACGaaa > 2:1605966/1‑149 (MQ=25) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGTTGCG‑CGGGGGGGAGAACGTTAGTCGCGGAACgaagaaa > 2:836451/1‑149 (MQ=25) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAAt < 1:1959023/150‑1 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGGTAGTCGCGGAACGACGAAt > 2:3054477/1‑150 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGACGAAt > 2:3076570/1‑150 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGAGGCG‑CGGGGGTCAGAACGTTAGTCGCGGAACCACCaaa > 1:3521474/1‑149 (MQ=25) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGAGGGG‑CGGGGGGGAGACCCGTAGTGGCGGGAAGACGaaa > 1:1329021/1‑149 (MQ=21) tATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGa < 2:471700/150‑1 (MQ=255) aaTGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTg < 2:590018/150‑1 (MQ=255) aaTGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTg < 2:3265757/150‑1 (MQ=255) tGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTgag < 2:4853693/150‑1 (MQ=255) tCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGAGGCG‑CGGGGGTCAGACCCGTAGTAGCCGAACCACGAATTAAATAGTGAGAt > 2:1238080/1‑150 (MQ=21) cGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGAtt < 1:3394373/150‑1 (MQ=255) cGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGAtt < 1:3863786/150‑1 (MQ=255) gTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTg < 2:1034793/150‑1 (MQ=255) gTTCCACTCTGAACACGCCACCTGACAGGATTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTg < 1:2313869/150‑1 (MQ=255) tCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGAt < 1:4217947/150‑1 (MQ=255) ccACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCCTTAGTCGCGGTACGACGAATGATAACTTGTGATTtata > 1:3598850/1‑150 (MQ=37) cACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATaa < 2:3976245/150‑1 (MQ=255) aCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCGGTAGGCGCGGAACGACGAAAGATATGGTGAGTTTGATaat > 2:1727980/1‑149 (MQ=37) aCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGAAGAATGATATATTGATATTGATAAg > 2:1304238/1‑150 (MQ=37) tctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGcc > 2:3573150/1‑150 (MQ=255) gAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCata < 2:533627/150‑1 (MQ=255) aaCACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAAAGATATCTTGAGATTTTTAAGCCatat > 2:627627/1‑150 (MQ=255) cGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATgtcg < 1:206365/150‑1 (MQ=255) cGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATgtcg < 1:3978188/150‑1 (MQ=255) ccACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCCCCCGAGGCG‑CGGGGGGGAGACCGGTTTTCGCGGAAACACGAAATATAAGTTTTGGTTGATAATCCATATgtaggg > 2:2053150/1‑146 (MQ=16) ccACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTAGCGGAACGCCGAATGATATATTGAGATTGATAAGCCATATgtcgtc > 2:4596709/1‑150 (MQ=255) cACCTGCCAGGCTTGACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtct < 2:2968088/150‑1 (MQ=255) aCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtctc < 1:1547902/150‑1 (MQ=255) aCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtctc < 1:2138837/150‑1 (MQ=255) aCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGTGGCG‑CGGGGGTCAGACCGTTATTCGCGGAACCCCCAATGATATATTGAGATTGATAAGCCCAATttcgtcac > 1:301380/1‑148 (MQ=37) cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCg > 2:4457325/1‑150 (MQ=255) gACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGtt < 2:4763614/150‑1 (MQ=255) ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTacac < 2:4300293/150‑1 (MQ=255) cTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCt < 1:1895548/150‑1 (MQ=255) cTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCt < 2:2845279/150‑1 (MQ=255) cTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCt < 1:3057368/150‑1 (MQ=255) tttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCtt < 1:4738025/150‑1 (MQ=255) tttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCtt < 1:983191/150‑1 (MQ=255) ttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCttt < 1:4417921/150‑1 (MQ=255) gCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCcac < 2:3275076/150‑1 (MQ=255) gATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 1:2770963/150‑1 (MQ=255) gATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 2:3399596/150‑1 (MQ=255) tACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTca < 1:1521367/150‑1 (MQ=255) aCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcac < 2:1704524/150‑1 (MQ=255) gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 2:1305745/150‑1 (MQ=255) gTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCATTTCCACATTCACAAGGAAGGACtt > 2:4038339/1‑150 (MQ=255) gTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGGCAGACCCGTAGTCGCGGAACCACCAAAGATATCGTGCGATTGATAAGCCAAATGTCGTCTCCGGTACACCATTTACACAATCAAAACGAAGGAcat > 1:3144079/1‑148 (MQ=255) tCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGGGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACCAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTATTCCACATTCACAAGGAAGGACTTa > 2:4261247/1‑150 (MQ=255) tCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGAACGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATTTCGTCTACGTTACACCTTTTACACATTAACAAGGAAGGACTTa > 2:1812620/1‑150 (MQ=255) gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:1052192/150‑1 (MQ=255) gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:1412242/150‑1 (MQ=255) aGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGTGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTcc > 2:2375554/1‑150 (MQ=255) gTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCg < 2:4486775/150‑1 (MQ=255) tttCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCgg < 1:115548/150‑1 (MQ=255) tttCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCgg < 1:2541542/150‑1 (MQ=255) gCCACTTCTTCCTGGAAGTCCCCCGCCTGAGGCG‑CGGGGGTCAGACCGGTAGTCGCGGAACGACGAAAGATAACTTGAGATTTATAAGCCATATGTCGTCTCCGTTACACCTTTTACACAATCACACGGAAGGACTTAAACTCCGGCGTc > 2:2571296/1‑150 (MQ=255) cACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTg < 1:1055737/150‑1 (MQ=255) aCTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGc < 2:273234/150‑1 (MQ=255) tcCTGGAAGGCCCGCGCCTGAGGCG‑CGGGGTTCAGACCGTTAGTCGCGGAACGACGAATGATAACTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCAACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTc < 1:3723249/150‑1 (MQ=255) cTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGc > 2:3648216/1‑150 (MQ=255) tGGAAGTCCCGCGCCAGATGCG‑CGGGGGTCACAACGTTAGTCGCGGAACGACGAAAGATATCATGATATTGAAAATCCATATGTAGTCACCGATAAACCATTTCCACATTCACAAGGAAGGACATAAACACCCGCGTATGCGTGttatca > 2:1546804/1‑146 (MQ=255) ggAAGTCCCGCGCCGGCGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 1:1625519/150‑1 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa > 2:4404330/1‑150 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 1:4457325/150‑1 (MQ=255) gTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCAcc < 1:2622353/150‑1 (MQ=255) cccGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCaa > 2:1444738/1‑150 (MQ=255) ccGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAAc < 2:4779164/150‑1 (MQ=255) ccGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAAc > 1:377235/1‑150 (MQ=255) ccGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAAc < 2:4382939/150‑1 (MQ=255) cgcgCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACg > 2:3488092/1‑150 (MQ=255) ccTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTGGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATg > 1:1569808/1‑150 (MQ=255) cTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATgg < 2:3827338/150‑1 (MQ=255) | TCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGC > CP009273/4075908‑4076204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |