| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,076,068 | T→G | 6.1% | T18P (ACC→CCC) | fdoH ← | formate dehydrogenase‑O, Fe‑S subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,076,068 | 0 | T | G | 6.1% | 1036.2 / 33.7 | 360 | T18P (ACC→CCC) | fdoH | formate dehydrogenase‑O, Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base T (122/211); new base G (22/5); total (144/216) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.52e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 366 total aligned reads displayed.
GTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAGTATTGG > CP009273/4075919‑4076217 | gTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGt < 2:66515/150‑1 (MQ=255) tCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTc < 1:317776/150‑1 (MQ=255) tCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTc < 1:3118011/150‑1 (MQ=255) cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa > 2:3343452/1‑150 (MQ=255) cGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCa < 2:370429/150‑1 (MQ=255) acacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGAc > 2:2778977/1‑150 (MQ=255) cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGAcccgt > 1:4316773/1‑147 (MQ=255) ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTa > 2:626516/1‑150 (MQ=255) ccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCCCCCGAGGCGCCGGGGGGCAGAcctta > 1:4528788/1‑147 (MQ=25) aTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCGTTAGTc > 2:1885842/1‑150 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:2877002/150‑1 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:4394483/150‑1 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg < 2:4835731/150‑1 (MQ=255) tGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcg > 2:2378698/1‑150 (MQ=255) gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGTGGCG‑CGGGGGTCAGACCGTTAGTcgc > 2:2216891/1‑150 (MQ=255) gTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTcgc < 2:1483594/150‑1 (MQ=255) tATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCgg < 1:2638366/150‑1 (MQ=255) aTTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGa < 2:11671/150‑1 (MQ=255) tGCCGACGTTATCGCGAATGTCGTACCACTCTGAACACGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAac < 1:3272973/150‑1 (MQ=255) gCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAacg < 2:3836974/150‑1 (MQ=255) gACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAacgacg < 2:585872/150‑1 (MQ=255) gACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCCGTAGTCGCGGAaccacc > 1:237670/1‑149 (MQ=255) gACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCCTTAGTAGCGGAaccacg > 2:90256/1‑150 (MQ=255) cGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTATTAGCGGAACCACGaa > 2:530946/1‑150 (MQ=255) cGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGaa > 2:4653768/1‑150 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACTGGATTTACAGCCGATACTGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAAt < 1:838832/150‑1 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCGCCGGAGGCG‑CGGGGGTGAGACCGTTAGTAGCGGAACCACGaaa > 2:1605966/1‑149 (MQ=25) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAAt < 1:209952/150‑1 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAAt < 1:1959016/150‑1 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGACGAAt > 2:3076570/1‑150 (MQ=255) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCCCCGGAGGCG‑CGGGGGTCAGAACGTTAGTCGCGGAACCACCaaa > 1:3521474/1‑149 (MQ=25) ggTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCCCGCCAGAGGGG‑CGGGGGGGAGACCCGTAGTGGCGGGAAGACGaaa > 1:1329021/1‑149 (MQ=21) aTCGCGAAGGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGat < 1:3905607/150‑1 (MQ=255) tgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGGTAGTCGCGGAACGACGACTGATATCt > 2:4087778/2‑150 (MQ=255) cgAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCt < 2:3068367/150‑1 (MQ=255) aaTGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGACGAATGATATCTTg < 2:2836396/150‑1 (MQ=255) cGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGAtt < 1:3394373/150‑1 (MQ=255) gTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTg < 2:787519/150‑1 (MQ=255) gTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTg < 1:4413876/150‑1 (MQ=255) gTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTg < 2:1034793/150‑1 (MQ=255) ccACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATa < 1:1889149/150‑1 (MQ=255) ccACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCCTTAGTCGCGGTACGACGAATGATAACTTGTGATTtata > 1:3598850/1‑150 (MQ=37) cACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCGCCGGGGGCG‑CGGGGGGCAGACCGGTTTTAGCGGCACCAAGAAAGATATAATGTGATTGATaa > 1:4606771/1‑150 (MQ=21) cACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATaa < 2:3976807/150‑1 (MQ=255) aCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGGCAGACCGTTAGTCGCGGAACGAAGAATGATATATTGATATTGATAAg > 2:1304238/1‑150 (MQ=37) tctGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCAGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGcc > 2:3573150/1‑150 (MQ=255) cacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATgt < 1:2278740/150‑1 (MQ=255) cacGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATgt < 1:3984906/150‑1 (MQ=255) ccACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTGCCGCCCCCGAGGCG‑CGGGGGGGAGACCGGTTTTCGCGGAAACACGAAATATAAGTTTTGGTTGATAATCCATATgtaggg > 2:2053150/1‑146 (MQ=16) cACCTGCCAGGCTTGACAGCCGATACAGGTGGTAACGGCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtct < 2:2968088/150‑1 (MQ=255) cACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGAACCTTAGTCGCGGAACCCCGAATGTTATATTTAGATTGATAATCCAAATTTAGtct > 2:4488988/1‑150 (MQ=37) cACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCGGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGCAAGATATCTTGAGATTGATAAGCCCTATGTCGgct > 2:4289937/1‑150 (MQ=38) aCCTTACAGGCTTTACAGCCTATACAGGTGGTAACGTCTATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtctc < 1:56795/150‑1 (MQ=255) aCCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGtctc < 1:1547902/150‑1 (MQ=255) cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGGG‑CGGGGGTCAGAACGTTAGTAGCGGAAAGACGAATGATATATTGAGATTGTTAAGCCATATGTCGTCTCCg > 2:2007350/1‑150 (MQ=38) cTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCg > 2:4457397/1‑150 (MQ=255) gACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGtt < 2:4764667/150‑1 (MQ=255) ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTacac < 2:4734903/150‑1 (MQ=255) ggCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTacac < 2:4300293/150‑1 (MQ=255) cTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCt < 1:3057358/150‑1 (MQ=255) tttACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCtt < 1:983191/150‑1 (MQ=255) gCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCcac < 2:3275076/150‑1 (MQ=255) ccGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCcaca < 2:154542/150‑1 (MQ=255) gATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 2:3399596/150‑1 (MQ=255) gATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACAtt < 1:2772308/150‑1 (MQ=255) aCAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcac < 2:1705167/150‑1 (MQ=255) cAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTcaca < 1:1517896/150‑1 (MQ=255) gtAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACaaggaag < 2:1305745/150‑1 (MQ=255) gTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCATTTCCACATTCACAAGGAAGGACtt > 2:4038339/1‑150 (MQ=255) tCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGGGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACCAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTATTCCACATTCACAAGGAAGGACTTa > 2:4261247/1‑150 (MQ=255) tCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTa < 1:3796875/150‑1 (MQ=255) gATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTaaa < 2:1742327/150‑1 (MQ=255) gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:1412242/150‑1 (MQ=255) gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:1052192/150‑1 (MQ=255) gAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTc < 2:2389968/150‑1 (MQ=255) ccACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCt < 1:3962764/150‑1 (MQ=255) cACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTg > 2:2729079/1‑150 (MQ=255) cACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTg < 1:1055737/150‑1 (MQ=255) ttcttcCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTAGCGGAACGACGAATTATATAATGAGATTGATAAACCATATGTCGTCTACGTTAAACCATTTACACATTAAAAAGGAAGGACATAAAAAACCGCGTCTGCgt > 2:1837281/1‑150 (MQ=255) tcCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTc < 1:3723242/150‑1 (MQ=255) cTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACCACGAAAGATATCTTTAGATTGATAATCCAAATGTCGTCTCCGTTAAACCATTTACACAATAACAAGGAAGGACATAAAAAACGGCGTCTGCGTGTTCGc > 2:3647956/1‑150 (MQ=255) ggAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCAt < 1:1625701/150‑1 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 1:4457325/150‑1 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 1:2007350/150‑1 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa < 1:2560258/150‑1 (MQ=255) aaGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCa > 2:4404330/1‑150 (MQ=255) gTCCCGCGCAGGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTGTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCAcc < 1:2622355/150‑1 (MQ=255) ccGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAAc > 1:377235/1‑150 (MQ=255) cgcgCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACg > 2:3488092/1‑150 (MQ=255) cgcaCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACg < 1:1121283/150‑1 (MQ=255) gcCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAAt < 2:2517112/150‑1 (MQ=255) ccTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTGGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATg > 1:1569808/1‑150 (MQ=255) tGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGc < 1:41972/150‑1 (MQ=255) tGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGc > 2:451439/1‑150 (MQ=255) gAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCg < 2:2155737/150‑1 (MQ=255) gcg‑cGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTa < 1:3090672/150‑1 (MQ=255) cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAg > 2:3160824/1‑150 (MQ=255) cgGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAg < 2:3808518/150‑1 (MQ=255) gggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAGTAt < 2:2652186/150‑1 (MQ=255) ggTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAGTAtt < 1:4712638/150‑1 (MQ=255) | GTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCG‑CGGGGGTCAGACCGTTAGTCGCGGAACGACGAATGATATCTTGAGATTGATAAGCCATATGTCGTCTCCGTTACACCTTTTCCACATTCACAAGGAAGGACTTAAACTCCGGCGTCTGCGTGTTCGCATCACCAACGAATGGCGTTAAAGTATTGG > CP009273/4075919‑4076217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |