| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,236,535 | T→A | 8.1% | intergenic (‑188/‑177) | malE ← / → malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,236,535 | 0 | T | A | 8.1% | 745.2 / 5.1 | 225 | intergenic (‑188/‑177) | malE/malK | maltose transporter subunit/fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Reads supporting (aligned to +/- strand): ref base T (91/109); new base A (22/2); total (114/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
AAACGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGAT > CP009273/4236389‑4236684 | aaCGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACg < 1:4049340/150‑1 (MQ=255) aCGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTTGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTTCAAGCAACATCACGa > 2:1501203/1‑150 (MQ=255) aCGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCCCATAAAATCGCCACGATTTTTGCAAGCAACATAACGa > 2:3960628/1‑150 (MQ=255) cGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGTTCTCTGTTAAAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACCATTTTTGCAAGCAACAACACGaa > 2:2194302/1‑150 (MQ=255) tctAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGTTATCTTTTTAAGAATTGTGGGTAATTTTGTGGTTCGCACAAAAAAAAGCCACGATTTTTTGAAACAACAACACGAAAATcc > 1:4308157/1‑150 (MQ=255) tAGTTTCTTTATACGGCAACCTCTTTCCAGCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCtt < 2:2458418/150‑1 (MQ=255) aGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTTTGATCTCTGTCACAGAATTGGCGGTAATGTGGTGATTCGCACAAAACATACCCCCGCTTTTTGCAAGCAAAAAAACGAAAATACTTa > 2:4570924/1‑150 (MQ=255) aGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTa < 1:1574302/150‑1 (MQ=255) aGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGTTCTCTGTCACAGAATTGGCGGTAATGTGGTGATGCGCACATAAAAAAGCCACGATTTTTTCAAACAACATCACCAAATTCCTTa > 2:4574056/1‑150 (MQ=255) aGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGGGTTCTCAGTTAAAGAAATTGCGGGAATGTGGAGATTCGCACAAAAAAAAGCCACCAATTTTTCAAGCAACAAAAAGAAAttacata > 1:1185877/1‑145 (MQ=255) tttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACa < 1:4634061/150‑1 (MQ=255) tttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGGTTGGTGTTATCTGTTAAAGAAATTTCGGTAATGTTGTTATGCGCACAAAAAAAAGCCACCATTTTTTCTAGCAACAAAACCAAAATGCTTaaa > 1:2586475/1‑148 (MQ=255) ttCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACAt < 1:883234/150‑1 (MQ=255) ttATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGAcc < 1:1010254/150‑1 (MQ=255) tataCGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTTTGTGTTCTGTGGTTCAGAAATTGCGGGAAATTGGAGATTCGCACAAAAAAAAGCCACCATTTTTTCAAGCAACAACAAGAAATtacatacaataccg > 1:1813854/1‑144 (MQ=255) ataCGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTc < 1:2844833/150‑1 (MQ=255) aCGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAGATTCCTTACATGACCTCgg < 2:2212757/150‑1 (MQ=255) ggCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGTTCTCTTTTAAAAAATTTGCGGTAATGTGGAGATGCGCACAAAAAAAAGCCACGATTTTTGCAAGCAACAACACGAAATTACATACATGACCTCGGtt > 2:108401/1‑150 (MQ=255) ggCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTAAAGAAATTGCGGTAATGTGGAGATTCGCACATAAAAAAGCCACGAATTTTGCAAGCAACAACACGAAATTACATACAAGACCACgggt > 2:1352863/1‑148 (MQ=255) aCCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGt < 2:4761025/150‑1 (MQ=255) tctTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTca < 1:532109/150‑1 (MQ=255) tctTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGTTCTCATTTTCAGAATTTGGGGGAAATTTGTGATGGGCCCAAAAAAAACCCCCCATTTTTGCAAGCAACATAACCAAATTACATAAAAGACCACCGTTTAtttaa > 1:2797005/1‑148 (MQ=255) ctTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTcac < 2:3161062/150‑1 (MQ=255) tttCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTcaca < 2:4194538/150‑1 (MQ=255) ttCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAg < 1:1318771/150‑1 (MQ=255) tCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTTGCGGTAATGTGGAGGTTCGCACATAAAATCGCCACGATTTTTTGAAGCAACATCACGAAAATACTTACATTACCGCGGGTTTGTTAACAGa > 2:4401826/1‑150 (MQ=255) ccATCCTCCTTGCCCCTACGCCCCACCGTCGCGTTGTGTGATATATGTTACAGAATTTGCGGTAATGTGGAGATGCGCACAAAAAATCGCCACGATTTTTTCAAGCAACAACACGAAAATCCTTACAAGACCACGGTTTTGTTGACAGaa > 2:1663331/1‑150 (MQ=255) cATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAg < 1:357485/150‑1 (MQ=255) aTCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTTTTATCTGTTACAGAATTTGCGGTAATGTGGAGATTCGCACATAAAATAGCCACGATTTTTTACAGCAAAATCACGAAAATCCATACATGACCTCGGTTTTGTTCACAGAAga > 2:2131827/1‑149 (MQ=255) tcctTGCCCCTACGCCCCACCGTCGCTTTTTGTGTTCACGGTTACAGAATTTGCGGTAAAGTGGAGATGCGCCCATAAAATAGCCACGATTTTTGCAAGCAACAAAACGAAAATACTTACATGACCACGGGTTAGTTAACATAAGCCgtg > 2:1722902/1‑150 (MQ=255) cctTGCCCCTACGCCCCACCGTCGCGGTTTGTGTTATCGGTTACACAAATGGCGGTAATGTGGAGATGCGCACAGAAAAAAGCCCCCATTTTTTCAAGCAACAACACCAAAATCCGTACCATAACGCGGGTTAGTTCAAAGAAGCCgggt > 2:2876190/1‑150 (MQ=255) ctTGCCCCTACGCCCCACCGTCGCTTTGTGTGTTATCTGTTACAGAATTGGGGGTAAATTGGAGATGCGCCCAAAAAATCGCCACGATTTTTGCAAGCAACAACACACAATTCCATACATGAACACGGTTTATTTAACAGAAGACGTGtt > 2:3314053/1‑150 (MQ=255) ctTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTAAAGAATTGGCGGTAATGTGGCGATGCGCACATAAAAAAGCCCCGCTTTTTGCAAGCAACAACACGAAATTGCATACATTACCTCGGTTTAGTTGACAGAAGCCGTGtt > 2:4120913/1‑150 (MQ=255) gCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTtctc < 1:3296574/150‑1 (MQ=255) gCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTtctc < 1:2614630/150‑1 (MQ=255) ccccTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCa < 2:4645251/150‑1 (MQ=255) ccTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAtc < 2:2023146/150‑1 (MQ=255) cTACGCCCCACCGTCGCTTTTTTTTTTATATGTTAAAAAAATTGCGGTAAATTGGAGATGCGCAAAAAAAATAGCCACCATTTTTTAAAGCAAAAAAAACAAAATACATACATTAACTAGGTTTATTTAAAATAAACCGTGttataatac > 2:74783/1‑143 (MQ=255) cTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCAtcc < 2:552107/150‑1 (MQ=255) cACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGcct < 1:1894801/150‑1 (MQ=255) cGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGcctcct < 1:1086519/150‑1 (MQ=255) gTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCctcctc > 1:1654514/1‑150 (MQ=255) cGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTccc > 1:2554975/1‑150 (MQ=255) cGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTccc > 2:3049656/1‑150 (MQ=255) cTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTccccc > 2:794189/1‑150 (MQ=255) gtgtgATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaa < 2:2715699/150‑1 (MQ=255) gtgATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaaaa < 1:3035266/150‑1 (MQ=255) gATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATaaaaaa > 1:361024/1‑150 (MQ=255) tctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGccc > 1:3716928/1‑149 (MQ=255) tctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCa < 2:1546982/150‑1 (MQ=255) ctGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAg < 2:2316561/150‑1 (MQ=255) tGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAgg < 2:2567908/150‑1 (MQ=255) aGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTgg < 2:2372033/150‑1 (MQ=255) aGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTgg < 2:2374163/150‑1 (MQ=255) aGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTgg < 2:4863173/150‑1 (MQ=255) tGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAt < 2:2791960/150‑1 (MQ=255) tGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAt > 1:1781930/1‑150 (MQ=255) ggCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAtt > 1:3969364/1‑150 (MQ=255) ggCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAtt > 2:303591/1‑150 (MQ=255) gCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGAttt > 2:2748788/1‑150 (MQ=255) tAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGc < 2:129953/150‑1 (MQ=255) tAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGc < 2:1737611/150‑1 (MQ=255) tAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGAAACAACACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCACATCCTCCCGCCTCCCCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGc < 1:2192620/150‑1 (MQ=255) aTGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCa > 1:3477301/1‑150 (MQ=255) gtgGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCCTCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCAtc > 2:2047297/1‑150 (MQ=255) gtgGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCAtc < 2:4100828/150‑1 (MQ=255) gagaTGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTcc > 2:3859656/1‑150 (MQ=255) gaTGCGCACATAAAATCGCCACGATTTTTTCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtg < 2:3671007/150‑1 (MQ=255) tGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtgat > 2:3537006/1‑150 (MQ=255) gcgcACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCtgatg > 1:1991013/1‑150 (MQ=255) gcACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGAc < 2:3614111/150‑1 (MQ=255) gcACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGAc > 1:3480857/1‑150 (MQ=255) acaTAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGc > 2:2160760/1‑150 (MQ=255) aTAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCAt > 1:3242243/1‑150 (MQ=255) tAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATa > 1:2524774/1‑150 (MQ=255) tAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATa < 1:4406895/150‑1 (MQ=255) aaaaTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAg > 2:2394095/1‑150 (MQ=255) aaTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTc < 2:4467316/150‑1 (MQ=255) aTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCa > 2:15764/1‑150 (MQ=255) aTCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCa > 1:4438905/1‑150 (MQ=255) tCGCCACTTTTTTTGCAAGCAAAATCACTAAATTCCTTACATGACCTGGGTTTATTACACATAAGCCGTGTTCTCACCCCCCCGCCACCCCCCCCATACAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAg < 1:2860007/150‑1 (MQ=255) tCGCCACTATTTTTGAAAGAAACAACACTAAATTCCTTACTTGACCTGGTTTTATTTCACATACGCCTTGTTCTCAGCCCCCCGCCCCCACCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAg < 1:428196/150‑1 (MQ=255) tCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAg < 2:4544560/150‑1 (MQ=255) cGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGc > 1:2362407/1‑150 (MQ=255) cACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCca < 2:1151827/150‑1 (MQ=255) cACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCca > 2:922038/1‑150 (MQ=255) cACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCca < 2:197266/150‑1 (MQ=255) aCGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcat > 2:3927774/1‑150 (MQ=255) cGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatc > 1:3348893/1‑150 (MQ=255) gATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatca > 2:3852095/1‑150 (MQ=255) aTTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCcatcat < 2:2997793/150‑1 (MQ=255) ttttGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGa < 2:1399660/150‑1 (MQ=255) caagcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGtt > 2:3519838/1‑150 (MQ=255) caagcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGtt > 2:1064934/1‑150 (MQ=255) agcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGc > 2:1706105/1‑150 (MQ=255) gcaaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCt < 2:4308157/150‑1 (MQ=255) aaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGt > 2:3130865/1‑150 (MQ=255) aaCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGt > 1:1752162/1‑150 (MQ=255) aCATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTc < 1:1515192/150‑1 (MQ=255) cATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAACAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCg < 2:3049302/150‑1 (MQ=255) | AAACGGACTCTAGTTTCTTTATACGGCAACCTCTTTCCATCCTCCTTGCCCCTACGCCCCACCGTCGCTTTGTGTGATCTCTGTTACAGAATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCTTACATGACCTCGGTTTAGTTCACAGAAGCCGTGTTCTCATCCTCCCGCCTCCTCCCCCATAAAAAAGCCAGGGGGTGGAGGATTTAAGCCATCTCCTGATGACGCATAGTCAGCCCATCATGAATGTTGCTGTCGAT > CP009273/4236389‑4236684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |