| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,323,686 | C→A | 21.6% | D28Y (GAT→TAT) | basR ← | response regulator in two‑component regulatory system with BasS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,323,686 | 0 | C | A | 21.6% | 829.3 / 183.8 | 309 | D28Y (GAT→TAT) | basR | response regulator in two‑component regulatory system with BasS |
| Reads supporting (aligned to +/- strand): ref base C (111/131); new base A (26/41); total (137/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 311 total aligned reads displayed.
GATCAGTACCGGCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCAACGCCAGT > CP009273/4323537‑4323835 | aTCAGTACCGGCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCg < 1:1450077/150‑1 (MQ=255) tCAGTACCGGCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGc > 2:962947/1‑150 (MQ=255) cGGCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTa > 2:2965155/1‑150 (MQ=255) gCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGc > 2:3122171/1‑150 (MQ=255) gggTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCtt > 2:1231089/1‑150 (MQ=255) gTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCg < 1:871309/150‑1 (MQ=255) tataTTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCgg > 1:594143/1‑150 (MQ=255) atTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGttt > 1:4368146/1‑150 (MQ=255) ttttttCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTg > 2:3247823/1‑150 (MQ=255) tttttCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTgc > 1:4459966/1‑150 (MQ=255) tttttCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTgc < 1:58851/150‑1 (MQ=255) ttttCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTgcg < 1:4590248/150‑1 (MQ=255) cTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGcgccgc < 2:4059968/150‑1 (MQ=255) cTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGcgccgc > 1:2355598/1‑150 (MQ=255) cTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGcgccgc > 1:2356432/1‑150 (MQ=255) tGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCgccgcc < 2:731516/150‑1 (MQ=255) gCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCa < 1:448953/150‑1 (MQ=255) cGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGa < 2:1108265/150‑1 (MQ=255) ggATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGaa > 2:767410/1‑150 (MQ=255) ggATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGaa > 2:817808/1‑150 (MQ=255) gATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAAt > 1:3304479/1‑150 (MQ=255) gATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAAt < 2:4669002/150‑1 (MQ=255) cGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGt > 2:3335786/1‑150 (MQ=255) gggCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTc > 1:1016477/1‑150 (MQ=255) gggCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTc > 2:4777350/1‑150 (MQ=255) cGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCt < 1:4158370/150‑1 (MQ=255) cGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCt < 1:4304300/150‑1 (MQ=255) gagaAAATGCAGTCCATCTTCGTCGGGTAACCCTACATCCAGTTCCACGAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCTTCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTg < 2:2286438/150‑1 (MQ=255) gagaAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTg < 1:4093994/150‑1 (MQ=255) aaaTGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAAt < 1:1556430/150‑1 (MQ=255) aTGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATaa > 1:2963228/1‑150 (MQ=255) aTGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATaa < 2:3935507/150‑1 (MQ=255) gCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACa < 1:2082401/150‑1 (MQ=255) cAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTATTGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAg < 2:3155435/150‑1 (MQ=255) tCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGt < 1:3213216/150‑1 (MQ=255) tCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGt > 1:2053237/1‑150 (MQ=255) aTCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATc < 2:3593202/150‑1 (MQ=255) tCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCg < 1:983102/150‑1 (MQ=255) tCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCg > 2:1551661/1‑150 (MQ=255) tCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCg > 2:2406546/1‑150 (MQ=255) ttCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTc < 2:1827197/150‑1 (MQ=255) ttCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTc < 2:2503802/150‑1 (MQ=255) tcgtcgGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCt < 2:826056/150‑1 (MQ=255) gtcgGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTc > 1:3347155/1‑150 (MQ=255) tcgGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTca > 2:3782626/1‑150 (MQ=255) cgGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTcaa > 1:4573255/1‑150 (MQ=255) gggTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTcaac > 1:2321577/1‑150 (MQ=255) tAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAAt < 2:4388830/150‑1 (MQ=255) tAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAAt > 1:946253/1‑150 (MQ=255) tAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAAt < 2:1607739/150‑1 (MQ=255) aaCCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATc < 2:2182650/150‑1 (MQ=255) aCCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCa < 2:4481252/150‑1 (MQ=255) cccTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAg > 1:2173976/1‑150 (MQ=255) cTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGaa < 1:4800285/150‑1 (MQ=255) tAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAt > 2:273211/1‑150 (MQ=255) tAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAt < 2:640091/150‑1 (MQ=255) aaaTCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAtt < 1:2639423/150‑1 (MQ=255) aaTCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAttt < 1:2933661/150‑1 (MQ=255) aTCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAtttt < 2:3520222/150‑1 (MQ=255) aTCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAAtttt > 2:510657/1‑150 (MQ=255) tCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTttc < 1:3757218/150‑1 (MQ=255) gTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTttcattc > 1:4689517/1‑150 (MQ=255) tACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTttcattca < 1:273211/150‑1 (MQ=255) accaccAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATtcac < 2:3006545/150‑1 (MQ=255) ccaccaGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATtcact < 1:3576007/150‑1 (MQ=255) ccaccaGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATtcact < 1:3494357/150‑1 (MQ=255) ccaGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATtcactcac > 1:813337/1‑150 (MQ=255) caGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTcactcact < 1:3167915/150‑1 (MQ=255) ggCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCActct > 1:66241/1‑150 (MQ=255) cTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTcc < 2:1682397/150‑1 (MQ=255) cTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTcc > 1:2906625/1‑150 (MQ=255) tGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCt > 1:1135370/1‑150 (MQ=255) gTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTg < 2:442911/150‑1 (MQ=255) tAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGc > 2:2002505/1‑150 (MQ=255) tAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGc > 2:1465788/1‑150 (MQ=255) tAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGc > 2:1464437/1‑150 (MQ=255) tGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAg > 2:1016290/1‑150 (MQ=255) ccTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTTCAg > 2:2546003/1‑150 (MQ=255) cTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGa < 1:3866841/150‑1 (MQ=255) tCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGaa < 1:291174/150‑1 (MQ=255) cAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAat > 1:1986675/1‑150 (MQ=255) tGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCg < 2:663122/150‑1 (MQ=255) tGTTCCGCCATCCGCGCGGTTGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCg < 2:751591/150‑1 (MQ=255) gTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGc > 2:88708/1‑150 (MQ=255) tCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAg > 1:2518619/1‑150 (MQ=255) gCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCt < 1:3947970/150‑1 (MQ=255) aTCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGt < 1:3251022/150‑1 (MQ=255) tCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTa > 1:2251005/1‑150 (MQ=255) tCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTa < 1:1762741/150‑1 (MQ=255) tCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTa > 2:4600407/1‑150 (MQ=255) tCCGCGCGGTTGTCACGCTATCGCACGCGTAGACTTCGGTTTGCGCCGCCAGAATCAGTACCTGCAATAACAGAGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTa < 1:1334069/150‑1 (MQ=255) ggTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTc < 1:2263862/150‑1 (MQ=255) tGTCACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGtc > 1:742396/1‑150 (MQ=255) tCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACCGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGtctc < 2:4579037/150‑1 (MQ=255) tCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGtctc < 1:960334/150‑1 (MQ=255) tCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGtctc < 2:1384556/150‑1 (MQ=255) cACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCa > 2:2630814/1‑150 (MQ=255) cACGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCa > 2:1874834/1‑150 (MQ=255) aCGCTATAGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCaa < 1:1596253/150‑1 (MQ=255) tCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCAACGCCAg > 2:2239459/1‑150 (MQ=255) | GATCAGTACCGGCAGGGTATATTTTTTCTGCCGGATACGGGCGAGAAAATGCAGTCCATCTTCGTCGGGTAACCCTAAATCCAGTACCACCAGGCTGTAATGACCTGCCTCAAGGCTTTGTTCCGCCATCCGCGCGGTTGTCACGCTATCGCACGCGTAGCCTTCGGTTTGCGCCGCCAGAATCAGTCCCTGCAATAACAGCGTATCGTCTTCAACAATCAGAATTTTCATTCACTCACTCTCCTGCAAGTTTGCAGAATATCATCCGCAGCCTGGTAATACTTCGTCTCAACGCCAGT > CP009273/4323537‑4323835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |