| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,475,053 | A→T | 5.5% | V239D (GTC→GAC) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,475,053 | 0 | A | T | 5.5% | 1067.0 / 38.7 | 291 | V239D (GTC→GAC) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base A (130/145); new base T (13/3); total (143/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.45e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 328 total aligned reads displayed.
CATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGA > CP009273/4474904‑4475202 | catcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgaccga < 1:3225570/150‑1 (MQ=255)catcCATGACTTCTGAAGGCTTTATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACAGACATCAGCGATTCGTTTTGAGAACCCTgaccga > 2:4709119/1‑150 (MQ=255) tcCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTgaccgacc > 1:142198/1‑150 (MQ=255) cATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGc > 1:3512596/1‑150 (MQ=255) tGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCa < 2:4620143/150‑1 (MQ=255) gCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAg > 2:2233415/1‑150 (MQ=255) ccTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGa < 1:405016/150‑1 (MQ=255) ttCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATa < 2:296249/150‑1 (MQ=255) tCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAg < 2:1373458/150‑1 (MQ=255) gAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGaa > 1:2472786/1‑150 (MQ=255) gAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGaa > 1:4311975/1‑150 (MQ=255) cTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGTCCGCCAGATAGGAATGCAt < 1:4600324/150‑1 (MQ=255) gATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCTACCGCCAGATAGGAATGCATccc > 2:2358786/1‑150 (MQ=255) gATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATccc > 1:3940674/1‑150 (MQ=255) gATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATccc < 1:2397959/150‑1 (MQ=255) tCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCa < 2:1637858/150‑1 (MQ=255) tCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCa < 2:138586/150‑1 (MQ=255) tACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCtt > 2:4411807/1‑150 (MQ=255) aCCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCACCAGATAGGAATGCATCCCCAGCTCttt > 2:4480923/1‑150 (MQ=255) cgccgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCa > 1:1914141/1‑150 (MQ=255) cgGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATct > 1:2670642/1‑150 (MQ=255) ggAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATctg < 2:1899907/150‑1 (MQ=255) aGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATctgct > 1:3441166/1‑150 (MQ=255) gAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTc > 1:4340343/1‑150 (MQ=255) gAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTc < 2:3133641/150‑1 (MQ=255) ttAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGa < 1:1188846/150‑1 (MQ=255) tAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGAt < 1:1884142/150‑1 (MQ=255) aCCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAAc < 1:138778/150‑1 (MQ=255) ccTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAAcg > 2:1532086/1‑150 (MQ=255) aCCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGt < 2:184022/150‑1 (MQ=255) cccACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtg > 1:2274703/1‑150 (MQ=255) cccACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtg > 1:2742844/1‑150 (MQ=255) ccaccaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtga > 2:2041981/1‑150 (MQ=255) caccaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgat < 1:3421823/150‑1 (MQ=255) accaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgatg < 2:2018411/150‑1 (MQ=255) accaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgatg < 1:3753578/150‑1 (MQ=255) ccaGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGtgatga < 2:3623268/150‑1 (MQ=255) caGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGCTGAc > 2:2016431/1‑150 (MQ=255) caGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGAc > 2:3918413/1‑150 (MQ=255) caGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGAc < 2:1924213/150‑1 (MQ=255) caGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGAc > 2:2564641/1‑150 (MQ=255) aGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACa < 1:3271652/150‑1 (MQ=255) aGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACa > 1:1636771/1‑150 (MQ=255) aGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACa < 2:2153342/150‑1 (MQ=255) cACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGTCCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACAtt > 1:1597868/1‑150 (MQ=255) aTTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTg < 2:2921219/150‑1 (MQ=255) ttGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGc > 1:4264727/1‑150 (MQ=255) ttGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGc > 1:4584226/1‑150 (MQ=255) tGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCt < 2:3977813/150‑1 (MQ=255) tGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCt < 1:802329/150‑1 (MQ=255) tGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCt < 1:4499373/150‑1 (MQ=255) gggCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTg < 1:1110984/150‑1 (MQ=255) ggCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGt < 1:3054917/150‑1 (MQ=255) tGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCt > 1:1068400/1‑150 (MQ=255) cATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGt < 2:2680667/150‑1 (MQ=255) aTCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTc > 1:2564126/1‑150 (MQ=255) tCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTca > 2:618730/1‑150 (MQ=255) cTTCCGACGCGTTGCCTTTGTACTCAATCACCGACCTCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcag < 2:4194581/150‑1 (MQ=255) cTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcag > 1:4408625/1‑150 (MQ=255) ttCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagc < 2:4154894/150‑1 (MQ=255) ccGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagcca < 1:1772717/150‑1 (MQ=255) gACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTcagccagc > 1:151548/1‑150 (MQ=255) ttGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcgc > 1:27984/1‑150 (MQ=255) ttGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcgc > 1:28483/1‑150 (MQ=255) tGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGgcgcg > 1:4866471/1‑150 (MQ=255) ccTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCt < 1:644262/150‑1 (MQ=255) ccTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCt < 1:263780/150‑1 (MQ=255) ccTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCt < 1:886767/150‑1 (MQ=255) tACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGaa > 2:3361845/1‑150 (MQ=255) aCTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAg > 1:4823736/1‑150 (MQ=255) cAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGa > 2:3234184/1‑150 (MQ=255) aaTCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAg < 1:3900571/150‑1 (MQ=255) aCCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTaa < 2:3574285/150‑1 (MQ=255) cGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgc > 1:1742132/1‑150 (MQ=255) gACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgcg < 2:4220306/150‑1 (MQ=255) aCATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgcgg > 1:3192587/1‑150 (MQ=255) cATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgcggc > 2:2073718/1‑150 (MQ=255) aTCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgcggcg > 1:1922945/1‑150 (MQ=255) aTCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAgcggcg > 2:3481197/1‑150 (MQ=255) cAGCGATTGGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGtt < 1:3032506/150‑1 (MQ=255) cAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGtt < 1:335367/150‑1 (MQ=255) ctaTTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACa < 1:827526/148‑1 (MQ=255) aTTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGa < 2:4311975/150‑1 (MQ=255) aTTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGa > 1:1347095/1‑150 (MQ=255) ttCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGat < 2:1814961/150‑1 (MQ=255) gTTTTGCGAACCCTGCCCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATAtt < 1:3406931/150‑1 (MQ=255) gTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATAtt < 2:1138138/150‑1 (MQ=255) ttGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTcgg > 2:3288586/1‑150 (MQ=255) tGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTcggc < 1:4700821/150‑1 (MQ=255) tGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTcggc > 1:4767928/1‑150 (MQ=255) aaCCCTGACCGTCCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCa > 1:1209173/1‑150 (MQ=255) ccTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCatat < 2:1256174/150‑1 (MQ=255) tGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTg > 2:749018/1‑150 (MQ=255) tGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTg > 2:4797776/1‑150 (MQ=255) accgaccgCCAGATAGGAATTCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGcc > 2:3194959/1‑150 (MQ=255) accgaccgCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGcc < 2:857931/150‑1 (MQ=255) ccgaccgCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCg < 1:4257258/150‑1 (MQ=255) ccgaccgCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCg > 2:1732470/1‑150 (MQ=255) gaccgCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCgag < 2:569612/150‑1 (MQ=255) gaccgCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCgag > 2:4820369/1‑150 (MQ=255) | CATCCATGCCTTCTGAAGGCTTGATCGAGATACCGCCGGAGTCGAAGGTTAAACCTTTACCCACCAGCACGATTGGGCGTGCATCTTCCGACGCGTTGCCTTTGTACTCAATCACCGACATCAGCGATTCGTTTTGCGAACCCTGACCGACCGCCAGATAGGAATGCATCCCCAGCTCTTTCATCTGCTGTTCGCCGATAACGCGGGTGATGACATTCTTGCTGTAGCTGTCAGCCAGCTGGCGCGCTTGTGAAGCGAGGTAAGCGGCGTTACAGATATTCGGCGGCATATTGCCGAGA > CP009273/4474904‑4475202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |