Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | ACB122 | 1,115,444 | 0 | T | G | 27.5% | 112.8 / 11.2 | 69 | L242R (CTT→CGT) | lptG | Lipopolysaccharide export system permeaseprotein LptG |
Reads supporting (aligned to +/- strand): ref base T (21/29); new base G (19/0); total (40/29) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.74e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
CACTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAACGGCGGCCCTGGTGCTGATGGCGATTTCG > ACB122/1115308‑1115580 | cACTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCt < 6:410747/137‑1 (MQ=255) aCTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCtt > 5:343787/1‑137 (MQ=255) aCTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCtt > 5:93067/1‑137 (MQ=255) aCTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCtt > 7:58063/1‑137 (MQ=255) gCCGATCTGCGTACCACCTACTTCCGCGGCGACCACACCTAGGTGGTCAACGCGACGGAGGCCCGCTGGGATGTTTCGCTCACGAGAGATCTGCTCAATACCGTGATCCTCGCGCGGGAGTCGCGTTAGA‑tgagccg > 6:364928/1‑131 (MQ=255) gcGATTTGGGTACCTCCTACTTCCGGGGCGACCACTGCGAGGTTGTCTACGCTGCGGAGGAGCGCTGGGTTGTTTCGCTAACGCCATAACTTCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCggg < 5:123417/136‑1 (MQ=255) ccGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGGCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCggg < 3:200455/137‑1 (MQ=255) ccGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCggg < 2:41158/137‑1 (MQ=255) ggtgCGTACCACCTACTTCCGCGGCGACCACCCCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGgtgt < 5:449685/136‑1 (MQ=255) tgCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGCCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTgg < 8:337024/137‑1 (MQ=255) gCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTggg < 2:39541/137‑1 (MQ=255) gCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTggg < 5:439416/137‑1 (MQ=255) ccaccTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTAc < 5:184391/137‑1 (MQ=255) accTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑tt < 2:177820/117‑1 (MQ=255) accTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTGTGGA‑tt > 1:177820/1‑117 (MQ=255) cTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTTCCGGGTTGTGGGGTTACATcc > 8:244972/1‑137 (MQ=255) tACTTCCGCGGCGACCACACCGCGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCa < 1:250475/137‑1 (MQ=255) tCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTGTGGC‑ATAACGGGTTTTTGGATTAAAAGCactaa > 2:264741/1‑136 (MQ=255) tCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGA‑TTTACGGGTTGTGGGGTTTAATCCactac > 7:26137/1‑137 (MQ=255) tCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTACCGGGTTGTGGGATTAAATGCcctac > 4:318257/1‑137 (MQ=255) cgcgGCGACCACACCGAGGTGGTGAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACtt < 5:230672/137‑1 (MQ=255) gcggcgACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGA‑TTACCGGGTTGTGGGATTACATCCACGACATg > 6:201929/1‑137 (MQ=255) cgACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGTTTAAATCCACTAATTGTCTg > 7:239544/1‑137 (MQ=255) acacCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTGGA‑TTAACGGGTTGTGGGATTACATCCACTCCTTGTCTGATCAg > 8:79038/1‑137 (MQ=255) acacCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTGGA‑TTAAACGGTTGTGGGGTTTGATCACCTACTtgtgtggtaat > 1:127977/1‑132 (MQ=255) acacCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAg < 2:422562/137‑1 (MQ=255) aGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGA‑TTTACGGGTTGTTGGTTTTAATCCACTACTTTTCTGAGAAGGGCCTg > 2:91364/1‑137 (MQ=255) tggtCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGA‑TTTCCGGGTTGTGGGTTTTAATCCACAACGTGTGGGATAATGGCCGGaca > 6:54588/1‑135 (MQ=255) ggtCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCCGGTTTTGGGATTAAATACACTACGTGTGTGATCACGGCCTGaaca > 5:448915/1‑137 (MQ=255) tCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGaacaac > 6:84047/1‑137 (MQ=255) tCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTAACGGGTTGTGGGTTTTAAAACACTAAATTTCTGATAACGGGCTGaaacac > 4:305439/1‑133 (MQ=255) aaCGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTAACGCGTTGTGGGATTAAATACAATAATAGTCTGATCATGGCCTGAAAAAATc > 8:134119/1‑137 (MQ=255) gcCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGG‑TTACCGGGTTGTGGGGTTTAATACACTACTTGTGTGATCAGGGCCTGGAAAACTCCCGcg > 3:276868/1‑136 (MQ=255) tGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCCCTACTTGTATGATAAGGGGCTGAACAACTCCCGCTACTGGCTGGGGtt > 4:123603/1‑137 (MQ=255) tGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAATCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTActgg < 4:72418/129‑1 (MQ=255) tGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAATCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTActgg > 3:72418/1‑129 (MQ=255) ggATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCt > 2:31443/1‑137 (MQ=255) tGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGa < 4:263280/137‑1 (MQ=255) aCGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCGTTGGC‑TTTCCGGGTTGTGGGATTAAATCCACTAATTTTCTGATAAGGGGCTGAACAACTCCCCCTAATGGCGGGCGTTCTGGACCAAGGtgct > 6:396531/1‑137 (MQ=255) gCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGtgctgc < 3:79554/137‑1 (MQ=255) ccAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCa < 6:343787/137‑1 (MQ=255) ccAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCa < 1:91364/137‑1 (MQ=255) ccAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCa < 5:84047/137‑1 (MQ=255) cAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAg < 7:376909/137‑1 (MQ=255) cTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGt < 6:93067/137‑1 (MQ=255) cTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGt < 8:58063/137‑1 (MQ=255) aaTACCGTGTTCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGTATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAc < 5:230141/137‑1 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTTGA‑TTACCCGGGTTTGGGATTAAAAACACATAATGTCTGTAAAGGGCCTGCAACACTCCCGCTACTGGGGGGCCGTCTTGACCAAGTTGGGTCAGCCCCTGGTaaa > 4:309056/1‑136 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTGGA‑TTACCGGGTTGTTGGATTTCATACCCTACTTGTCTGATAAGGGGCTGAACAAATCCCGCTACTGGCTGGGGTTATGGACCAAGGTGCTGCCCCCGCTGGttaa > 8:288264/1‑134 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTGGA‑TTAACGGGTTGTGGGATTACATCCACTACTTGTGTGATAAGGGCCTGAACAACAACCGCTACTGGCTGGCGTTGTGGACCAAGGTGCTTCAGCCGATGGTAAc > 4:339616/1‑137 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTGGA‑TTAACGGGTTGTGGGATTACATCCACTACTTGTCTGATCATGGGCTGCACAAATACCGCGACTGGCTGGCGGTCTGGACCAAGGTGGTGCAGCCGAAGGTaaa > 4:170988/1‑136 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTAcc > 8:433945/1‑39 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTAcc < 7:433945/39‑1 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGTATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAc < 1:13340/137‑1 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAc < 1:240569/137‑1 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TCACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTaaa > 6:66455/1‑136 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTTTAGA‑TTACCGGGGTGTGTGCTTAACTACACTAAGAGTCTGATCAGTGCCAGTAAAACTCCCGCTACATGCAGGAGATGTGTACCAACGTGCTGGAGCGGAttctcac > 8:350857/1‑131 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCTGTGGA‑TTACCGGGTTTTGGGTTTACATACAATAATTGTCTGATCAGGGCCGGAACAACTACCCCGACTGGCTGGCGTTATGGGCCCACGGGCGGCAGCCGCTGGTAAc > 2:376328/1‑137 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCGTTGGT‑TTAACGGGGTGTGGGGTTTAATACCCTACATGTGTGATAAGGGCCTGAACAACACCCCCCACTGGCGGGCGTGGTGGTCCCAGTTGCGTCACCCGCTgggtaa > 6:251759/1‑133 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCGTTGGA‑TTACCGGGTTGTGGGATTACATCCAAAACATGTCTGCACAGGGCCTGAACAACTCCCGCTACTGGCTGGCGGTCTGGCCCAAGGTGCTGCAGCCGCTGGTaaa > 8:99911/1‑136 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTTACGGGTTGTTGGTTTTCATACACAACTTGTGTGATCAGGGCCTGAACAAATACCCCTACTGGCTGGCGGTCTGGACCAAGGTGCTGCAGCCGCTGGTaaa > 4:79554/1‑136 (MQ=255) aaTACCGTGATCCTCGCGCCGGAGTCGCGGTCGA‑TTACCCGGTTGTGGGATTAGATCCCCGAATTTTCGGAAAACGGCCAGAACAACACCCCCAACTGGCAGGCGGGCTGGACCCAGGTGCTGCAGCCGAGGGTAAc > 6:161756/1‑137 (MQ=255) tACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGTATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAcgg < 6:103778/137‑1 (MQ=255) ccGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAcggcg < 3:214256/137‑1 (MQ=255) ccGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAAcggcg < 1:439907/137‑1 (MQ=255) cGTGATCCTCGCGCCGGAGTCGCTTTGGT‑TTTACGGGTTTTGGGTTTTAATCAAAGAATTTTATGTTAATGGCCGGAAAAACACCCGCGACTGGCTTGGGTTGTTGGCCAAGGTGCTGAAGACGATGGTTAaggcgg > 4:398/1‑137 (MQ=255) cGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTTCCGGGTTTTTGGATTACATAAAATAATTGTATGATAAGGGGCTGCACAAAAACCGCAACATGCGGGCGTTGTTGACCAAGGTGCTGCACCCGATGGTAAaggcgg > 8:52909/1‑137 (MQ=255) cGTGATCCTCGCGCCGGAGTCGCGTTCGA‑TTAACGGGTTGTGGGATTAAAAACAAAAATTTTCTGAAAAAGGCCTGAAAAAAAACCCCAACAGGCTGGCCTTCAGGACCAAGGTGCTGCAGCCGATGGTAAacgcgg > 4:202912/1‑137 (MQ=255) tCCTCGCGCCGGAGTCGCTTTCGA‑TTAACCGGTTGTGGGGTTACATCCACTACATGTCTGATAAGGGCCTGAACAACAACCGCTACAGGATGGCGGTATGGACCAACGTGCTGCAGCCCATGGTAACCGCGGcccag > 6:427336/1‑135 (MQ=255) tCCTCGCGCCGGAGTCGCGTTGGATTTGCCGGGTT‑TGGGGTTTCATACCCGAATTGTGTGTTCACGGGCGGGACAAAGCCCCCGACTGGCTGGGGGTGTGGGCCAAGGTGCTGCAGCCGCTGGTAACCGGGGcccgg > 4:38810/1‑135 (MQ=255) tCCTCGCGCCGGAGTCGCGTTGGA‑TTACCGGGTTGTGGGCTTACATCCACGACTTGTCTGATCAGGGCCTGAACAACTCCCGCGACTGGCTGGCGGTCTGGCCCAAGGTGCTGCCGCCGCTGGTAACGGCGGcccgg > 2:242794/1‑135 (MQ=255) tCCTCGCGCCGGAGTCGCGTTGGA‑TTACCGGGGTGTGGGGTTTCATCCACTACTTGTGGGGTGAGGGGCTGAACAACTCCCGCGACGGGCGGGCGGTGTGGGCCAAGGTGCTGCCGCCGCTGGTAACGGCGGcccgg > 4:364634/1‑135 (MQ=255) aGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAACGGCGGCCCTGGTGCTGATGGCg < 8:26137/137‑1 (MQ=255) tttCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAACGGCGGCCCTGGTGCTGATGGCGATTTCg < 3:202912/137‑1 (MQ=255) | CACTGGCTGCTCGCCGATGTGCGTACCACCTACTTCCGCGGCGACCACACCGAGGTGGTCAACGCGCCGGAGGAGCGCTGGGATGTTTCGCTCACGCCAGAACTGCTCAATACCGTGATCCTCGCGCCGGAGTCGCTTTCGA‑TTACCGGGTTGTGGGATTACATCCACTACTTGTCTGATCAGGGCCTGAACAACTCCCGCTACTGGCTGGCGTTCTGGACCAAGGTGCTGCAGCCGATGGTAACGGCGGCCCTGGTGCTGATGGCGATTTCG > ACB122/1115308‑1115580 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |