Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	ACB122	5809511	5809738	228	20 [18]	[19] 21	[pilT]	[pilT]

AGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCC  >  ACB122/5809604‑5809875                                                                                                                                        |                                                                                                                                         aGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGc                                                                                                                                         <  1:284413/137‑1 (MQ=255) aGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGc                                                                                                                                         <  3:135879/137‑1 (MQ=255) aGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCCCCCTTCATCCCTGAAGAAACATGCGCCCACCCCCCCGCCCGCACCCGGTTTCGCACCGCCggg                                                                                                                                         >  1:298320/1‑136 (MQ=255)          tCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTACATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAATACAACAGCGCCAACCGCCCCTCACCCACCACGTTACGCACCCCCCGCGACGccacc                                                                                                                                >  7:106098/1‑137 (MQ=255)                        cTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCGGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCgcgc                                                                                                                  <  2:294227/137‑1 (MQ=255)                          cAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGcgccg                                                                                                                <  1:222942/137‑1 (MQ=255)                           aGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCGGCATCACAGTATACAACTGCGCCAACCGCCCCGCCCGCACCAGGGTAAGCCCCCCCCGCGGCGCCCCCAGCCCATACCCcgcccc                                                                                                               >  2:222942/1‑135 (MQ=255)                                ccGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCAccc                                                                                                          <  8:70793/137‑1 (MQ=255)                                ccGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCAccc                                                                                                          <  1:78294/137‑1 (MQ=255)                                          cccTCCATCGTCAGCATCCCCTCCCCCGCCCCGCCCGGCCTCACAGAACTCCACTGCGCCAAACCCCCCGCCCGACCCCGGGTTAGCCCCCCCCGCGGCGCCCCCCACCCGTCcccccccccccccccccccccccc                                                                                                >  6:163219/1‑137 (MQ=255)                                              ccATCGTCAGCATCCCCTCCCCCGCCCCCCCCTGGATCACTGAAGACAACAGCGCCCACCGCCCCACCCCAACCAGGTTACGCACCGCCGGCGTCGCCACCACCACTTCCCCCGCCGCCCCCCCCCCAccccccaac                                                                                            >  1:27462/1‑133 (MQ=255)                                               cATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTAcgc                                                                                           <  1:54898/137‑1 (MQ=255)                                                   gTCAGCATCCCCTCCGCCGCCCCTCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCt                                                                                       <  1:349669/137‑1 (MQ=255)                                                                 cgccgcCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTgcg                                                                         <  5:163219/137‑1 (MQ=255)                                                                                            cAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCa                                              <  7:314347/137‑1 (MQ=255)                                                                                                  cgcCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCCCCCGCCCCCCCCCAACCCGCCGGCCCCGCCCCCGCGCCACCCCCCCGCGCACCCCCACGGCCACCAACg                                        >  5:353758/1‑137 (MQ=255)                                                                                                     cAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCCCCCCCCCCCAACGCGCCTGACCCGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATAGccc                                     >  8:5901/1‑137 (MQ=255)                                                                                                         cGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCAc                                 <  5:121671/137‑1 (MQ=255)                                                                                                                             aCGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCATCGgcag             >  7:50856/1‑137 (MQ=255)                                                                                                                                        gCGTCGCCACCAGCACTTCCCGCGCCGCCCCCCGCCCACCCCCAAAGCGCCAGCCCAGCACCAGCGCGCCCACCCCGCGCACCGACACGGCCCGCATCGCCCGCACCAACGGCGTTTACTCGGCAGGAAACACCTcc  >  5:358059/1‑137 (MQ=255)                                                                                                                                        gCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTcc  <  7:322613/137‑1 (MQ=255)                                                                                                                                        |                                                                                                                                         AGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGCGCCAACCGCCCCTCCCGAACCAGGTTACGCACCGCCGGCGTCGCCACCAGCACTTCCCGCGCCGCCACCCGCCCACCCCCTACGCGCCTGACCAGCACCTGCGCGACCACCAGGCGCAGCGACTCGGCCAGCATCGCCCGCACCAACGGCTTTTCCTCGGCAGCAAACACCTCC  >  ACB122/5809604‑5809875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑