Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	ACB122	4,963,095	Δ12,336 bp		[CJ019_04659]–[flgE]	[CJ019_04659], fabH, CJ019_04661, CJ019_04662, CJ019_04663, flgI, flgH, flgG, flgF, CJ019_04668, [flgE]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	ACB122	4963095	4975430	12336	58 [0]	[0] 57	[CJ019_04659]–[flgE]	[CJ019_04659],fabH,CJ019_04661,CJ019_04662,CJ019_04663,flgI,flgH,flgG,flgF,CJ019_04668,[flgE]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB122	= 4963094	0 (0.000)	50 (0.940)	33/224	0.3	100%	coding (1114/2064 nt)	CJ019_04659	hypothetical protein
	?	ACB122	4975431 =	0 (0.000)					coding (489/1323 nt)	flgE	Flagellar hook protein FlgE

AGTTGAAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB122/4962947‑4963094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccgagttcagGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCC  >  ACB122/4975431‑4975560                                                                                                                                                                                                                                                                                        AGTTGAAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGG                                                                                                                                                 <  8:27288/135‑1    TGAAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAG                                                                                                                                              <  3:123034/135‑1    TGAAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGCCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAG                                                                                                                                              >  3:266378/1‑135      AAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGC                                                                                                                                             >  8:157520/1‑134              GCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAG                                                                                                                                    >  2:119144/1‑135              GCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAG                                                                                                                                    >  8:372328/1‑135              GCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAG                                                                                                                                    >  2:233490/1‑135                CATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGCCCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGGTCAGGT                                                                                                                                  >  3:229859/1‑135                CATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGT                                                                                                                                  >  1:327668/1‑135                CATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGT                                                                                                                                  >  3:239144/1‑135                CATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGT                                                                                                                                  >  1:45528/1‑135                CATTGATGCAGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGT                                                                                                                                  >  7:207316/1‑135                     ATGTCGATCGAAGCAGCCGACTCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTAAGTCGAAGCCGGCAGCCGAGTTCAGGTTGATC                                                                                                                             >  2:259155/1‑135                      TGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCT                                                                                                                            <  7:178891/135‑1                      TGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCT                                                                                                                            >  8:338510/1‑135                       GTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTT                                                                                                                           <  1:233490/135‑1                            TCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGG                                                                                                                      >  2:362373/1‑135                             CGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCA                                                                                                                                               <  4:269058/109‑1                             CGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCA                                                                                                                                               >  3:269058/1‑109                             CGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCAAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGACGGCAGCCGAGTTCAGGTTGATCTTCTAGG                                                                                                                      >  7:262359/1‑134                              GAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTG                                                                                                                    >  8:121614/1‑135                                      CGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCT                                                                                                            <  3:75217/135‑1                                                  GGTAGTCTGTGGCGCTATGGCAACACAACCTGCAGTCAGACCCAGGCCAGTCAAGGTCCCCGCCGTACCACCTCCGGCGACGCCGGCCGCCGAGTTCAGGTTTAGCTTCTCGGTGATGCGGCTGGTCGGCTTCGG                                                                                                <  4:1644/135‑1                                                  GGTAGGCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGGCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGGGAGGAGGCTGGTCGGCTTCGG                                                                                                <  7:190488/135‑1                                                              CGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTG                                                                                      >  5:135645/1‑133                                                               GCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGG                                                                                     <  6:135645/133‑1                                                                  ATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGGCGGCTTCGGCGTCAGGTTGGAAGTA                                                                                <  7:157520/135‑1                                                                                    GTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAG                                                                >  8:99375/1‑133                                                                                       AGACCCAGGCCAGTCAATGTACCCGCCGTACCACCTACGTCGAAGCCGGCTGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCGGGGCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGG                                                           <  5:349184/135‑1                                                                                         ACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGAT                                                         <  8:196727/135‑1                                                                                            CAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCC                                                      >  1:337597/1‑135                                                                                                  AGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGA                                                 >  7:124183/1‑134                                                                                                      AAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATC                                            >  6:304592/1‑135                                                                                                      AAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTC                                                              <  1:135864/117‑1                                                                                                      AAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTC                                                              >  2:135864/1‑117                                                                                                      AAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGACAGTCAGGATGCCCTGGATGATC                                            >  3:364583/1‑135                                                                                                               GCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCC                                   >  7:60458/1‑135                                                                                                                CAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCT                                  >  4:256023/1‑135                                                                                                                 AGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTC                                 <  1:56498/135‑1                                                                                                                 AGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTC                                 <  7:121614/135‑1                                                                                                                 AGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTC                                 <  8:207316/135‑1                                                                                                                 AGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTC                                                              >  7:253467/1‑106                                                                                                                 AGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTC                                                              <  8:253467/106‑1                                                                                                                      CACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCGGGTTGGAAGTATCGATCTGCTGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGc                            >  1:228679/1‑134                                                                                                                      CACCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGA                            >  5:208447/1‑135                                                                                                                        CCTACGTCGAAGCCGGCAGCCGAGTTCAGTTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACC                          <  1:362373/135‑1                                                                                                                        CCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACC                          <  3:193036/135‑1                                                                                                                        CCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACC                          <  3:195035/135‑1                                                                                                                        CCTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGGGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACC                          <  2:295244/135‑1                                                                                                                         CTACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCG                         <  2:327668/135‑1                                                                                                                           ACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGC                        >  8:135305/1‑134                                                                                                                           ACGTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGC                        >  8:34584/1‑134                                                                                                                             GTCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCA                       <  7:134368/133‑1                                                                                                                              TCGAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGTTCAGTCAGGATGCCCTGGATGATCTTGCCGTCATCGCCGACCGCATAA                    >  3:167503/1‑135                                                                                                                                GAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACC                  >  8:128189/1‑135                                                                                                                                GAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACC                  >  5:136357/1‑135                                                                                                                                GAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACC                  <  6:361986/135‑1                                                                                                                                GAAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAAC                   >  7:335429/1‑134                                                                                                                                 AAGCCGGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTTCCGTCCTCGCCGACCGCATAACCC                 >  2:212768/1‑135                                                                                                                                        CAGCCGAGTTCAGTTTGTCCTTCTCGGTGAGGAGGATGGGCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCATGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGT          <  5:129303/135‑1                                                                                                                                        CAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGT          <  3:57579/135‑1                                                                                                                                              AGTTCAGGTGGAGCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCAC    <  4:247710/135‑1                                                                                                                                                 TCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGTTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCC  <  7:135305/134‑1                                                                                                                                                 TCAGGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGCTCAGTCAGGATGCCCTGGATGATCTTGCAGTCCTCGCCGACCGCATAACGCTGCAGGTTGGCACCC  >  4:219498/1‑134                                                                                                                                                                                                                                                                                        AGTTGAAGGTAGTGCCATTGATGTCGATCGAAGCAGCCGACGCCAGACCGGTAGTCTGAGGCGCGATGGCAACAGAACCTGCAGTCAGACCCAGGCCAGTCAAGGTACCCGCAGTACCACCTACGTCGAAGCCGGCAGCCGAGTTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB122/4962947‑4963094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagccgagttcagGTTGATCTTCTCGGTGATGAGGCTGGTCGGCTTCGGCGTCAGGTTGGAAGTATCGATCTGCAGGTCAGTCAGGATGCCCTGGATGATCTTGCCGTCCTCGCCGACCGCATAACCCTGCAGGTTGGCACCC  >  ACB122/4975431‑4975560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.