| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB122 | 4,687,945 | A→G | 5.1% | intergenic (‑46/‑45) | CJ019_04426 ← / → yhaJ_2 | hypothetical protein/HTH‑type transcriptional regulator YhaJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB122 | 4,687,945 | 0 | A | G | 5.1% | 256.8 / 2.5 | 78 | intergenic (‑46/‑45) | CJ019_04426/yhaJ_2 | hypothetical protein/HTH‑type transcriptional regulator YhaJ |
| Reads supporting (aligned to +/- strand): ref base A (48/26); new base G (2/2); total (50/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCAGGCAGCAAGGCACTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGCCGTGT > ACB122/4687815‑4688078 | cGCCAGGCAGCAAGGCACTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCAGGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAAt > 5:327786/1‑135 (MQ=255) ccAGGCAGCAAGGCACTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAAttt < 1:164351/135‑1 (MQ=255) aGGCACTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATaa < 5:82572/135‑1 (MQ=255) aCTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAga < 1:217137/135‑1 (MQ=255) cTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGGTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAgat < 2:60214/135‑1 (MQ=255) ggCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcat < 8:178704/136‑1 (MQ=255) gCACCGTGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcat > 7:145177/1‑135 (MQ=255) gCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatca > 4:22288/1‑134 (MQ=255) gCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatca > 2:99307/1‑134 (MQ=255) gCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatca > 2:94088/1‑134 (MQ=255) gCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatca > 5:348214/1‑134 (MQ=255) cACCGAGGCTGAGCGGGTCGCTACTGCAGTGGTTGACATGCCACGCGGTTTGTCTTTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcatc < 5:184045/135‑1 (MQ=255) cGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcatca > 5:250828/1‑133 (MQ=255) gAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcatcatccg > 8:158954/1‑134 (MQ=255) gAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGAtcatcatca > 2:38590/1‑135 (MQ=255) gAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAg > 7:44194/1‑136 (MQ=255) gCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcat > 7:68319/1‑127 (MQ=255) gCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGatcat < 8:68319/127‑1 (MQ=255) gCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGt > 2:353497/1‑135 (MQ=255) gCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGt > 3:111864/1‑135 (MQ=255) cTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGtt < 1:184663/135‑1 (MQ=255) tGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTTATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTa > 7:242187/1‑136 (MQ=255) tGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGttt > 3:349203/1‑135 (MQ=255) gggTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGa < 2:372495/135‑1 (MQ=255) gggTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGa < 2:146119/135‑1 (MQ=255) gCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATgg > 7:117102/1‑136 (MQ=255) tCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCt > 5:391837/1‑134 (MQ=255) tGGGTGACATGCCACGCGGTTGGTCTGTGCACGCGTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCa > 1:163470/1‑135 (MQ=255) cgTGACATGCCACGCGGATGGTCTGTGCACGCTTTTCTCCGTTGAGGTGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCTATAATAGATGATCATCATCAGGGTTACGGACTATGGCCTTTAACAGc > 2:386322/2‑135 (MQ=255) gTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCg > 2:354972/1‑135 (MQ=255) gTGACATGCCACGCGCTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGAAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCg > 4:365516/1‑135 (MQ=255) gACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGAc > 3:366830/1‑135 (MQ=255) gACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGAc > 1:116256/1‑135 (MQ=255) aTGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTccc > 8:26676/1‑136 (MQ=255) gCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTg > 8:98040/1‑136 (MQ=255) aCGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGc > 7:86319/1‑135 (MQ=255) cgGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑t > 1:357029/1‑135 (MQ=255) tCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTc < 2:90374/135‑1 (MQ=255) tCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTc < 6:391837/135‑1 (MQ=255) tgCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTTATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt < 8:242187/136‑1 (MQ=255) gCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt < 2:65256/135‑1 (MQ=255) aCGCTTTTCTCCGTTGAGGGGACTTTCATGCAGGTGCATTAATGTTCATAATTTTTATCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTAAAAGAGACTCCATGGCGA‑TTTTCCTCGCGGttc > 4:255181/1‑133 (MQ=255) aCGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGc > 3:49200/1‑135 (MQ=255) aCGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGc > 3:29964/1‑135 (MQ=255) aCGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCt > 8:370897/1‑136 (MQ=255) gCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTc > 7:363898/1‑135 (MQ=255) cTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCg < 3:191383/135‑1 (MQ=255) ccGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCgg > 2:127786/1‑135 (MQ=255) ccGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCgg > 4:155544/1‑135 (MQ=255) ccGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACAAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCg > 4:321100/1‑134 (MQ=255) ggggACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTtc > 5:81549/1‑135 (MQ=255) cTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTGC‑Tccgc < 2:24237/135‑1 (MQ=255) ccTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑Tccgccgccg < 8:145177/136‑1 (MQ=255) ccTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑Tccgccgccg < 8:117102/136‑1 (MQ=255) aGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGccgccc > 4:201072/1‑134 (MQ=255) gTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGccgcccg > 6:211417/1‑133 (MQ=255) gTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCACTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGccgcccg > 2:69265/1‑133 (MQ=255) tGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCaa < 3:22288/135‑1 (MQ=255) tGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCaa < 1:99307/135‑1 (MQ=255) gctttAATGTACAAAATTTTTAGCAAAAAAAGATGATCATCAGCAGGTTTACTGACAAGGGCCTTTACCCGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAg < 6:245106/132‑1 (MQ=255) cATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGATTTTTCATGGCGTTGCTCGATG‑CGGCGCGTTCGTCccccgcc‑cccgcc > 8:120598/1‑131 (MQ=255) ttAATGTTCGTAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt > 7:298415/1‑95 (MQ=255) ttAATGTTCGTAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt > 7:303674/1‑95 (MQ=255) ttAATGTTCGTAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt < 8:303674/95‑1 (MQ=255) ttAATGTTCGTAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGt < 8:298415/95‑1 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTcc > 4:258623/1‑88 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTgg > 7:355572/1‑136 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTg > 4:284151/1‑135 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTg > 5:367417/1‑135 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTg > 4:129313/1‑135 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCGCGATTCCGGCTCGTTC‑TACGCCGCCCCCCGCAACCTg > 5:266449/1‑135 (MQ=255) ttAATGTTCATAATTTTTAGCAATAAAAGATCATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTcc < 3:258623/88‑1 (MQ=255) tAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑GTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTgg > 6:346793/1‑135 (MQ=255) aTGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCGCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGc < 6:24721/135‑1 (MQ=255) tGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGc < 4:366830/134‑1 (MQ=255) tGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGc < 4:366032/134‑1 (MQ=255) tGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGc < 4:349203/134‑1 (MQ=255) cATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCCCGGTGCTCGAAGCCCGCTAGTTC‑TCCGCCCCCGCCCCCCAGCTGGGCCctgt > 5:227145/1‑135 (MQ=255) | CGCCAGGCAGCAAGGCACTGTAGGCACCGAGGCTGAACGGGTCGCTACTCCAGTGGGTGACATGCCACGCGGTTGGTCTGTGCACGCTTTTCTCCGTTGAGGGGACTGTCCTGCAGGTGCATTAATGTTCATAATTTTTAGCAATAAAAGATGATCATCATCAGGTTTACTGACAATGGCCTTTACCAGCGACTCCCTGGCGA‑TTTTCCTCGCGGTGCTCGATGCCGGCTCGTTC‑TCCGCCGCCGCCCGCAAGCTGGGCCGTGT > ACB122/4687815‑4688078 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |