| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 2,171,211 | T→A | 9.1% | R130R (CGT→CGA) | CJ019_02060 → | IS1182 family transposase ISPpu16 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 2,171,211 | 0 | T | A | 9.1% | 454.7 / 3.6 | 152 | R130R (CGT→CGA) | CJ019_02060 | IS1182 family transposase ISPpu16 |
| Reads supporting (aligned to +/- strand): ref base T (76/60); new base A (2/13); total (78/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.04e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 157 total aligned reads displayed.
GAAGCTGAACGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGC > ACB143/2171077‑2171344 | gAAGCTGAACGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGt > 4:66802/1‑135 (MQ=255) aGCTGAACGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAc < 8:186184/136‑1 (MQ=255) cTGAACGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCAGTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCt > 7:161477/1‑136 (MQ=255) aaCGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCaa < 6:165166/136‑1 (MQ=255) aaCGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCaa < 2:57784/136‑1 (MQ=255) aaCGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCa < 8:254934/135‑1 (MQ=255) gCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCt > 3:105626/1‑136 (MQ=255) tggcGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTtc < 1:106681/133‑1 (MQ=255) ctaGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTACGCAAGGACATCGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTACCCTCATCCTTTTctct < 8:204873/134‑1 (MQ=255) cGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTctct > 1:12832/1‑136 (MQ=255) cGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTctct > 1:255956/1‑136 (MQ=255) cGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTctct > 3:34387/1‑136 (MQ=255) cGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGGTCGTGATCCTCTGCCGTAACCACAACCTTTTctct > 5:139889/1‑136 (MQ=255) gAGTTGATGTGGCTCTCAGGACGGCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTg < 5:220342/136‑1 (MQ=255) gAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTg < 7:77974/136‑1 (MQ=255) gAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTg < 3:82994/136‑1 (MQ=255) gAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTg < 2:60686/136‑1 (MQ=255) gTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAg > 7:123875/1‑136 (MQ=255) tgGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTctct > 7:203135/1‑126 (MQ=255) tgGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTctct < 8:203135/126‑1 (MQ=255) gCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCAtt > 7:262986/1‑136 (MQ=255) gCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCAtt > 6:233043/1‑136 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGCCAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATGCGCTGCCGTAACCTCAAACTTTTATCTGAGTCGATGATTG‑cc > 2:148642/1‑136 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAc < 2:3053/106‑1 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAc > 1:7807/1‑106 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAc < 2:7807/106‑1 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAAc > 1:3053/1‑106 (MQ=255) cacaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑c > 1:152549/1‑135 (MQ=255) acaGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCa > 7:202529/1‑136 (MQ=255) aGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGGAAAGCCATTCGTAGCGTCTGCAGGCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATc < 5:464/136‑1 (MQ=255) ggACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCg < 2:286359/136‑1 (MQ=255) ggACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCg < 4:242512/136‑1 (MQ=255) gTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACgg > 1:15689/1‑136 (MQ=255) tatGGCTCAGGATTTCAAAACCATCTCCGACTTTCTAAATTTCAACGGTAAAGCCATTCGTAGCGTCTGACGTAAGTTAGTGATCCTCTGCAGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACTgc < 2:67736/134‑1 (MQ=255) tCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGgc < 2:245604/136‑1 (MQ=255) tCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGgc < 3:99741/136‑1 (MQ=255) tCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGgc < 1:37064/136‑1 (MQ=255) tCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGgc < 1:138854/136‑1 (MQ=255) cTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATGCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATGATTG‑ACATCGCCgg > 8:266197/1‑134 (MQ=255) cTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACgg > 3:29448/1‑134 (MQ=255) tGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGgcag > 7:97200/1‑136 (MQ=255) tGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAAACTTTTCTCTGAGTCGATCATTG‑CCATCGACGgcag > 6:87928/1‑136 (MQ=255) cGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGt < 7:265765/135‑1 (MQ=255) cGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGt < 7:161037/135‑1 (MQ=255) gATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCa < 8:153257/136‑1 (MQ=255) gATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCa < 4:257639/136‑1 (MQ=255) tCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACaa > 8:238579/1‑136 (MQ=255) gCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATc > 3:183407/1‑136 (MQ=255) ccGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATcg > 4:281511/1‑136 (MQ=255) acGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGAAACCTAAACATTTTCACTGATTCGATAATTG‑CCATCGACTGCAGCAAGTTCAAA‑GCAATGAACAAtac > 6:4365/2‑134 (MQ=255) cTTCCGAAAGCACAACGTAAAACCCATTCGTAGCTGCTGCCTTCAGTTCGTTATCCTCTGCCTAAACCACAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAC‑GCAGTCAACAAGCGCGa < 8:274384/135‑1 (MQ=255) ccAAGGACACCGGAAAAGCCATTCGTAGCGTCTGCCGGCTGTTCGTTATCCTCTGCCTTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGAGGGCAGCAAGTTCAAA‑GCAGTTAACAATCGCGACCGTa < 6:275806/134‑1 (MQ=255) ggACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCTATCATTG‑CCATCGACGGCAGAAAGTTAAAA‑GCAGTGAACAATCGCGACCGTAACTTc < 7:217998/136‑1 (MQ=255) ggACAACGGTAAAGCAATTCGTAGCGTCTGCCGTCAGTTGGTGATCCTCTGCCGTAACCTAAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTTAACAATCGCGACCGTAACTTc < 7:213908/136‑1 (MQ=255) ggAAAACGTTAAAGCCATTCGTCGCGGCTGCCGTCAGTTGGTGATCCTCTGCCGTAACCTCACCATTTTCTCTGATTCTATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTCAAAAATCGCGACCGTAACTTc < 8:154423/136‑1 (MQ=255) ttaaaaGCCATTCTTAGCTTCTGCAGTTTGTGCGTTATCTTAGCCCCAAACCAAAACCTTTTATCTTAGCCTATTATTG‑CCTTCGACGGCTG‑AATTTCAAATGCTGTGAACAATCGCGACCGTAACTTCACCCAgg < 2:32731/133‑1 (MQ=255) gtaaaaGCATTTCGTAGCGTCTGCCTTCTGTTCGTTATCCTCTGCCTAAACCTAAACTTTTTCTGTGCGTCTATCATTG‑CCATCGAGGGAAGCAAGTTCAAC‑GCAGTTAACAAGCGCGACCGTAACTTCACCCAgg < 8:68002/133‑1 (MQ=255) gtaaaaCCCATTCTTCGCGTCTGCCGTCATTTCGTGATCCTCTGCCGAAACCTAAACCTTTTCTCTGAGTCTATCATTC‑CAATCGACGGCAGAATTTTCAAA‑GCTGTAAAAAACCGCGACCGTAACTTCACCCAgg < 2:18784/133‑1 (MQ=255) ccATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATAGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGt > 1:245257/1‑136 (MQ=255) cATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGt > 3:291990/1‑135 (MQ=255) gTAGTGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 7:134447/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCaa < 4:55808/43‑1 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCCACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGACAAGGTGAAGGc > 5:120436/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGCACAATCGCGACCGTAACTTCACCCCGGCCAAGGTGAAGGc > 2:111223/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCCGGCCAAGGTGAAGGc > 2:108628/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGc > 7:30053/1‑136 (MQ=255) gTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAAAAATCGCGCCCCTAACTTCCCCCAGGCCAAGGTGAAGGc > 2:67447/1‑136 (MQ=255) tAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTtc < 7:103998/49‑1 (MQ=255) tAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTGCAAA‑GCAGTGAACAATCGCGACCGTAACTTCCCCCAGGCCAAGGTGAAGGcc > 3:21566/1‑136 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGCAGGccc > 8:246045/1‑136 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGccc > 8:88579/1‑136 (MQ=255) aGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTATCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAAAAATCGCGCCCGTAACTTCACCCAGGCCAAGGTGAAGGccc > 1:20438/1‑136 (MQ=255) gggTCGGCCTTCAGTTCGTCCACCTCTGCCGAAACCACAACCTTTTCGCTCTGCCCACAATGG‑CCACCGCCGCCAGCAAGTAAAAC‑GCAGTAAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGccc < 4:9552/133‑1 (MQ=255) gCGTCTGACGTCCTTTCGTGATCGAGTGCCGTACCCTCAACCTTTTCTCTGTGCCTATCATTG‑CCATCTACGGCAGAAAGTTCAAA‑GCAGTCAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGccc < 6:137429/135‑1 (MQ=255) tcccGTCAGTTCGTCAGCATGTCCCTAAACCTAAACTTTTTCTCTGTGTCTA‑AATTGCCCAGCCCGGGCATCAATTAAAAA‑GCCGTAAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgc < 2:171779/134‑1 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTT‑AAATCGACGGCAGCAAGTTCAAA‑CCAGTGAACAAACGCGACCGTAACTTCACCCACGCCAAGGTTAAGGCCCGCATgaag > 1:102292/1‑135 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGCCGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCACGGTGAAGGCCCGCATgcag > 6:163916/1‑135 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCACGTTCAAA‑GCAGTGAACAATCGCGCCCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgccg > 8:67110/1‑133 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgcag > 4:168280/1‑135 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgcag > 5:283348/1‑135 (MQ=255) cGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATAGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTAACCCAGGCCAAGGTGAAGGCCCGCATgcag > 8:125555/1‑135 (MQ=255) tCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATgcagca > 5:271319/1‑135 (MQ=255) tgcGTGAGCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGTCGGCAGCAAGTTCAAC‑GCAGTCAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCg < 2:191056/134‑1 (MQ=255) ggTGAGCCTCTGCCGAACCCTAAACTTTTTTTCTGTGTGTATAATTC‑CCATCGAGGGCAGAAATTAAAAC‑GAAGTCAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 5:88086/134‑1 (MQ=255) cGTGATCCTCTGCCGTAACCTAAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAC‑CCAGTCAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCga < 7:26899/135‑1 (MQ=255) gTGATCCTCTGCCGTAACCTCAACATTTTCTCTGAGTCGATCATTT‑CCATCGACGGCAGCAAGTTCAAA‑TCAGTGAACAATCGCGACCGTAACTTCCCCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgag > 1:66584/1‑135 (MQ=255) tCCGCTGCCTTAACATCAAATTTTTCTGTGAGTGGATCATTC‑CCATCTACGGCAGAATTTACAAC‑CCTTTTAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcaga < 4:142153/135‑1 (MQ=255) ctctGCCTTACACACACCCTTTTCTCTGAGTCTATCATTG‑CCATCGCGGGCAGCAAGATAACA‑CACGCCAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcagagca < 6:25316/136‑1 (MQ=255) ctctGCCTTAACCTCAACCTTTTCTCTTAGTCGTTCTTTC‑CCATCTCCGGCTGCATGTTCAAT‑CCAGTCAACATTCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCgagcagagca < 7:157472/136‑1 (MQ=255) gCCGCACCCTCACCCTTTGCTCTGAGGCTATCATTG‑CCATCGACGCCAGCAAGTTCAAA‑GACGTCAACAACCGCGACCGTAACTTCACCCAGGCCGAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 6:43775/136‑1 (MQ=255) gCCGAAACCTCAACCTTTTCTCTGATTCGATATTTG‑CCATCCACGGCAGCAAGTCAAAC‑GACGTCAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:208941/136‑1 (MQ=255) cccttAACCTCAACCTTTTCTCTTAGTCGATCATGC‑CCATCCACGGCAGCAA‑TTCAAACCCAGTCAAAAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 3:66802/132‑1 (MQ=255) ccttAACATCAACCTTTTCTCTGAGTCTATCATTC‑CAATCGACGGCACAAAGTTCAAA‑GAATTCAAAAAACGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 3:233041/132‑1 (MQ=255) ccctAACCTCAACATTTTCTCTGAGTCGATAATTC‑CCAGCGAGGGCAGCAATTTCAAA‑CCAGTTAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 7:35922/132‑1 (MQ=255) ccGTAACCTCACCCTTTGCTCTGAGTCTATCATTC‑CCTGCGCGGGCAGCAATTGAAAA‑GCAGTCAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 1:79545/135‑1 (MQ=255) ccGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAC‑GCAGTCAACAAGCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 8:177882/135‑1 (MQ=255) ccGTAACCTAAACCTTTTCTCTGAGCCTATAATTG‑CCATCGACGGCAGAAATTTAAAA‑GCAGTAAAAAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:197819/135‑1 (MQ=255) ccGAAACCTCAACTTTTTCTCTGCGTCTATATTTG‑CCAGCGAGGGCAGCATTTTCAAA‑CCAGTCAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 5:233043/135‑1 (MQ=255) ccGAAACCTAAACCTTTTTTCTTTGTCGATCTTTC‑CCATGCCCGGCAGCAAGTTCAAA‑CCTTTCAACAACCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGa < 4:105626/135‑1 (MQ=255) cGTAACCTCAACCTTTTATCTGAGTCGATCATTG‑CCATCGCCGGCACCAAGTTCAAA‑GCATTGAAAAATCGCGACCGTAACATAACACAGGCCAATGTGAAGTCCCGCATTCATCAAATCGAACAGAGCAGTGAgc > 2:241525/1‑136 (MQ=255) | GAAGCTGAACGCAATGTCGAGTTGATGTGGCTCACAGGACGTCTGGCTCCGGATTTCAAAACCATCGCCGACTTTCGCAAGGACAACGGTAAAGCCATTCGTAGCGTCTGCCGTCAGTTCGTGATCCTCTGCCGTAACCTCAACCTTTTCTCTGAGTCGATCATTG‑CCATCGACGGCAGCAAGTTCAAA‑GCAGTGAACAATCGCGACCGTAACTTCACCCAGGCCAAGGTGAAGGCCCGCATGCAGCAAATCGAGCAGAGCATTGAGC > ACB143/2171077‑2171344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |