| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | ACB143 | 4,788,936 | A→C | 14.7% | V230G (GTG→GGG) | dat ← | Diaminobutyrate‑‑2‑oxoglutarateaminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 4,788,936 | 0 | A | C | 14.7% | 201.9 / 3.7 | 120 | V230G (GTG→GGG) | dat | Diaminobutyrate‑‑2‑oxoglutarateaminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (64/34); new base C (15/7); total (79/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GGATCTCGTCGACGATCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCGTTGCCGAGC > ACB143/4788802‑4789067 | ggATCTCGTCGACGATCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCAc > 6:29650/1‑136 (MQ=255) ctcGTCGACGATCAACGCCACGCCCGCCTGCTCGCTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACATCGAGGATCACGGCGGCGGGCAGCGGCAcgccg > 5:282166/1‑136 (MQ=255) cgacgaTCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCCGCGGCACCCCGCTTTc > 3:50610/1‑136 (MQ=255) cgacgaTCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTc > 5:52831/1‑136 (MQ=255) gacgaTCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTcc < 3:121503/136‑1 (MQ=255) gacgaTCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTcc > 2:86607/1‑136 (MQ=255) aTCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGAt > 7:74531/1‑136 (MQ=255) gccacgccCGCCTGCGCGGTAATGCGCCGCACGCCCTTGAGCAATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGTATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGagca < 2:59930/136‑1 (MQ=255) cgccTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGttt > 4:118874/1‑136 (MQ=255) cggggcGGTATTGCGCCCCCCGCCCTTTAGCATTTGTTTGCCGGCCGGAACCACCCCG‑CCCTCACCGTCC‑ACCACTTCGTGTTTCACGGGGGGGGGCTGGGGCAGGCCGCTTTCCGGATCGAGCAGCAGGTTTTcc < 4:279451/131‑1 (MQ=255) tGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCCCTTTCCGGAGAGCGCAGCAGGtttta > 6:174266/1‑133 (MQ=255) gCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTCCGGATCGAGCCGCAGGTTTTGCAg > 4:510/1‑136 (MQ=255) aaTGCGCCGCACGCCGTTGAGCATTTCGATGTCGTCCGGACCCCCCCCG‑CCCTCACCCTGC‑CCCAATTGGATGATCACGGCGGGGGGCCGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGc < 2:71878/136‑1 (MQ=255) ttGCGCGCCACGCCCTTCAGCAATTAGATGTCGGACGTAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCTAGGATCACGGCGGCGGGCTGCGGCACGCCGCTTTCCGGATCGAGCATCAGGTTTTCCAGGTAATGc < 6:266228/134‑1 (MQ=255) aTGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGc < 3:226574/135‑1 (MQ=255) tGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCCGCAGGTTTTCCAGGTAATGCAg > 6:102752/1‑136 (MQ=255) cgcACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTCCGGATCGAGCAGCAGGTTTTCCCGGTAATGCAGG‑TTgg > 8:211535/1‑136 (MQ=255) cgcACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTgg > 5:285151/1‑136 (MQ=255) cgcACGCCCTTGAGCCATTCGATGGCGGCCGGACCCACCCCG‑CCCTCCCCCTGC‑ACCCATTCGAGGATCACGGCGGGGGGCTGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTgg < 1:223275/136‑1 (MQ=255) gcACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCCGCGGCCCGCCGCGTTCCGGCGAGCGCAGCAGGTTTTGCAGGTAATGCAGG‑TTGGc > 5:261047/1‑136 (MQ=255) aCGCCCTTGAGCCATTCGATGTCGGCCGGAACCACACAG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCGTTCCGGCTCGAGCAGCAGGTTTTCCAGGTAAAGCAGG‑TTGGCCt > 2:271785/1‑136 (MQ=255) cccccTGGAGCCATTCGAGGGCGGCCGCAACCACCCCC‑CCCTCCCCCTGC‑CCCACTTCGCGGAGCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCtt < 7:257370/134‑1 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCtt > 5:52386/1‑135 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCtt > 5:212106/1‑135 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCtt > 5:124553/1‑135 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTg > 1:157225/1‑136 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGCATCACGGCGGCGGGCAGCGGCACGCCGCGTTACGGATAGCGCCGCATGTTTTACAGGTAATGGACG‑TTGGCCtt > 3:43954/1‑135 (MQ=255) gCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑ACCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTACAGGTAATGCAGG‑TTGGCCtt > 6:53527/1‑135 (MQ=255) tGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGAcccc > 2:164188/1‑136 (MQ=255) gAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGAccc < 6:285151/134‑1 (MQ=255) gCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTACTGATGGAGCAGCAGGTTTTACAGGTAATTCAGG‑TTGGCCATTACCCCGGc > 2:154782/1‑136 (MQ=255) ccATTCGAGTTGGGCCGTAACAACCCCG‑CCATC‑CCCGGCAACCATTTCTCGGATCCCGGCGGGGGGCAGCGGCCCGCGGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGcc < 2:116324/136‑1 (MQ=255) ccATACGATGGGGGCCGTAACCACCCCG‑CCCTCACCCTGC‑ACAAGTGCTAGTATCCCGGGGGCGGGCCGCGCCACCCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGcc < 2:235704/136‑1 (MQ=255) gATGTCGGCCGGAACCCCCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg < 8:272743/136‑1 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCCGCGGCACGCCGGGTTCCGGATCGAGCAGCAGGTTTTGCAGGGAATGCAGGTTTGGCTTTCACCCC‑GCCTCACCg > 7:243374/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 3:16961/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTGCGGATCGAGCCGCAGGGTTTACAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 4:47889/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTCCGGATCGAGCAGCAGGTTTTGCAGGTAATTCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 2:125226/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 1:26335/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGCTCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 4:103577/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 7:213753/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 1:193103/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 1:209894/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 1:44204/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCGTTCCGGATCGAGCAGCAGGTTTTACAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 3:231713/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCCCGTTCCGGAGACAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCACACCg > 6:32660/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACCCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGCCCCCCGCCACACCg > 2:109007/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACCCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCg > 5:120067/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACCCCGCGTTGCGGCTCGAGCAGCAGGGTTTGCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCGCCCCg > 3:196149/1‑136 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGCCACGCCGCTTACCGGATCGAACAGCACGTTTTACACGTAATGCAGG‑TTGGCCATGACCCCCGCCTCAccc > 7:149933/1‑135 (MQ=255) gATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACGTCGAGGCTCACGGCGGCGGGCAGCGGCACGCCGCTTTCGGGATCGAGCCGCAGGTTTTAGAGGGAATGCAGG‑TTGGGCTTGACCCCGGCCTCACCg > 6:199332/1‑136 (MQ=255) ggAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCCGCGGCACGCCGCGTTCCGGATCGAGCAGCAGGTTTTGCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCACACCGCCCAGGCCgc > 4:2581/1‑135 (MQ=255) ggAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCg > 8:49126/1‑135 (MQ=255) ccaccCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCCCTTTCCGGATCGAGCAGCAGGTTTTACAGGTAATGCAGG‑TTGGCCATGACCCCCGCCTCACCGCCCAGGCCGAACgg > 2:154336/1‑136 (MQ=255) caccCCG‑CCCGCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACggg < 2:14304/136‑1 (MQ=255) cccccGCCCCCCACCCTGC‑CCCAGTACGCGGAGCCCGGCGGGGGGCACCGGACCGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACggg < 6:199649/135‑1 (MQ=255) ccccG‑CCCTCACCCTGC‑ACCACTTCGAGGATCCCGGCGGGGGGCTGCGGCACGCGGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCGTCACCGCCCAGGCCGAACGGGCa < 5:282707/136‑1 (MQ=255) ccG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGc < 8:207945/136‑1 (MQ=255) cG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGCACGGGCAGCg > 2:88878/1‑136 (MQ=255) cG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCg > 2:10960/1‑136 (MQ=255) tCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCCGCGGCCCGCCCCGTTACGGGTCGAGCACCAGGGTTTGCAGGTAATGAAGG‑TTGGGCATTACCCCCGCCTCACCCCCCCGGCCCCACGGGCCGCGGTAgg > 4:11230/1‑135 (MQ=255) tCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGt > 4:245474/1‑136 (MQ=255) cccccTGC‑ACCACTTGCTGCACCCCGGCGGCGGGCCGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTc < 1:109007/134‑1 (MQ=255) cACCCTGC‑ACCCCTTCGAGGATCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTCGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTc < 8:234270/136‑1 (MQ=255) cACCCTGC‑ACCACTTCGCGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTc < 5:87993/136‑1 (MQ=255) cACCCTGC‑ACCAATTCGAGCAGCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTc < 2:269539/136‑1 (MQ=255) aCCCTCC‑CCCACTTGGCGCATCCCGGGGGCGGGCCGCGGCCCGCGGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGt < 1:94426/134‑1 (MQ=255) tGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCCGGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 8:145702/136‑1 (MQ=255) ggC‑ACCACTTCGAGGATCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 1:235944/135‑1 (MQ=255) c‑accagTTCGCCGAGCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACggg < 8:177227/136‑1 (MQ=255) c‑accacTTCGCGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 8:34890/134‑1 (MQ=255) c‑accacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 5:274449/134‑1 (MQ=255) c‑accacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 3:245474/134‑1 (MQ=255) c‑accacTGCGAGGATCACGGCGGGGGGCCGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACg < 7:48352/134‑1 (MQ=255) ccccacTTCGCGGATCCCGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAAAGGGCAGCGGTAGTCGTACg < 1:259229/132‑1 (MQ=255) ccacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCGTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCACG‑TTGGCCTTGACCCCGGCCTCACCGCCCCCGCCGCACCGGCAGCGGTAGTCGTAAGGGt > 1:124783/1‑135 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCTTTCCGGATCGAGCCGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGCACGGGCAGCGGTAGTCGTACGGGt > 5:66957/1‑134 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGCGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGt > 3:131793/1‑134 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGttt > 7:271256/1‑61 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGttt < 8:271256/61‑1 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGt > 5:110744/1‑134 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGt > 2:91451/1‑134 (MQ=255) cacTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTACAGGTAATGCAGG‑TTTGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGt > 3:113667/1‑134 (MQ=255) cacTTAGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGt > 8:71858/1‑134 (MQ=255) cTTCGAGGATCACGGCGGCGGGCAGCGGCCCGCCGCGTTACGGATCGAGCCGCAGGGTTTACAGGTAATTCAGG‑TTGGCCTTTACCCCCGCCTCACCCCCCCCGCCCCACCGGCAGCGGTAGTAGTACGGGTAAgg > 6:187860/1‑136 (MQ=255) tCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCa > 6:91828/1‑136 (MQ=255) tCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCa > 6:216122/1‑136 (MQ=255) tCGAGGATCACGGCGGCGGGCAGCGGCACCCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCa > 7:269542/1‑136 (MQ=255) cGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCCCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCAt > 4:17834/1‑136 (MQ=255) cGAGGATCACGGCGGCGGGCAGCGGCACGCCGCGTTGCGGATCGAGCAGCAGGTTTTGCAGGTAATTCAGG‑TTGGCCTTTACCCCCGCCTCACCGCCCACGCCGAACGGGCCGCGGGAGTCGTACGGGGTAGGCAt > 8:186584/1‑136 (MQ=255) gAGGATCACGGCGGCGGGCAGCCGCACGCCGCTTTCCGGATCGAGCATCAGGTTTTCAAGGTAATTCAGG‑TTGGCCTTGACCCCGGCCTCACCCCCCAGGCCGAACGGGCAGCCGTAGTCGTACGGGTAAGGCAt > 2:253693/1‑135 (MQ=255) gtcccccgggggcggGCCGCGGCCGCCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGGAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGaa < 4:188968/130‑1 (MQ=255) ggATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGaa > 6:209642/1‑136 (MQ=255) tcccggcggcggGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACt < 2:243702/132‑1 (MQ=255) ccggcgggggGCCGCGGCCCGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCa < 8:182800/135‑1 (MQ=255) ggcggcggGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACg < 5:120575/136‑1 (MQ=255) ggcggGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCg > 7:243/1‑136 (MQ=255) cgCGGCACGCCGCTTTCCGGAGCGAGCAGCAGGTTTTCCAGGTACTGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCGTTGCCGa < 1:268483/135‑1 (MQ=255) aGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGCCCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCGTTGcc > 7:134130/1‑134 (MQ=255) aGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCGTTGCCGa < 7:74355/136‑1 (MQ=255) | GGATCTCGTCGACGATCAACGCCACGCCCGCCTGCTCGGTAATGCGCCGCACGCCCTTGAGCCATTCGATGTCGGCCGGAACCACCCCG‑CCCTCACCCTGC‑ACCACTTCGAGGATCACGGCGGCGGGCAGCGGCACGCCGCTTTCCGGATCGAGCAGCAGGTTTTCCAGGTAATGCAGG‑TTGGCCTTGACCCCGGCCTCACCGCCCAGGCCGAACGGGCAGCGGTAGTCGTACGGGTAAGGCATGAACTGCACGCCGTTGCCGAGC > ACB143/4788802‑4789067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |