| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | 745525 = | 51 (0.970) | 3 (0.060) | 3/240 | 4.5 | 6.4% | coding (287/306 nt) | CJ019_00712 | hypothetical protein |
| ? | ACB143 | = 745521 | 41 (0.840) | coding (291/306 nt) | CJ019_00712 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGGGTCAAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/745670‑745525‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgatgaAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTGG < ACB143/745521‑745386 TGGGTCAAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATATGATTGAGTACAATCCTGATGAC‑GGGGTCATTACTAT > 4:222808/1‑137 tGTCAAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATG < 2:242140/136‑1 GGTCAAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATG < 8:146682/137‑1 AAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATGATGA < 8:253253/137‑1 ATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATGATGATGAAGGGGACGAGCGCTGAGCTTAATTGCA < 8:88208/106‑1 ATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATGATGATGAAGGGGACGAGCGCTGAGCTTAATTGCA > 7:88208/1‑106 atTATGATGATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAAC < 1:317905/135‑1 TGATGATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATGTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTAACAGCCAGTAAACTCCG > 8:168715/1‑137 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCC > 4:153679/1‑137 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCC > 6:141024/1‑137 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCC > 6:182709/1‑137 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCC > 6:256602/1‑137 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCG < 6:173457/101‑1 ATGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCG > 5:173457/1‑101 TGAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCT < 2:109178/137‑1 GAAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTG > 1:73250/1‑137 AAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTGG > 2:214327/1‑137 AAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTGG > 8:181367/1‑137 AAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTGG > 8:60704/1‑137 TGGGTCAAAGAGGTCGGTTTCCGCAAGGAGATCAACGGGCTGAAAAACGAACTGGGCAAGGCTCACGATTACATCGCAGATCTCGCCGATCAGCTCAATCTGATTGAGTACAATCCTGATGACGGGGGTCATTACTATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < ACB143/745670‑745525‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgatgaAGGGGACGAGCGCTGAGCTTAATTGCACATGATTTCTGGACGCTAGGGTCTGTGTGAAAAGCCTTGATGCTCGATGATGCTGCGTTGAAAACAGCCGCAGAATGCTCGGTTACAGCCAGTAAACTCCGCTTCCTGG < ACB143/745521‑745386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |