New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	ACB143	= 205219	59 (0.990)	3 (0.050)	3/248	6.8	4.9%	coding (20078/28449 nt)	CJ019_00185	hypothetical protein
	?	ACB143	= 2457736	60 (1.050)					coding (939/1350 nt)	cusS_2	Sensor histidine kinase CusS
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/205080‑205219 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggaTGCGCTGCTGGAGTACTACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAGCATATGCTGCGCCGGGCGCTGTCCAACCTGCTGGACAACGCCA  <  ACB143/2457736‑2457606                                                                                                                                                                                                                                                                                 gTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGT                                                                                                                                        <  1:273932/136‑1                                                                                                 AACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCGCTGCTGGAGTACTACGCGC                                                                                                              >  7:83762/1‑67                                                                                                 AACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCGCTGCTGGAGTACTACGCGC                                                                                                              <  8:83762/67‑1                                                                                                                                      CGGTGGATGCGCTGCTGGAGTACTACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAGCATATGCTGCGCCGGGCGCTGTCCAACCTGCTGGACAACGCC   <  6:174981/137‑1                                                                                                                                       GGTGGATGCGCTGCTGGAGTACTACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAGCATATGCTGCGCCGGGCGCTGTCCAACCTGCTGGACAACGCCA  >  8:222349/1‑137                                                                                                                                            ATGCGCTGCTGGAGTACTACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAG                                             >  5:33809/1‑89                                                                                                                                            ATGCGCTGCTGGAGTACAACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAG                                             <  6:33809/89‑1                                                                                                                                                                                                                                                                                 CTGGTCGTGACCCTGAGCAACAATGCCCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  ACB143/205080‑205219 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggaTGCGCTGCTGGAGTACTACGCGCCTCTGGCAGAAGACAGCGACGTGCAGATGCTGCGCGAGGGTGAAGCGGTGCTGCACGGCGACCAGCATATGCTGCGCCGGGCGCTGTCCAACCTGCTGGACAACGCCA  <  ACB143/2457736‑2457606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.